| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316685
Identifier: 74316685
GI number: 74316685
Start: 707785
End: 708936
Strand: Reverse
Name: 74316685
Synonym: Tbd_0667
Alternate gene names: NA
Gene position: 708936-707785 (Counterclockwise)
Preceding gene: 74316686
Following gene: 74316683
Centisome position: 24.36
GC content: 64.15
Gene sequence:
>1152_bases ATGCATGTCCGCGTGTATTCGTCGATAGACGAGATCGAGCCTCGCGCCTGGGACGAAATTCTCGGTCGCGACGCCACGAT CTGCTCCCATGCCTACCTCAAGGCAGTCGAAGGCAGCGCAATCAACGACTGCCTGTTCCGCTACCCGGTGGTGTACGACG ACGCCGGCCGCGTGCTGGCGCATACCTGCATGTTTTCGATCAGCATGGACATGGCGCTGTTTGCACAGGGCGCCGTGCGC GCCCTCGTGGGCGCGGTGCGCCGCGTCTTCCCGCGGTTTCTGACCCTGCGCATGCTCGAATGCGGCACGCCTGTCGCGCT CGGGCGTCAGATCACGCTGCGCGACGACGCGGACGCGGAACAGGTCCTCGCCCAGCTGGTCGCGGCGGCCGAGACGATCG CCGAAGCGGCGGGGCTGAACTACCTGCTGTTCCGGGATTACCGTAACGAGGAGCGGGGCCGCTTCGACGCGCTGACCGCG CACGGCTACAGCGTCCTGCCCAACCTGCCCGACGCCGTGCTCGAGGTACGCTGGCGCAGCTTCGACACCTACCTGGCCGA CATGCGCAGCAGCTACCGCCGCAAGGTCAGGCTCAATCTCTCACGCATCGCAGACCGCGGGATCCGCAGCGAGCTTCTGA CCGACTTTCGCCATCTGGCCGACGTCTTCGCCGCGCAGTGGCGATACATCTATGACCATGCCAGCGAATACAAGCGCGAA ATTCTCACCCCGGCCTTCTACCGGAACATCAACACGCACCTGCCGGGTTCGCGCGTTCTCGTGTTCTATCAGCAGGACAG GCTCATCGGCCACTGCCTGCTGCTCGTCGAGGATGATGTGTTGCGCTGGATGTACGTCGGCAAGGACGGCGAGGAAGCCG AAGACGTCTACCCGTTCATGCTGTACGAAATCGTCCGTCACGCCATCGAGGCCGGCCTGCGCTGGGTCAAGCTCGGCATC ACGACCTACGTCGCGAAAACCGATCTCGGGGCGGAAATGGTGCCGCTCTACATGTACATGAAACACCGCACGCGGCTGTT TCCGAAGCTGTCGCCCTGGCTATTCCGCCGGATGACGCCGCTTCCGCCGCAGTTCGCCAAAAGCGTGTTCAGGCGCGAGA CGGGAAGGCTTCCGACGGCGGTATCACCGTAG
Upstream 100 bases:
>100_bases GATCGCGGAAGGGGCGACGATCGTGCGCATCGGCACGGCGATTTTCGGCCCGCGCTTCTATCCCGAGCTGGCCGCGCACC GGTAGCGGGAGCCTCACGTC
Downstream 100 bases:
>100_bases CGCCCACGGCCGGGCGCGCGCCGGGTCGGCTCAGTCCAGCCGTGCGGGCACGATCGGAACGCCGCTCGCGACATCGCCGC ACTGCGCGCGGTGGCGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 383; Mature: 383
Protein sequence:
>383_residues MHVRVYSSIDEIEPRAWDEILGRDATICSHAYLKAVEGSAINDCLFRYPVVYDDAGRVLAHTCMFSISMDMALFAQGAVR ALVGAVRRVFPRFLTLRMLECGTPVALGRQITLRDDADAEQVLAQLVAAAETIAEAAGLNYLLFRDYRNEERGRFDALTA HGYSVLPNLPDAVLEVRWRSFDTYLADMRSSYRRKVRLNLSRIADRGIRSELLTDFRHLADVFAAQWRYIYDHASEYKRE ILTPAFYRNINTHLPGSRVLVFYQQDRLIGHCLLLVEDDVLRWMYVGKDGEEAEDVYPFMLYEIVRHAIEAGLRWVKLGI TTYVAKTDLGAEMVPLYMYMKHRTRLFPKLSPWLFRRMTPLPPQFAKSVFRRETGRLPTAVSP
Sequences:
>Translated_383_residues MHVRVYSSIDEIEPRAWDEILGRDATICSHAYLKAVEGSAINDCLFRYPVVYDDAGRVLAHTCMFSISMDMALFAQGAVR ALVGAVRRVFPRFLTLRMLECGTPVALGRQITLRDDADAEQVLAQLVAAAETIAEAAGLNYLLFRDYRNEERGRFDALTA HGYSVLPNLPDAVLEVRWRSFDTYLADMRSSYRRKVRLNLSRIADRGIRSELLTDFRHLADVFAAQWRYIYDHASEYKRE ILTPAFYRNINTHLPGSRVLVFYQQDRLIGHCLLLVEDDVLRWMYVGKDGEEAEDVYPFMLYEIVRHAIEAGLRWVKLGI TTYVAKTDLGAEMVPLYMYMKHRTRLFPKLSPWLFRRMTPLPPQFAKSVFRRETGRLPTAVSP >Mature_383_residues MHVRVYSSIDEIEPRAWDEILGRDATICSHAYLKAVEGSAINDCLFRYPVVYDDAGRVLAHTCMFSISMDMALFAQGAVR ALVGAVRRVFPRFLTLRMLECGTPVALGRQITLRDDADAEQVLAQLVAAAETIAEAAGLNYLLFRDYRNEERGRFDALTA HGYSVLPNLPDAVLEVRWRSFDTYLADMRSSYRRKVRLNLSRIADRGIRSELLTDFRHLADVFAAQWRYIYDHASEYKRE ILTPAFYRNINTHLPGSRVLVFYQQDRLIGHCLLLVEDDVLRWMYVGKDGEEAEDVYPFMLYEIVRHAIEAGLRWVKLGI TTYVAKTDLGAEMVPLYMYMKHRTRLFPKLSPWLFRRMTPLPPQFAKSVFRRETGRLPTAVSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44146; Mature: 44146
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHVRVYSSIDEIEPRAWDEILGRDATICSHAYLKAVEGSAINDCLFRYPVVYDDAGRVLA CEEEEECCHHHCCCHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCEEECCCHHHHH HTCMFSISMDMALFAQGAVRALVGAVRRVFPRFLTLRMLECGTPVALGRQITLRDDADAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHH QVLAQLVAAAETIAEAAGLNYLLFRDYRNEERGRFDALTAHGYSVLPNLPDAVLEVRWRS HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHEECCCCCCCCCCCHHHHHHHHHH FDTYLADMRSSYRRKVRLNLSRIADRGIRSELLTDFRHLADVFAAQWRYIYDHASEYKRE HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILTPAFYRNINTHLPGSRVLVFYQQDRLIGHCLLLVEDDVLRWMYVGKDGEEAEDVYPFM HCCHHHHHCCCCCCCCCEEEEEEECCCHHHHHHEEEEHHHEEEEEECCCCCCHHHHHHHH LYEIVRHAIEAGLRWVKLGITTYVAKTDLGAEMVPLYMYMKHRTRLFPKLSPWLFRRMTP HHHHHHHHHHHCHHEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCC LPPQFAKSVFRRETGRLPTAVSP CCHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MHVRVYSSIDEIEPRAWDEILGRDATICSHAYLKAVEGSAINDCLFRYPVVYDDAGRVLA CEEEEECCHHHCCCHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCEEECCCHHHHH HTCMFSISMDMALFAQGAVRALVGAVRRVFPRFLTLRMLECGTPVALGRQITLRDDADAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCCHH QVLAQLVAAAETIAEAAGLNYLLFRDYRNEERGRFDALTAHGYSVLPNLPDAVLEVRWRS HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHEECCCCCCCCCCCHHHHHHHHHH FDTYLADMRSSYRRKVRLNLSRIADRGIRSELLTDFRHLADVFAAQWRYIYDHASEYKRE HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILTPAFYRNINTHLPGSRVLVFYQQDRLIGHCLLLVEDDVLRWMYVGKDGEEAEDVYPFM HCCHHHHHCCCCCCCCCEEEEEEECCCHHHHHHEEEEHHHEEEEEECCCCCCHHHHHHHH LYEIVRHAIEAGLRWVKLGITTYVAKTDLGAEMVPLYMYMKHRTRLFPKLSPWLFRRMTP HHHHHHHHHHHCHHEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCC LPPQFAKSVFRRETGRLPTAVSP CCHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA