| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is ytwF [H]
Identifier: 74316591
GI number: 74316591
Start: 602991
End: 603320
Strand: Direct
Name: ytwF [H]
Synonym: Tbd_0573
Alternate gene names: 74316591
Gene position: 602991-603320 (Clockwise)
Preceding gene: 74316590
Following gene: 74316592
Centisome position: 20.72
GC content: 64.85
Gene sequence:
>330_bases ATGGTTGGACTGTCAGGCTTCAAGGAAGTGGATTCGGCTTATGTTGCAGAGCTTGCCGCCAAGGGCGCGCATTTGATCGA CGTGCGGACCGAGGCCGAGGTGGCGCAGGGCGTCATCGACGGCGCGATTCACATCCCCCTCCACCTGCTGCCCCTGCGTG CGGCCGACATCCCGCAGGACAAGCCTGTGGTGATCTACTGCCGCTCGGGCGCGCGCTCGGCGCAGGCATGCGCGTTCATG GCTTCCAAGGGTTATGGGAACATGCACAATCTCGCCGGCGGCATCATCGCCTGGGCACGCGCCGGACAGGCCATTCGCCC TGCCGGATAA
Upstream 100 bases:
>100_bases ATCACGGCGCGCAGCGCTGCTGATCGGTTCGCGGCCTTGGCCGCGGCGGGTGTCTGATGTATATTAGAGGGTTCTAATTT TCCATGCAGGAGTGACATCG
Downstream 100 bases:
>100_bases GGATGGGACGCCGGGACTACGCCAACTGGCTGATTTTGCCTATTGCGCGGCGATTTCGGTTGCAATAGGCAAACTTCTGG TTTAAGGTACCGCAGCGTTT
Product: rhodanese-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MVGLSGFKEVDSAYVAELAAKGAHLIDVRTEAEVAQGVIDGAIHIPLHLLPLRAADIPQDKPVVIYCRSGARSAQACAFM ASKGYGNMHNLAGGIIAWARAGQAIRPAG
Sequences:
>Translated_109_residues MVGLSGFKEVDSAYVAELAAKGAHLIDVRTEAEVAQGVIDGAIHIPLHLLPLRAADIPQDKPVVIYCRSGARSAQACAFM ASKGYGNMHNLAGGIIAWARAGQAIRPAG >Mature_109_residues MVGLSGFKEVDSAYVAELAAKGAHLIDVRTEAEVAQGVIDGAIHIPLHLLPLRAADIPQDKPVVIYCRSGARSAQACAFM ASKGYGNMHNLAGGIIAWARAGQAIRPAG
Specific function: Unknown. [C]
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 rhodanese domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001763 [H]
Pfam domain/function: PF00581 Rhodanese [H]
EC number: NA
Molecular weight: Translated: 11335; Mature: 11335
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGLSGFKEVDSAYVAELAAKGAHLIDVRTEAEVAQGVIDGAIHIPLHLLPLRAADIPQD CCCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCEEECCEEEEECCCCCCCCC KPVVIYCRSGARSAQACAFMASKGYGNMHNLAGGIIAWARAGQAIRPAG CCEEEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MVGLSGFKEVDSAYVAELAAKGAHLIDVRTEAEVAQGVIDGAIHIPLHLLPLRAADIPQD CCCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCEEECCEEEEECCCCCCCCC KPVVIYCRSGARSAQACAFMASKGYGNMHNLAGGIIAWARAGQAIRPAG CCEEEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]