| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is nirQ [H]
Identifier: 74316576
GI number: 74316576
Start: 587700
End: 588515
Strand: Reverse
Name: nirQ [H]
Synonym: Tbd_0558
Alternate gene names: 74316576
Gene position: 588515-587700 (Counterclockwise)
Preceding gene: 74316577
Following gene: 74316575
Centisome position: 20.23
GC content: 67.4
Gene sequence:
>816_bases ATGAACGACATGTCCACGCCCGGCCTCGATACCCTCTCCGCGGTCCCGTTCTACCAGCCGGTCGGCAACGAGTGCGAACT GTTCGAGTACGCGTTCCGCAAGCGCCTGCCGCTGCTGATCAAGGGGCCGACCGGCTGCGGCAAGACGCGCTTCGTCGCGC ACATGGCCGCGCGCCTCGCGCGACCGCTGATCACGGTCGCCTGCCACGACGACCTCACCGCGGCGGATCTCGTCGGCCGC CATCTGATCGGCGACGGCCAGACCGTGTGGTCGGACGGCCCCCTGACGCGCGCGGTGCGCGAAGGCGGCATCTGCTATCT CGACGAGATCGTCGAAGCGCGCAAGGACACGACGGTCGTGCTGCATCCGCTGACCGATGACCGGCGCATCCTGCCGATCG AGCGCACGGGCGAGGAACTGCAGGCGCCCGACGACTTCATGCTCGTCGTCTCCTACAACCCGGGCTACCAGAACCTCCTG AAAAGCCTCAAACCGTCGACGCGCCAGCGCTTCGTCGCGATCAGCTTCGATTTCCCACCGGCAGCGCTCGAGGAAAAGAT CGTCATCGCGGAGACCGGTGTCTCGCCGCTCGTCGCGAGACAGCTCGTCAACCTCGCCGGCCACCTGCGCCAGCTGAAGG ACCACGACCTCGAGGAGGCGGCGTCGACGCGCCTGCTCGTGTATGCCGCAAGCCTCGTCCAGGCCGGCTGCGACCCGGTC GCCGCCTGCGAAGCGGCGCTCGTCGAATCGCTGACCGACGACAAGGACACGGCCGAAGCACTGCTCGAAGTCATCAAGGC GACCTTCGGCAACTAG
Upstream 100 bases:
>100_bases CGGCGCGCCCTGGCGCTGGATCGTGCTGGGTTGGCTATTCTTGGTGCTGGGCCTCATCGCCTATGCCTTCCAAACGACGT AGAAGCAACCGGAGAATTCC
Downstream 100 bases:
>100_bases GCCATGGACGCGCCGCCCGACCCGCGCGTGGTCGCCGTTCAGGCCGAAGCGCTCTACCTCCTGAACCTGCTTCTGATGCC CGGGCTCGCCTTCCTGCTCC
Product: putative nitric oxide reductase activation protein NorQ
Products: nitric oxide; reduced acceptor
Alternate protein names: NA
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MNDMSTPGLDTLSAVPFYQPVGNECELFEYAFRKRLPLLIKGPTGCGKTRFVAHMAARLARPLITVACHDDLTAADLVGR HLIGDGQTVWSDGPLTRAVREGGICYLDEIVEARKDTTVVLHPLTDDRRILPIERTGEELQAPDDFMLVVSYNPGYQNLL KSLKPSTRQRFVAISFDFPPAALEEKIVIAETGVSPLVARQLVNLAGHLRQLKDHDLEEAASTRLLVYAASLVQAGCDPV AACEAALVESLTDDKDTAEALLEVIKATFGN
Sequences:
>Translated_271_residues MNDMSTPGLDTLSAVPFYQPVGNECELFEYAFRKRLPLLIKGPTGCGKTRFVAHMAARLARPLITVACHDDLTAADLVGR HLIGDGQTVWSDGPLTRAVREGGICYLDEIVEARKDTTVVLHPLTDDRRILPIERTGEELQAPDDFMLVVSYNPGYQNLL KSLKPSTRQRFVAISFDFPPAALEEKIVIAETGVSPLVARQLVNLAGHLRQLKDHDLEEAASTRLLVYAASLVQAGCDPV AACEAALVESLTDDKDTAEALLEVIKATFGN >Mature_271_residues MNDMSTPGLDTLSAVPFYQPVGNECELFEYAFRKRLPLLIKGPTGCGKTRFVAHMAARLARPLITVACHDDLTAADLVGR HLIGDGQTVWSDGPLTRAVREGGICYLDEIVEARKDTTVVLHPLTDDRRILPIERTGEELQAPDDFMLVVSYNPGYQNLL KSLKPSTRQRFVAISFDFPPAALEEKIVIAETGVSPLVARQLVNLAGHLRQLKDHDLEEAASTRLLVYAASLVQAGCDPV AACEAALVESLTDDKDTAEALLEVIKATFGN
Specific function: Activator of nitrite and nitric oxide reductases [H]
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CbbQ/NirQ/NorQ/GpvN family [H]
Homologues:
Organism=Homo sapiens, GI24415404, Length=171, Percent_Identity=30.9941520467836, Blast_Score=75, Evalue=9e-14, Organism=Saccharomyces cerevisiae, GI6323135, Length=191, Percent_Identity=31.413612565445, Blast_Score=82, Evalue=7e-17, Organism=Drosophila melanogaster, GI161076562, Length=193, Percent_Identity=29.0155440414508, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI161076560, Length=193, Percent_Identity=29.0155440414508, Blast_Score=82, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011704 - InterPro: IPR013615 [H]
Pfam domain/function: PF07728 AAA_5; PF08406 CbbQ_C [H]
EC number: 1.7.99.7
Molecular weight: Translated: 29567; Mature: 29567
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDMSTPGLDTLSAVPFYQPVGNECELFEYAFRKRLPLLIKGPTGCGKTRFVAHMAARLA CCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHH RPLITVACHDDLTAADLVGRHLIGDGQTVWSDGPLTRAVREGGICYLDEIVEARKDTTVV HHHEEEEECCCCHHHHHHHHHHCCCCCEEECCCCHHHHHHHCCCEEHHHHHHHCCCCEEE LHPLTDDRRILPIERTGEELQAPDDFMLVVSYNPGYQNLLKSLKPSTRQRFVAISFDFPP EEECCCCCEEEEHHCCCHHHCCCCCEEEEEEECCCHHHHHHHCCCCCCCEEEEEEECCCC AALEEKIVIAETGVSPLVARQLVNLAGHLRQLKDHDLEEAASTRLLVYAASLVQAGCDPV HHHHCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHH AACEAALVESLTDDKDTAEALLEVIKATFGN HHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNDMSTPGLDTLSAVPFYQPVGNECELFEYAFRKRLPLLIKGPTGCGKTRFVAHMAARLA CCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHH RPLITVACHDDLTAADLVGRHLIGDGQTVWSDGPLTRAVREGGICYLDEIVEARKDTTVV HHHEEEEECCCCHHHHHHHHHHCCCCCEEECCCCHHHHHHHCCCEEHHHHHHHCCCCEEE LHPLTDDRRILPIERTGEELQAPDDFMLVVSYNPGYQNLLKSLKPSTRQRFVAISFDFPP EEECCCCCEEEEHHCCCHHHCCCCCEEEEEEECCCHHHHHHHCCCCCCCEEEEEEECCCC AALEEKIVIAETGVSPLVARQLVNLAGHLRQLKDHDLEEAASTRLLVYAASLVQAGCDPV HHHHCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHH AACEAALVESLTDDKDTAEALLEVIKATFGN HHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: nitrous oxide; acceptor; H2O
Specific reaction: nitrous oxide + acceptor + H2O = 2 nitric oxide + reduced acceptor
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1468562 [H]