| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is ctaE [H]
Identifier: 74316578
GI number: 74316578
Start: 588788
End: 589381
Strand: Reverse
Name: ctaE [H]
Synonym: Tbd_0560
Alternate gene names: 74316578
Gene position: 589381-588788 (Counterclockwise)
Preceding gene: 74316579
Following gene: 74316577
Centisome position: 20.25
GC content: 63.97
Gene sequence:
>594_bases TTGAACGTCTCCCTAACAATTCCAACACCCCATCGCGAGCCCCGGGCACTGCCGGGCGATCTCGCGATGTGGTTTTTCAT CCTCGCCGAACTGCTGGTGTTCGGCGTCTTCTTTCTCGCGTACGCGTTCGCGCGGGCGCGCAATGTCGAATTGTTCAACG CGTCGCAACTCGCACTCAGCCAGCTGAGCGGCGCGATCAATACCGTGCTGCTGATCACCAGCAGCTATTTCGTCGTCCGC GCCGTCGACCGGGTCCGGCGCGGACACTCCCGCCCTGCGGCCGTCTGGCTCGGCGCCGCGATGGCCTGCGGCGGCACCTT CCTCGTGCTCAAGCTGGCCGAACTCGGCGGAAAAATGAGTGCCGGGATCACGATGTCGACGAACGTCTTCTACATGTTCT ACCTCGGCCTCGGCGCCTTCCACTTCATGCACGTCGTGCTCGGCATGGTCATCCTCGGCGCGATCACGCTCAAGGCCTGG CAGGGCGGCTACAGCGCCGCGAATCACGGCGGCGTCGAAACCGGCGCGGCCTACTGGCACATGGTGGACCTCGTGTGGAT CGTGCTCTTCCCGCTGATTTACGTGCTGCGCTGA
Upstream 100 bases:
>100_bases CGTCAAGGGCAAGGAAGTCACCGTCAGCACCACGGCGACGGCGGCTGCCGCAGCCTAAACCCTGATCCGCCCGGTTCGCC GGGCGGAAACGGAAACGATC
Downstream 100 bases:
>100_bases CCATGCTCAAGACACCGACCGCCCACTGGCTGATCCTGCTCACGCTGACCGCGCTCGCCGTCGTCCTGACGCGCGACGGG CTGACCGGCAACGCGCTCCT
Product: putative nitric oxide reductase (Nor) complex membrane protein
Products: NA
Alternate protein names: Cytochrome aa3 subunit 3; Cytochrome c oxidase polypeptide III; Oxidase aa(3) subunit 3 [H]
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MNVSLTIPTPHREPRALPGDLAMWFFILAELLVFGVFFLAYAFARARNVELFNASQLALSQLSGAINTVLLITSSYFVVR AVDRVRRGHSRPAAVWLGAAMACGGTFLVLKLAELGGKMSAGITMSTNVFYMFYLGLGAFHFMHVVLGMVILGAITLKAW QGGYSAANHGGVETGAAYWHMVDLVWIVLFPLIYVLR
Sequences:
>Translated_197_residues MNVSLTIPTPHREPRALPGDLAMWFFILAELLVFGVFFLAYAFARARNVELFNASQLALSQLSGAINTVLLITSSYFVVR AVDRVRRGHSRPAAVWLGAAMACGGTFLVLKLAELGGKMSAGITMSTNVFYMFYLGLGAFHFMHVVLGMVILGAITLKAW QGGYSAANHGGVETGAAYWHMVDLVWIVLFPLIYVLR >Mature_197_residues MNVSLTIPTPHREPRALPGDLAMWFFILAELLVFGVFFLAYAFARARNVELFNASQLALSQLSGAINTVLLITSSYFVVR AVDRVRRGHSRPAAVWLGAAMACGGTFLVLKLAELGGKMSAGITMSTNVFYMFYLGLGAFHFMHVVLGMVILGAITLKAW QGGYSAANHGGVETGAAYWHMVDLVWIVLFPLIYVLR
Specific function: Cytochrome O Terminal Oxidase Complex Is The Component Of The Aerobic Respiratory Chain Of E.Coli That Predominates When Cells Are Grown At High Aeration. [C]
COG id: COG1845
COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome c oxidase subunit 3 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000298 - InterPro: IPR013833 [H]
Pfam domain/function: PF00510 COX3 [H]
EC number: =1.9.3.1 [H]
Molecular weight: Translated: 21546; Mature: 21546
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: PS50253 COX3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVSLTIPTPHREPRALPGDLAMWFFILAELLVFGVFFLAYAFARARNVELFNASQLALS CCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHH QLSGAINTVLLITSSYFVVRAVDRVRRGHSRPAAVWLGAAMACGGTFLVLKLAELGGKMS HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCC AGITMSTNVFYMFYLGLGAFHFMHVVLGMVILGAITLKAWQGGYSAANHGGVETGAAYWH CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH MVDLVWIVLFPLIYVLR HHHHHHHHHHHHHHHHC >Mature Secondary Structure MNVSLTIPTPHREPRALPGDLAMWFFILAELLVFGVFFLAYAFARARNVELFNASQLALS CCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHH QLSGAINTVLLITSSYFVVRAVDRVRRGHSRPAAVWLGAAMACGGTFLVLKLAELGGKMS HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCC AGITMSTNVFYMFYLGLGAFHFMHVVLGMVILGAITLKAWQGGYSAANHGGVETGAAYWH CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH MVDLVWIVLFPLIYVLR HHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8399373 [H]