| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is yaeQ [H]
Identifier: 74316698
GI number: 74316698
Start: 721178
End: 721786
Strand: Direct
Name: yaeQ [H]
Synonym: Tbd_0680
Alternate gene names: 74316698
Gene position: 721178-721786 (Clockwise)
Preceding gene: 74316697
Following gene: 74316701
Centisome position: 24.78
GC content: 64.7
Gene sequence:
>609_bases ATGGGTATTCCCGAAATTTACGGCCGTCGTGCGGTGTCCTACGCCGCGGTGTGCAGGAATTCGACCATGGCGCTCAAGGC CACCATCTACAAAGCCGACCTTCAGGTCGCCGACATGGACCGCCACGTCTACGGCGACCATGCGCTCACCCTTGCAAGAC ACCCCTCCGAGTCCGAGGAACGCATGATGGTGCGTGTCCTGGCCTATGCGCTCCACGCGCAGGACGGTATCGCGTTCACG AAGGGGCTGTTCGACGTCGACGAACCCGAGGTCTGGGTCAAGAACCTCGCCGGCGAGATCACGCTTTGGATAGACCTCGG TCAGCCTGACGAGGCGCGCATCCGCCGCGCGTGCAGCCGCGCCGCGCAGGTCGTCGTACTGTGCTACAGCAGCAGCTGCG AGGTCTGGTGGAAACAGATCGCCGGCAAGCTCGCGCGCTTCAGCAATCTGACTGTGCTGCAGCTCGCGGCCGATACCGCA CAGGCGCTCGCCGGCCTCGCGACGCGCGGGATGCGCCTGCAATGCATGGTGCAGGACGGCGAAATCTGGCTCAACAGCGA GACCGAGAGCGTGGCGGTGAAGCTGACTGCGCTCATGTCGCCGCGCTGA
Upstream 100 bases:
>100_bases GTGACGACTGGCCCCAAGGGCAAGCAGGCGTCGAACATCCAGGTCGTGTCGTAATCCTTCCGACCTGATGTGAAAAACCC CGGTTCGCCGGGGTTTTTTT
Downstream 100 bases:
>100_bases GCCCTCATTTGGCGGACGGACAGTTCTCGACACACACCGTTTCGCTGACGCGCTGCCCGCCGCAGCCGAGGAAGCAGCTA TCGTAGGCGGGCAGGCAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MGIPEIYGRRAVSYAAVCRNSTMALKATIYKADLQVADMDRHVYGDHALTLARHPSESEERMMVRVLAYALHAQDGIAFT KGLFDVDEPEVWVKNLAGEITLWIDLGQPDEARIRRACSRAAQVVVLCYSSSCEVWWKQIAGKLARFSNLTVLQLAADTA QALAGLATRGMRLQCMVQDGEIWLNSETESVAVKLTALMSPR
Sequences:
>Translated_202_residues MGIPEIYGRRAVSYAAVCRNSTMALKATIYKADLQVADMDRHVYGDHALTLARHPSESEERMMVRVLAYALHAQDGIAFT KGLFDVDEPEVWVKNLAGEITLWIDLGQPDEARIRRACSRAAQVVVLCYSSSCEVWWKQIAGKLARFSNLTVLQLAADTA QALAGLATRGMRLQCMVQDGEIWLNSETESVAVKLTALMSPR >Mature_201_residues GIPEIYGRRAVSYAAVCRNSTMALKATIYKADLQVADMDRHVYGDHALTLARHPSESEERMMVRVLAYALHAQDGIAFTK GLFDVDEPEVWVKNLAGEITLWIDLGQPDEARIRRACSRAAQVVVLCYSSSCEVWWKQIAGKLARFSNLTVLQLAADTAQ ALAGLATRGMRLQCMVQDGEIWLNSETESVAVKLTALMSPR
Specific function: Unknown
COG id: COG4681
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786388, Length=180, Percent_Identity=47.7777777777778, Blast_Score=177, Evalue=3e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009822 [H]
Pfam domain/function: PF07152 YaeQ [H]
EC number: NA
Molecular weight: Translated: 22388; Mature: 22257
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIPEIYGRRAVSYAAVCRNSTMALKATIYKADLQVADMDRHVYGDHALTLARHPSESEE CCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEECCEEECCCCEEECCCEEEEECCCCCHHH RMMVRVLAYALHAQDGIAFTKGLFDVDEPEVWVKNLAGEITLWIDLGQPDEARIRRACSR HHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHH AAQVVVLCYSSSCEVWWKQIAGKLARFSNLTVLQLAADTAQALAGLATRGMRLQCMVQDG HHEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHCCCCEEEEEEECC EIWLNSETESVAVKLTALMSPR EEEECCCCCEEEEEEEEECCCC >Mature Secondary Structure GIPEIYGRRAVSYAAVCRNSTMALKATIYKADLQVADMDRHVYGDHALTLARHPSESEE CCCHHHHHHHHHHHHHHCCCCEEEEEEEEEECCEEECCCCEEECCCEEEEECCCCCHHH RMMVRVLAYALHAQDGIAFTKGLFDVDEPEVWVKNLAGEITLWIDLGQPDEARIRRACSR HHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHH AAQVVVLCYSSSCEVWWKQIAGKLARFSNLTVLQLAADTAQALAGLATRGMRLQCMVQDG HHEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHCCCCEEEEEEECC EIWLNSETESVAVKLTALMSPR EEEECCCCCEEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]