| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
Click here to switch to the map view.
The map label for this gene is 74316452
Identifier: 74316452
GI number: 74316452
Start: 453463
End: 453762
Strand: Reverse
Name: 74316452
Synonym: Tbd_0434
Alternate gene names: NA
Gene position: 453762-453463 (Counterclockwise)
Preceding gene: 74316453
Following gene: 74316451
Centisome position: 15.59
GC content: 72.0
Gene sequence:
>300_bases ATGCGGTCAACACTTCCCGTCGCACTATTCGCTGCCCTCGCGCTCGGCGCGTGTGAAAAAACCGAAGACGCCACGGCGCC GGCCCTGGAGCAGGCCCGAGAGGCCGCGCGCGCGGCAGCCGATTCGGCGGCCGTAGCAGCACGTTCGGCCGCCGCTGCGG CAGAAGCCGCAGCCGATGTCGCGGTCGACGCGGGCTCAGCCGCGGGACGCGCTTCCCGTGACACCGCCGGCGAAGCCGCC GACGTCACGGTCGAGGCGGCAAGAGAGGCCGTCAACAAGGCGCGGGAAGCGGCGAACTGA
Upstream 100 bases:
>100_bases CTCGCGAGCGCTTGTTTTAGGCGGCCGTACCCGCTATGAATAAAAGCTCCGTGCGTCGCGGCCCCGCATCATTTTCCATC CGACTGAAGGGAGCTCTACC
Downstream 100 bases:
>100_bases ACCGCTGCAACCGCCGGGCGCGAACGCGCCGAGGCCGCCCTCCCGCCGCCGGTGCAGGCGACTTCGCGCTCGCCCGTTGC GCGGTCCGGTGAATCCACGC
Product: lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 99; Mature: 99
Protein sequence:
>99_residues MRSTLPVALFAALALGACEKTEDATAPALEQAREAARAAADSAAVAARSAAAAAEAAADVAVDAGSAAGRASRDTAGEAA DVTVEAAREAVNKAREAAN
Sequences:
>Translated_99_residues MRSTLPVALFAALALGACEKTEDATAPALEQAREAARAAADSAAVAARSAAAAAEAAADVAVDAGSAAGRASRDTAGEAA DVTVEAAREAVNKAREAAN >Mature_99_residues MRSTLPVALFAALALGACEKTEDATAPALEQAREAARAAADSAAVAARSAAAAAEAAADVAVDAGSAAGRASRDTAGEAA DVTVEAAREAVNKAREAAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9580; Mature: 9580
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSTLPVALFAALALGACEKTEDATAPALEQAREAARAAADSAAVAARSAAAAAEAAADV CCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVDAGSAAGRASRDTAGEAADVTVEAAREAVNKAREAAN HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRSTLPVALFAALALGACEKTEDATAPALEQAREAARAAADSAAVAARSAAAAAEAAADV CCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVDAGSAAGRASRDTAGEAADVTVEAAREAVNKAREAAN HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA