| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is prs [H]
Identifier: 74316405
GI number: 74316405
Start: 415528
End: 416478
Strand: Direct
Name: prs [H]
Synonym: Tbd_0387
Alternate gene names: 74316405
Gene position: 415528-416478 (Clockwise)
Preceding gene: 74316404
Following gene: 74316406
Centisome position: 14.28
GC content: 63.93
Gene sequence:
>951_bases GTGTCCATAGACAATCTGATGGTGTTCAGTGGGAACGCGAACCCGCGTTTGGCCAGCGACGTGGTGCGCCATCTCAATAT CCATCTCGGGCGCGCGACCGTTTCGCGCTTCTCGGACGGCGAGGTCATGGTCGAAATCCTCGAGAACGTGCGCGGCAAGG ACGTCTTCGTCCTGCAGTCGACCTGCCAGCCGACCAACGACACCCTGATGGAGGTGATGGTCATGGTCGACGCGCTCAAG CGCGCCTCGGCTGCACGCATCACCGCGGCCATCCCGTATTACGGCTACGCGCGCCAGGACCGGCGCACGCGGTCGGCGCG TGTCGCGATCACGGCCAAGGTCGTCGCCAACATGCTGCAGGGCGCCGGGGTCGATCGCCTGCTGACGATGGACCTGCACT CGGACCAGATTCAGGGCTTTTTCGACATTCCGGTCGACAACATCTACTCGAGCCCGATCCTGCTGGGCGACATCTGGAAG CGCAACCACCCGAACCTCATGGTGGTCTCGCCCGACGTCGGTGGCGTGGTACGGGCCCGCGCGATCGCGAAGCGCCTCGA ATGCGATCTGGCGATCATCGACAAGCGCCGCCCCAAGCCCAACGTCGCGAAGGTCATGCACATCATCGGCGACGTCAAGG ACCGCACCTGCATCATCATGGATGACATGGTCGACACGGCGAACACGCTGTGCGAGGCGGCCAGTGCGCTCAAGGAACAT GGTGCGCAGAAGGTCATGGCCTATTGCACCCACGCCGTGCTGTCGGGCAGCGCGGCCGAGCGCGTCACCAACTCGGCGCT CGATGAGCTCGTCGTGACCGACACGATCCCGCTGCGCGACGACGCGCGGGCGTGCAAGAAGATCCGGCAATTGTCGGTGG CTGAGCTGCTCGCGGAAACGATCCGCCGCATCAGCAACGAGGATTCCGTCAGTTCGCTCTTCATCGAATAG
Upstream 100 bases:
>100_bases TCGTAGGTTCGATCCCTACCTCCCCAGCCAGATAGAGCGAACAGCCGCCCGGTGGCGGCTGTTTTTGTTGTGTCGGACCA GCCGAAAGCCGGAGACTCGC
Downstream 100 bases:
>100_bases CGAAGTGGAATGCCCCTGGTCGCGGGGGCTCAACCATGCGTCGGCGCGCATCGCCGATGCATCATCAGGCAGTCATTGAG GAGAAGTTTCATGGAAATCG
Product: ribose-phosphate pyrophosphokinase
Products: NA
Alternate protein names: RPPK; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase [H]
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MSIDNLMVFSGNANPRLASDVVRHLNIHLGRATVSRFSDGEVMVEILENVRGKDVFVLQSTCQPTNDTLMEVMVMVDALK RASAARITAAIPYYGYARQDRRTRSARVAITAKVVANMLQGAGVDRLLTMDLHSDQIQGFFDIPVDNIYSSPILLGDIWK RNHPNLMVVSPDVGGVVRARAIAKRLECDLAIIDKRRPKPNVAKVMHIIGDVKDRTCIIMDDMVDTANTLCEAASALKEH GAQKVMAYCTHAVLSGSAAERVTNSALDELVVTDTIPLRDDARACKKIRQLSVAELLAETIRRISNEDSVSSLFIE
Sequences:
>Translated_316_residues MSIDNLMVFSGNANPRLASDVVRHLNIHLGRATVSRFSDGEVMVEILENVRGKDVFVLQSTCQPTNDTLMEVMVMVDALK RASAARITAAIPYYGYARQDRRTRSARVAITAKVVANMLQGAGVDRLLTMDLHSDQIQGFFDIPVDNIYSSPILLGDIWK RNHPNLMVVSPDVGGVVRARAIAKRLECDLAIIDKRRPKPNVAKVMHIIGDVKDRTCIIMDDMVDTANTLCEAASALKEH GAQKVMAYCTHAVLSGSAAERVTNSALDELVVTDTIPLRDDARACKKIRQLSVAELLAETIRRISNEDSVSSLFIE >Mature_315_residues SIDNLMVFSGNANPRLASDVVRHLNIHLGRATVSRFSDGEVMVEILENVRGKDVFVLQSTCQPTNDTLMEVMVMVDALKR ASAARITAAIPYYGYARQDRRTRSARVAITAKVVANMLQGAGVDRLLTMDLHSDQIQGFFDIPVDNIYSSPILLGDIWKR NHPNLMVVSPDVGGVVRARAIAKRLECDLAIIDKRRPKPNVAKVMHIIGDVKDRTCIIMDDMVDTANTLCEAASALKEHG AQKVMAYCTHAVLSGSAAERVTNSALDELVVTDTIPLRDDARACKKIRQLSVAELLAETIRRISNEDSVSSLFIE
Specific function: Utilized by both the de novo and the salvage pathways by which endogenously formed or exogenously added pyrimidine, purine, or pyridine bases are converted to the corresponding ribonucleoside monophosphates. [C]
COG id: COG0462
COG function: function code FE; Phosphoribosylpyrophosphate synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribose-phosphate pyrophosphokinase family [H]
Homologues:
Organism=Homo sapiens, GI4506129, Length=314, Percent_Identity=47.7707006369427, Blast_Score=299, Evalue=2e-81, Organism=Homo sapiens, GI84875539, Length=316, Percent_Identity=47.1518987341772, Blast_Score=298, Evalue=5e-81, Organism=Homo sapiens, GI4506127, Length=314, Percent_Identity=47.4522292993631, Blast_Score=297, Evalue=7e-81, Organism=Homo sapiens, GI28557709, Length=314, Percent_Identity=46.8152866242038, Blast_Score=289, Evalue=2e-78, Organism=Homo sapiens, GI4506133, Length=346, Percent_Identity=36.1271676300578, Blast_Score=204, Evalue=1e-52, Organism=Homo sapiens, GI194018537, Length=342, Percent_Identity=35.9649122807018, Blast_Score=198, Evalue=6e-51, Organism=Homo sapiens, GI310128524, Length=149, Percent_Identity=33.5570469798658, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI310115209, Length=149, Percent_Identity=33.5570469798658, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI310118259, Length=149, Percent_Identity=33.5570469798658, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI310119946, Length=149, Percent_Identity=33.5570469798658, Blast_Score=87, Evalue=3e-17, Organism=Escherichia coli, GI1787458, Length=311, Percent_Identity=62.7009646302251, Blast_Score=410, Evalue=1e-116, Organism=Caenorhabditis elegans, GI25149168, Length=313, Percent_Identity=45.6869009584665, Blast_Score=289, Evalue=1e-78, Organism=Caenorhabditis elegans, GI17554702, Length=313, Percent_Identity=45.6869009584665, Blast_Score=288, Evalue=2e-78, Organism=Caenorhabditis elegans, GI71989924, Length=317, Percent_Identity=45.1104100946372, Blast_Score=287, Evalue=4e-78, Organism=Caenorhabditis elegans, GI17554704, Length=310, Percent_Identity=45.8064516129032, Blast_Score=286, Evalue=8e-78, Organism=Caenorhabditis elegans, GI17570245, Length=340, Percent_Identity=35.2941176470588, Blast_Score=199, Evalue=2e-51, Organism=Saccharomyces cerevisiae, GI6319403, Length=318, Percent_Identity=43.3962264150943, Blast_Score=267, Evalue=2e-72, Organism=Saccharomyces cerevisiae, GI6321776, Length=316, Percent_Identity=43.0379746835443, Blast_Score=260, Evalue=2e-70, Organism=Saccharomyces cerevisiae, GI6320946, Length=317, Percent_Identity=42.2712933753943, Blast_Score=260, Evalue=2e-70, Organism=Saccharomyces cerevisiae, GI6322667, Length=198, Percent_Identity=40.9090909090909, Blast_Score=147, Evalue=2e-36, Organism=Saccharomyces cerevisiae, GI6324511, Length=109, Percent_Identity=39.4495412844037, Blast_Score=102, Evalue=8e-23, Organism=Drosophila melanogaster, GI21355239, Length=313, Percent_Identity=48.8817891373802, Blast_Score=293, Evalue=1e-79, Organism=Drosophila melanogaster, GI45551540, Length=335, Percent_Identity=45.6716417910448, Blast_Score=283, Evalue=9e-77, Organism=Drosophila melanogaster, GI24651458, Length=358, Percent_Identity=34.3575418994413, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI24651456, Length=358, Percent_Identity=34.3575418994413, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI281362873, Length=358, Percent_Identity=34.3575418994413, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI24651454, Length=358, Percent_Identity=34.3575418994413, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI24651462, Length=377, Percent_Identity=31.8302387267904, Blast_Score=195, Evalue=3e-50, Organism=Drosophila melanogaster, GI24651464, Length=377, Percent_Identity=31.8302387267904, Blast_Score=195, Evalue=3e-50, Organism=Drosophila melanogaster, GI45552010, Length=377, Percent_Identity=31.8302387267904, Blast_Score=195, Evalue=3e-50,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000842 - InterPro: IPR005946 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.7.6.1 [H]
Molecular weight: Translated: 34771; Mature: 34639
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER ; PS00114 PRPP_SYNTHETASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIDNLMVFSGNANPRLASDVVRHLNIHLGRATVSRFSDGEVMVEILENVRGKDVFVLQS CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEC TCQPTNDTLMEVMVMVDALKRASAARITAAIPYYGYARQDRRTRSARVAITAKVVANMLQ CCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH GAGVDRLLTMDLHSDQIQGFFDIPVDNIYSSPILLGDIWKRNHPNLMVVSPDVGGVVRAR CCCCCCEEEECCCHHHCCEEEECCHHHHCCCCEEEHHHHCCCCCCEEEECCCCCHHHHHH AIAKRLECDLAIIDKRRPKPNVAKVMHIIGDVKDRTCIIMDDMVDTANTLCEAASALKEH HHHHHHHCCEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHH GAQKVMAYCTHAVLSGSAAERVTNSALDELVVTDTIPLRDDARACKKIRQLSVAELLAET HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH IRRISNEDSVSSLFIE HHHHCCCCCHHHHCCC >Mature Secondary Structure SIDNLMVFSGNANPRLASDVVRHLNIHLGRATVSRFSDGEVMVEILENVRGKDVFVLQS CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEC TCQPTNDTLMEVMVMVDALKRASAARITAAIPYYGYARQDRRTRSARVAITAKVVANMLQ CCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH GAGVDRLLTMDLHSDQIQGFFDIPVDNIYSSPILLGDIWKRNHPNLMVVSPDVGGVVRAR CCCCCCEEEECCCHHHCCEEEECCHHHHCCCCEEEHHHHCCCCCCEEEECCCCCHHHHHH AIAKRLECDLAIIDKRRPKPNVAKVMHIIGDVKDRTCIIMDDMVDTANTLCEAASALKEH HHHHHHHCCEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHH GAQKVMAYCTHAVLSGSAAERVTNSALDELVVTDTIPLRDDARACKKIRQLSVAELLAET HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH IRRISNEDSVSSLFIE HHHHCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12700255 [H]