| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is kbl [C]
Identifier: 74316687
GI number: 74316687
Start: 709675
End: 711015
Strand: Reverse
Name: kbl [C]
Synonym: Tbd_0669
Alternate gene names: 74316687
Gene position: 711015-709675 (Counterclockwise)
Preceding gene: 74316690
Following gene: 74316686
Centisome position: 24.44
GC content: 63.24
Gene sequence:
>1341_bases ATGGCCACATGTCCAGATTGTTTCTGCCGTGTGGACTCCTACATTTCAGCATCGTCGCATGGGCCCATGGGACACGTACA CGAACATCCGAAGGACGTACAGGAGACCACCATGAACGATTTAGCCCCGGTCGAAGACGCGATGCTCAATGGCGATTTGT TTGCGAAAGCCTTTGTCGCGAGGAAACACAGCGCACTGAACCGCGTGAAACCGGAATACCTCGCGCTGGCCATGCGCAAG ATCGATGCCGTGAGCGAACGTGAAGTCGTCTTCGCGGGGCGCCGGATGCTCATGCTGTCGTCCAACAACTATCTCGGACT GGCGAGCGACCCTCGCCTCTCGCAGGCCGGCGTCGAGGCGATCCGCTACTGGGGCAACAGCACCAGCGGCAGCCGGCTGC TCAACGGGACCAACGACCTGCACGAGGAACTCGAACGCAAGCTGTCATGGTTCAAGCAGGTCGAAACGGTCGTCGCCTTC CAGAGCGGCTACATGGCGAATCTCGGCGTGCTGAGCGCGCTGCTCTCGAAAGACGACGTCGCGATCGTCGACAAGCTCGT GCACGCCAGCATCCTCGACGGGTGCGCGCTCGCCCATGCGCAGGTGCGCAGCTTTCGCCACCAGGACATGGCGTCGCTCG AGCGCGTCCTCAACGACGTCGGACACAAGGCGAACAAGCTCATCGTAGTCGACGGCATCTACAGCATGGACGGCGATTTT GCGCGGCTGCCCGAGATCATGGCGCTCGCGCGGCGCTACGGCGCGCGCGTGATGGTCGACGACGCGCACGCGACCGGCGT CGCCGGGCCGCACGGACGCGGCACCGCCGATCATTTCGGCATCGACGAGCCCGACATCATCACCGGCACGCTGTCCAAGG CCTTCGGCTGCATCGGCGGCTTCGTCGGCGCCACGAAGGAGGTGATGGACTTCATCAAGTACAACTCGCACGCCTTCATC TATTCGACCAGCATCAGCCCGTCGGTCACGGCCTCGCTGATCCGGGCCGTACGCATCATCGAGGACGAGCCGCAGAAGCG CGTCAACCTGTGGGCCTGCACCCACCACCTGCTGAGCGGGCTGAAATCGCTCGGCTTCGATACCGGCGTGAGCGAAACGC CGATCATCCCGATCGTGCTCGGCGATGAAATCACGATGTTCGAACTGGTCGCGCGCATGGACGCCGACGACATCTTCGCG AGCCCGGTGATCTATCCGGCGTGTCCCCGCAACAAGCCGCGCGTACGCATCAGCCTCTGTGCCGAGCACACCCTTTCGGA CATGGACCGGGTGCTCGATTCGGTCTCGCGCCACGGCCGCGACCTCGGCATCATCCAGTAA
Upstream 100 bases:
>100_bases AAAAATATAACACCTGTGCTACCCGCTCACCATGTCCCATTCGTCTAGGTCGGCTGCGTTTCCATCTAGCCATCCGGGTG GGGTCGCGTCTCCCCCTTTG
Downstream 100 bases:
>100_bases CGGGAGGCCGTCATGTCGGAAACGATCGCCGCGCGGCTGCTGACGCTGCACGACCGGCTGGCGCGGGCCGCACTCGACTG CGCGCGTGATCCGCGCGCCG
Product: glycine C-acetyltransferase
Products: NA
Alternate protein names: AONS/AKB ligase; 7-keto-8-amino-pelargonic acid synthase; 7-KAP synthase; KAPA synthase; 8-amino-7-ketopelargonate synthase; Alpha-oxoamine synthase; L-alanine--pimeloyl-CoA ligase [H]
Number of amino acids: Translated: 446; Mature: 445
Protein sequence:
>446_residues MATCPDCFCRVDSYISASSHGPMGHVHEHPKDVQETTMNDLAPVEDAMLNGDLFAKAFVARKHSALNRVKPEYLALAMRK IDAVSEREVVFAGRRMLMLSSNNYLGLASDPRLSQAGVEAIRYWGNSTSGSRLLNGTNDLHEELERKLSWFKQVETVVAF QSGYMANLGVLSALLSKDDVAIVDKLVHASILDGCALAHAQVRSFRHQDMASLERVLNDVGHKANKLIVVDGIYSMDGDF ARLPEIMALARRYGARVMVDDAHATGVAGPHGRGTADHFGIDEPDIITGTLSKAFGCIGGFVGATKEVMDFIKYNSHAFI YSTSISPSVTASLIRAVRIIEDEPQKRVNLWACTHHLLSGLKSLGFDTGVSETPIIPIVLGDEITMFELVARMDADDIFA SPVIYPACPRNKPRVRISLCAEHTLSDMDRVLDSVSRHGRDLGIIQ
Sequences:
>Translated_446_residues MATCPDCFCRVDSYISASSHGPMGHVHEHPKDVQETTMNDLAPVEDAMLNGDLFAKAFVARKHSALNRVKPEYLALAMRK IDAVSEREVVFAGRRMLMLSSNNYLGLASDPRLSQAGVEAIRYWGNSTSGSRLLNGTNDLHEELERKLSWFKQVETVVAF QSGYMANLGVLSALLSKDDVAIVDKLVHASILDGCALAHAQVRSFRHQDMASLERVLNDVGHKANKLIVVDGIYSMDGDF ARLPEIMALARRYGARVMVDDAHATGVAGPHGRGTADHFGIDEPDIITGTLSKAFGCIGGFVGATKEVMDFIKYNSHAFI YSTSISPSVTASLIRAVRIIEDEPQKRVNLWACTHHLLSGLKSLGFDTGVSETPIIPIVLGDEITMFELVARMDADDIFA SPVIYPACPRNKPRVRISLCAEHTLSDMDRVLDSVSRHGRDLGIIQ >Mature_445_residues ATCPDCFCRVDSYISASSHGPMGHVHEHPKDVQETTMNDLAPVEDAMLNGDLFAKAFVARKHSALNRVKPEYLALAMRKI DAVSEREVVFAGRRMLMLSSNNYLGLASDPRLSQAGVEAIRYWGNSTSGSRLLNGTNDLHEELERKLSWFKQVETVVAFQ SGYMANLGVLSALLSKDDVAIVDKLVHASILDGCALAHAQVRSFRHQDMASLERVLNDVGHKANKLIVVDGIYSMDGDFA RLPEIMALARRYGARVMVDDAHATGVAGPHGRGTADHFGIDEPDIITGTLSKAFGCIGGFVGATKEVMDFIKYNSHAFIY STSISPSVTASLIRAVRIIEDEPQKRVNLWACTHHLLSGLKSLGFDTGVSETPIIPIVLGDEITMFELVARMDADDIFAS PVIYPACPRNKPRVRISLCAEHTLSDMDRVLDSVSRHGRDLGIIQ
Specific function: Catalyzes the decarboxylative condensation of pimeloyl- CoA and L-alanine to produce 8-amino-7-oxononanoate (AON), coenzyme A and/or converts 2-amino-3-ketobutyrate to glycine and acetyl-CoA [H]
COG id: COG0156
COG function: function code H; 7-keto-8-aminopelargonate synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI7657118, Length=352, Percent_Identity=36.9318181818182, Blast_Score=226, Evalue=2e-59, Organism=Homo sapiens, GI284448556, Length=352, Percent_Identity=36.9318181818182, Blast_Score=226, Evalue=3e-59, Organism=Homo sapiens, GI4758668, Length=363, Percent_Identity=32.7823691460055, Blast_Score=202, Evalue=7e-52, Organism=Homo sapiens, GI119220554, Length=371, Percent_Identity=30.9973045822102, Blast_Score=191, Evalue=2e-48, Organism=Homo sapiens, GI83977440, Length=360, Percent_Identity=29.4444444444444, Blast_Score=169, Evalue=4e-42, Organism=Homo sapiens, GI83977442, Length=360, Percent_Identity=29.4444444444444, Blast_Score=169, Evalue=4e-42, Organism=Homo sapiens, GI83977444, Length=360, Percent_Identity=29.4444444444444, Blast_Score=169, Evalue=5e-42, Organism=Homo sapiens, GI5454084, Length=307, Percent_Identity=28.9902280130293, Blast_Score=152, Evalue=8e-37, Organism=Homo sapiens, GI4502025, Length=368, Percent_Identity=28.2608695652174, Blast_Score=149, Evalue=3e-36, Organism=Homo sapiens, GI40316939, Length=368, Percent_Identity=28.2608695652174, Blast_Score=149, Evalue=3e-36, Organism=Escherichia coli, GI1790046, Length=385, Percent_Identity=33.5064935064935, Blast_Score=231, Evalue=1e-61, Organism=Escherichia coli, GI1786993, Length=355, Percent_Identity=30.9859154929577, Blast_Score=181, Evalue=6e-47, Organism=Caenorhabditis elegans, GI71994529, Length=361, Percent_Identity=32.409972299169, Blast_Score=214, Evalue=6e-56, Organism=Caenorhabditis elegans, GI32566772, Length=367, Percent_Identity=32.425068119891, Blast_Score=197, Evalue=1e-50, Organism=Caenorhabditis elegans, GI17560912, Length=371, Percent_Identity=32.0754716981132, Blast_Score=173, Evalue=1e-43, Organism=Caenorhabditis elegans, GI17560914, Length=371, Percent_Identity=32.0754716981132, Blast_Score=173, Evalue=2e-43, Organism=Caenorhabditis elegans, GI71982625, Length=391, Percent_Identity=25.5754475703325, Blast_Score=134, Evalue=8e-32, Organism=Caenorhabditis elegans, GI71982617, Length=391, Percent_Identity=25.5754475703325, Blast_Score=134, Evalue=9e-32, Organism=Saccharomyces cerevisiae, GI6320267, Length=365, Percent_Identity=32.8767123287671, Blast_Score=186, Evalue=5e-48, Organism=Saccharomyces cerevisiae, GI6320438, Length=402, Percent_Identity=29.6019900497512, Blast_Score=169, Evalue=1e-42, Organism=Saccharomyces cerevisiae, GI6323954, Length=255, Percent_Identity=29.0196078431373, Blast_Score=125, Evalue=2e-29, Organism=Drosophila melanogaster, GI24662918, Length=374, Percent_Identity=32.3529411764706, Blast_Score=224, Evalue=8e-59, Organism=Drosophila melanogaster, GI17136286, Length=370, Percent_Identity=33.2432432432432, Blast_Score=192, Evalue=4e-49, Organism=Drosophila melanogaster, GI17137420, Length=353, Percent_Identity=30.028328611898, Blast_Score=162, Evalue=6e-40, Organism=Drosophila melanogaster, GI24653280, Length=299, Percent_Identity=26.4214046822742, Blast_Score=134, Evalue=9e-32, Organism=Drosophila melanogaster, GI24653276, Length=299, Percent_Identity=26.4214046822742, Blast_Score=134, Evalue=9e-32, Organism=Drosophila melanogaster, GI24653278, Length=299, Percent_Identity=26.4214046822742, Blast_Score=134, Evalue=9e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR004723 - InterPro: IPR010962 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.3.1.29; =2.3.1.47 [H]
Molecular weight: Translated: 48833; Mature: 48702
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00028 ZINC_FINGER_C2H2_1 ; PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATCPDCFCRVDSYISASSHGPMGHVHEHPKDVQETTMNDLAPVEDAMLNGDLFAKAFVA CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCHHHHHHHHH RKHSALNRVKPEYLALAMRKIDAVSEREVVFAGRRMLMLSSNNYLGLASDPRLSQAGVEA HHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHCCCEEEEEECCCEEECCCCCCHHHHHHHH IRYWGNSTSGSRLLNGTNDLHEELERKLSWFKQVETVVAFQSGYMANLGVLSALLSKDDV HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHH AIVDKLVHASILDGCALAHAQVRSFRHQDMASLERVLNDVGHKANKLIVVDGIYSMDGDF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCH ARLPEIMALARRYGARVMVDDAHATGVAGPHGRGTADHFGIDEPDIITGTLSKAFGCIGG HHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHH FVGATKEVMDFIKYNSHAFIYSTSISPSVTASLIRAVRIIEDEPQKRVNLWACTHHLLSG HHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH LKSLGFDTGVSETPIIPIVLGDEITMFELVARMDADDIFASPVIYPACPRNKPRVRISLC HHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCHHHHHCCCCEECCCCCCCCCEEEEEH AEHTLSDMDRVLDSVSRHGRDLGIIQ HHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure ATCPDCFCRVDSYISASSHGPMGHVHEHPKDVQETTMNDLAPVEDAMLNGDLFAKAFVA CCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCHHHHHHHHH RKHSALNRVKPEYLALAMRKIDAVSEREVVFAGRRMLMLSSNNYLGLASDPRLSQAGVEA HHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHCCCEEEEEECCCEEECCCCCCHHHHHHHH IRYWGNSTSGSRLLNGTNDLHEELERKLSWFKQVETVVAFQSGYMANLGVLSALLSKDDV HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHH AIVDKLVHASILDGCALAHAQVRSFRHQDMASLERVLNDVGHKANKLIVVDGIYSMDGDF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCH ARLPEIMALARRYGARVMVDDAHATGVAGPHGRGTADHFGIDEPDIITGTLSKAFGCIGG HHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHH FVGATKEVMDFIKYNSHAFIYSTSISPSVTASLIRAVRIIEDEPQKRVNLWACTHHLLSG HHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH LKSLGFDTGVSETPIIPIVLGDEITMFELVARMDADDIFASPVIYPACPRNKPRVRISLC HHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCHHHHHCCCCEECCCCCCCCCEEEEEH AEHTLSDMDRVLDSVSRHGRDLGIIQ HHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA