| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
Click here to switch to the map view.
The map label for this gene is 74316502
Identifier: 74316502
GI number: 74316502
Start: 504922
End: 505407
Strand: Direct
Name: 74316502
Synonym: Tbd_0484
Alternate gene names: NA
Gene position: 504922-505407 (Clockwise)
Preceding gene: 74316501
Following gene: 74316503
Centisome position: 17.35
GC content: 67.49
Gene sequence:
>486_bases ATGGAGGACGAAACGGTGAAGGATGAGGCGCGTCGACCGCGCACCTGGATCTTGCCGCCGGCGCCGTATGCGTTGGCGCT GCTGGCCGGTTGGTGGATCGATCGACATCTCTTTGCATGGCCGCTCGACCTCGGTGCCGCGACGCGCGCGAGCGGCTGGT CGCTGGTCGGCGTCGGCCTGGCCCTGTTCGCCTGGACGCTGTGGACCTTCGCGCGCCGCCATACGACGGTCAATCCCTAT GCCGCGGCGTCGGCGCTTTGCACGAGCGGGCCCTTCCGCTTCAGCCGCAACCCGATTTATCTCGGCGACTGGTTCCTGCT CGGCGGCATCTCCACCCTGATCGGAACGTGGTGGCCGCTGGCCTTCGCGCCGCTGATCTGGGCCACGCTGCGTTTCGGCG TGATCCGGCACGAAGAGGCGCATCTCGAAGCCCGGTTCGGCGACGCGTACCGCGTTTACAAGACGCGTGTGCGGCGCTGG ATATGA
Upstream 100 bases:
>100_bases GGCTGGAAACAGGTGCATCATCACGGCTCGATCGAGGCTCCCGTGCTGCCCCGCTATCGGGCGGCGGTGCTGGGCGCGCA GTCCGGCCCCGGTGCGGTGA
Downstream 100 bases:
>100_bases CGGGCGAGCACCACTTAACCCAAGGAGGCGACATGAGTATTCTCGACACCGTCACACCCGACAACGCGACCGGCGAAGTC GCCGAGATCTACGGCCAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Isoprenylcysteine Carboxyl Methyltransferase Family Protein; Protein-S-Isoprenylcysteine Methyltransferase
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MEDETVKDEARRPRTWILPPAPYALALLAGWWIDRHLFAWPLDLGAATRASGWSLVGVGLALFAWTLWTFARRHTTVNPY AAASALCTSGPFRFSRNPIYLGDWFLLGGISTLIGTWWPLAFAPLIWATLRFGVIRHEEAHLEARFGDAYRVYKTRVRRW I
Sequences:
>Translated_161_residues MEDETVKDEARRPRTWILPPAPYALALLAGWWIDRHLFAWPLDLGAATRASGWSLVGVGLALFAWTLWTFARRHTTVNPY AAASALCTSGPFRFSRNPIYLGDWFLLGGISTLIGTWWPLAFAPLIWATLRFGVIRHEEAHLEARFGDAYRVYKTRVRRW I >Mature_161_residues MEDETVKDEARRPRTWILPPAPYALALLAGWWIDRHLFAWPLDLGAATRASGWSLVGVGLALFAWTLWTFARRHTTVNPY AAASALCTSGPFRFSRNPIYLGDWFLLGGISTLIGTWWPLAFAPLIWATLRFGVIRHEEAHLEARFGDAYRVYKTRVRRW I
Specific function: Unknown
COG id: COG2020
COG function: function code O; Putative protein-S-isoprenylcysteine methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18442; Mature: 18442
Theoretical pI: Translated: 10.40; Mature: 10.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDETVKDEARRPRTWILPPAPYALALLAGWWIDRHLFAWPLDLGAATRASGWSLVGVGL CCCCCCHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH ALFAWTLWTFARRHTTVNPYAAASALCTSGPFRFSRNPIYLGDWFLLGGISTLIGTWWPL HHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHH AFAPLIWATLRFGVIRHEEAHLEARFGDAYRVYKTRVRRWI HHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHCC >Mature Secondary Structure MEDETVKDEARRPRTWILPPAPYALALLAGWWIDRHLFAWPLDLGAATRASGWSLVGVGL CCCCCCHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH ALFAWTLWTFARRHTTVNPYAAASALCTSGPFRFSRNPIYLGDWFLLGGISTLIGTWWPL HHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHH AFAPLIWATLRFGVIRHEEAHLEARFGDAYRVYKTRVRRWI HHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA