Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is yfgM [C]

Identifier: 74316614

GI number: 74316614

Start: 624993

End: 625634

Strand: Direct

Name: yfgM [C]

Synonym: Tbd_0596

Alternate gene names: 74316614

Gene position: 624993-625634 (Clockwise)

Preceding gene: 74316613

Following gene: 74316615

Centisome position: 21.48

GC content: 66.36

Gene sequence:

>642_bases
ATGGCAACCTACGACCTCGATGAACAGGAACGGCTCGACGAACTGAAAGCCTGGTGGAAACGCTGGGGCAGCGTCTCAAT
GATCGGGCTGGCGGTGTTGATCGCCGCCGCGGCGGGCTGGCGCTACTGGCAAAACCGCACCGTCACGCAGAGCCTCGAGG
CCGCGGCGGTCTACGACCAGCTCGCGCGCTCGGTCGCGGCGAACGAGGTCAAGGGCGCACGCGAAGCCGGCGCGATGCTC
ATCGACAAATACAAGGACACGGCCTACGCTCCGCGTGCCGCGCTGCTTCTGGCCAGGCTCAACGTCGGCGCCAAGGACGC
GAAGAGCGCGCAGACTCAGCTCGAGTGGGCCGCCAGCCACAGCAAGGAACCGGCGATCAGGGATTTGGCCCGCCTGCGTC
TCGCCGCCGTTCAGCTTGACCAAAAGCAATACGACGTCGCGCTGAAGACGCTCGCGGCGCGTCACAGCGACGCCTTCGGC
CCGCGCTTCGACGACCTCAGGGGTGACGTGCTCGTCGCACAGAACAAGCCTGCCGACGCGCGCAAGGCGTATCAGGCCGC
CCTGGGCGCGATGAGCGCCGACAATCCCTACCGCAACGTGGTCGAACTGAAGCTCGACGGCGTAGGAGGAGAAGCCAAGT
GA

Upstream 100 bases:

>100_bases
GGCGCAGCAGGTGAGCGTGAAACCGCTGCGCGGCACGGCGGAGCAGACCCGCGTCGAACTCGCGCTCGCAATCGAATATC
TGAAAAAGGCATAAGCACCC

Downstream 100 bases:

>100_bases
AAATTCGTCTGCTCGTCGTCGCCGGCATCGCGCTGGCCACCTCCGGCTGCACCACGATCGGCGGCTGGTTCGGCTCCGGT
CCGTCCCGCCCCGAGCCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MATYDLDEQERLDELKAWWKRWGSVSMIGLAVLIAAAAGWRYWQNRTVTQSLEAAAVYDQLARSVAANEVKGAREAGAML
IDKYKDTAYAPRAALLLARLNVGAKDAKSAQTQLEWAASHSKEPAIRDLARLRLAAVQLDQKQYDVALKTLAARHSDAFG
PRFDDLRGDVLVAQNKPADARKAYQAALGAMSADNPYRNVVELKLDGVGGEAK

Sequences:

>Translated_213_residues
MATYDLDEQERLDELKAWWKRWGSVSMIGLAVLIAAAAGWRYWQNRTVTQSLEAAAVYDQLARSVAANEVKGAREAGAML
IDKYKDTAYAPRAALLLARLNVGAKDAKSAQTQLEWAASHSKEPAIRDLARLRLAAVQLDQKQYDVALKTLAARHSDAFG
PRFDDLRGDVLVAQNKPADARKAYQAALGAMSADNPYRNVVELKLDGVGGEAK
>Mature_212_residues
ATYDLDEQERLDELKAWWKRWGSVSMIGLAVLIAAAAGWRYWQNRTVTQSLEAAAVYDQLARSVAANEVKGAREAGAMLI
DKYKDTAYAPRAALLLARLNVGAKDAKSAQTQLEWAASHSKEPAIRDLARLRLAAVQLDQKQYDVALKTLAARHSDAFGP
RFDDLRGDVLVAQNKPADARKAYQAALGAMSADNPYRNVVELKLDGVGGEAK

Specific function: Unknown

COG id: COG2976

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0070 family [H]

Homologues:

Organism=Escherichia coli, GI1788860, Length=188, Percent_Identity=27.1276595744681, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018704
- InterPro:   IPR011990 [H]

Pfam domain/function: PF09976 DUF2133 [H]

EC number: NA

Molecular weight: Translated: 23343; Mature: 23211

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATYDLDEQERLDELKAWWKRWGSVSMIGLAVLIAAAAGWRYWQNRTVTQSLEAAAVYDQ
CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LARSVAANEVKGAREAGAMLIDKYKDTAYAPRAALLLARLNVGAKDAKSAQTQLEWAASH
HHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC
SKEPAIRDLARLRLAAVQLDQKQYDVALKTLAARHSDAFGPRFDDLRGDVLVAQNKPADA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCHH
RKAYQAALGAMSADNPYRNVVELKLDGVGGEAK
HHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCC
>Mature Secondary Structure 
ATYDLDEQERLDELKAWWKRWGSVSMIGLAVLIAAAAGWRYWQNRTVTQSLEAAAVYDQ
CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LARSVAANEVKGAREAGAMLIDKYKDTAYAPRAALLLARLNVGAKDAKSAQTQLEWAASH
HHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC
SKEPAIRDLARLRLAAVQLDQKQYDVALKTLAARHSDAFGPRFDDLRGDVLVAQNKPADA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCHH
RKAYQAALGAMSADNPYRNVVELKLDGVGGEAK
HHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]