| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316400
Identifier: 74316400
GI number: 74316400
Start: 409168
End: 411126
Strand: Reverse
Name: 74316400
Synonym: Tbd_0382
Alternate gene names: NA
Gene position: 411126-409168 (Counterclockwise)
Preceding gene: 74316401
Following gene: 74316394
Centisome position: 14.13
GC content: 66.21
Gene sequence:
>1959_bases ATGAAATCCACGACCCTCGTTGACGAGTTCGAGCATTACAGCAGCTGGCGCGACGCCGTCCGCCTGCGTGTCGTGGCTTT GCGCGACTGGCTGCACGCCCATGAGCTCGGCGACGCCGAGTCGGCGCTGCGGCTCGATCAACTGCTGGGCCGCCTGCAGG CGGACACGCTCAACGTCGCGTTCGTCGCCGAGTTCTCGCGCGGCAAATCGGAGCTGATCAACGCGATCTTCTTTTCCGAC TACAGCCGGCGCGTGCTGCCGTCCGCGGCCGGACGCACGACCATGTGCCCGACCGAGCTCGCGTACACGCCCGCACGCCG GCCTTCGCTGCGCCTGTTGCCGATCGAGACGAAAGCACAGGCCGGCAGCATCGCCGACTTCAAGCGCGACGACGACGCTT GGACCGAACTCCCGCTCGATCTCGACTCCGCGGCGAACATGAGCGAAACGCTGCGACATCTGGCCGACACGATTCCGGCG GACCGGGCGACGGCGACGGCGTACGGCCTGATCGACCCCGACGATCAGGAGACGCTGCGCAGCCTCGAGCGTGACGGCAG CATCGCCATCCCGCGCTGGCGCCACGCCTTGATCAACTTCCCGCATCCGCTCCTCAAACAGGGGCTCGTGATCCTCGACA CGCCCGGGCTCAACGCGATCGGCACCGAGCCGGAACTGACGCTCAACATGCTGCCCGCCGCGCACGCGGTGCTGTTTCTG CTCGCCGCCGACACCGGCGTCACCAAGTCCGACATCGCGATCTGGCGCGAGCACATCGCAGCCGCGCACGGTACGAGCCG CGCACGCCTCGTGGTCCTGAACAAGATCGACGGCCTGTGGGACGATCTCAAGACCGCGGCCGAGATCGACGCCGAAGTCG CCCGACAGGCCGCGACCACCGCGGCCCTGCTCGACGTGGCGCCAGGCCAGGTCTATCCCGTATCGGCGCAAAAGGCTTTG GTCGCGAAAGTACGCAGCGACGACGCTCTGCTCGCCAAAAGCCGCCTGCCCGAGCTCGAGGCGGCGCTGACCCAGGAACT GATTCCCTGTAAGCAGGCGCTCGTCGCAGAATCGGCGAGTGCGGCCGTCGAAGACGTGGTGATCAAGACGACCGAACTGC TGGAAACCCGGCTCGCCATCCTTCAGGATCAGATCGACGAACTTCAGGGGCTGCGCGGCAAGAACCGGGACGCGATCCAG CACATGATGGCCAAGGCCAACGAGGACAAGCGGCAGTTCGAGCGGGGACTGCAGCAATTCAACGCGCTGCGCAACGTGTT CGCGTCGCAGGTCGAGACGCTGCGGCGGCAGCTCGGCATGTCGGCCTTGCGTCGCGCGGTGCGCGACACCCGCCACGCCA TGGAAAAAAGCCGCTTCAGCGGCGGCCTGCGCGACGCAATGGGCCGGTTCTTCCGCCAGGTCGACGACAACCTCGAGGCA TCCGCCGCAAGCATCAGCGAAATCCGCATGATGACCGCGATGTACCGGAAATTCAGCGACGAGCACGGACTCGCAGCGGT CAATCCGCCGGACTACGGCCTCGGCAAGTACCGCAAGGAAATGGTCCGTCTCGAACGCATCTTCGACGAGCGCTTCAATA CCGTGTTCAAGATGCTGACGGTGGGCCAGAGCCAGTTGACGGCGCGGTTTTTCGAGACCCTAGCGAGCAAGGTCGTGCAG GTCTTCGAACTCGCGAACAACGAGACCGAAGCCTGGCTCAAGGCGCTCATCGCGCCCATGGAGACGCAGGTCCGCGAACA CGAGATCCAGCTCAGGCGGCGGCTCGAAAACGTCAGCCGCATCCACGCCGCGACCGAGACGCTCGACGAGCGCATCGTCG AACTCGAAACCTCGATGGCGGGGGTCGGCGACCAGCTCGAAAATCTGGCGCGCATCAACGCGGGGATCGGTGCGGCGCTC GCCGTGCACGACGAGGCGCCGCGGGCGCGGACGGCCTGA
Upstream 100 bases:
>100_bases GAGCTTCTACTGCCCGACGTGCCAGCGCTGATGGCCGGCAAATCAAGTTTGATCCCGGCGTGTCGTTAACCTCCTGTCCT GAGCGCGGCCGATCCGCCTG
Downstream 100 bases:
>100_bases ACCGCCCGCAAGGGCCTACTTTTCCACCGTCAGGCGCAGGAATTTTTCCTGCAGTTGTTCGGGCGTTTCGGGATAGCTCG GGTTCTTCGGAATGCAGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 652; Mature: 652
Protein sequence:
>652_residues MKSTTLVDEFEHYSSWRDAVRLRVVALRDWLHAHELGDAESALRLDQLLGRLQADTLNVAFVAEFSRGKSELINAIFFSD YSRRVLPSAAGRTTMCPTELAYTPARRPSLRLLPIETKAQAGSIADFKRDDDAWTELPLDLDSAANMSETLRHLADTIPA DRATATAYGLIDPDDQETLRSLERDGSIAIPRWRHALINFPHPLLKQGLVILDTPGLNAIGTEPELTLNMLPAAHAVLFL LAADTGVTKSDIAIWREHIAAAHGTSRARLVVLNKIDGLWDDLKTAAEIDAEVARQAATTAALLDVAPGQVYPVSAQKAL VAKVRSDDALLAKSRLPELEAALTQELIPCKQALVAESASAAVEDVVIKTTELLETRLAILQDQIDELQGLRGKNRDAIQ HMMAKANEDKRQFERGLQQFNALRNVFASQVETLRRQLGMSALRRAVRDTRHAMEKSRFSGGLRDAMGRFFRQVDDNLEA SAASISEIRMMTAMYRKFSDEHGLAAVNPPDYGLGKYRKEMVRLERIFDERFNTVFKMLTVGQSQLTARFFETLASKVVQ VFELANNETEAWLKALIAPMETQVREHEIQLRRRLENVSRIHAATETLDERIVELETSMAGVGDQLENLARINAGIGAAL AVHDEAPRARTA
Sequences:
>Translated_652_residues MKSTTLVDEFEHYSSWRDAVRLRVVALRDWLHAHELGDAESALRLDQLLGRLQADTLNVAFVAEFSRGKSELINAIFFSD YSRRVLPSAAGRTTMCPTELAYTPARRPSLRLLPIETKAQAGSIADFKRDDDAWTELPLDLDSAANMSETLRHLADTIPA DRATATAYGLIDPDDQETLRSLERDGSIAIPRWRHALINFPHPLLKQGLVILDTPGLNAIGTEPELTLNMLPAAHAVLFL LAADTGVTKSDIAIWREHIAAAHGTSRARLVVLNKIDGLWDDLKTAAEIDAEVARQAATTAALLDVAPGQVYPVSAQKAL VAKVRSDDALLAKSRLPELEAALTQELIPCKQALVAESASAAVEDVVIKTTELLETRLAILQDQIDELQGLRGKNRDAIQ HMMAKANEDKRQFERGLQQFNALRNVFASQVETLRRQLGMSALRRAVRDTRHAMEKSRFSGGLRDAMGRFFRQVDDNLEA SAASISEIRMMTAMYRKFSDEHGLAAVNPPDYGLGKYRKEMVRLERIFDERFNTVFKMLTVGQSQLTARFFETLASKVVQ VFELANNETEAWLKALIAPMETQVREHEIQLRRRLENVSRIHAATETLDERIVELETSMAGVGDQLENLARINAGIGAAL AVHDEAPRARTA >Mature_652_residues MKSTTLVDEFEHYSSWRDAVRLRVVALRDWLHAHELGDAESALRLDQLLGRLQADTLNVAFVAEFSRGKSELINAIFFSD YSRRVLPSAAGRTTMCPTELAYTPARRPSLRLLPIETKAQAGSIADFKRDDDAWTELPLDLDSAANMSETLRHLADTIPA DRATATAYGLIDPDDQETLRSLERDGSIAIPRWRHALINFPHPLLKQGLVILDTPGLNAIGTEPELTLNMLPAAHAVLFL LAADTGVTKSDIAIWREHIAAAHGTSRARLVVLNKIDGLWDDLKTAAEIDAEVARQAATTAALLDVAPGQVYPVSAQKAL VAKVRSDDALLAKSRLPELEAALTQELIPCKQALVAESASAAVEDVVIKTTELLETRLAILQDQIDELQGLRGKNRDAIQ HMMAKANEDKRQFERGLQQFNALRNVFASQVETLRRQLGMSALRRAVRDTRHAMEKSRFSGGLRDAMGRFFRQVDDNLEA SAASISEIRMMTAMYRKFSDEHGLAAVNPPDYGLGKYRKEMVRLERIFDERFNTVFKMLTVGQSQLTARFFETLASKVVQ VFELANNETEAWLKALIAPMETQVREHEIQLRRRLENVSRIHAATETLDERIVELETSMAGVGDQLENLARINAGIGAAL AVHDEAPRARTA
Specific function: Unknown
COG id: COG0699
COG function: function code R; Predicted GTPases (dynamin-related)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72456; Mature: 72456
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: PS00141 ASP_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSTTLVDEFEHYSSWRDAVRLRVVALRDWLHAHELGDAESALRLDQLLGRLQADTLNVA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEE FVAEFSRGKSELINAIFFSDYSRRVLPSAAGRTTMCPTELAYTPARRPSLRLLPIETKAQ EEEHHHCCHHHHHHHHHHHCHHHHHCCCCCCCCCCCCHHHCCCCCCCCCEEEEEECCCCC AGSIADFKRDDDAWTELPLDLDSAANMSETLRHLADTIPADRATATAYGLIDPDDQETLR CCCCHHCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHH SLERDGSIAIPRWRHALINFPHPLLKQGLVILDTPGLNAIGTEPELTLNMLPAAHAVLFL HHHCCCCCCCHHHHHHHHCCCCHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH LAADTGVTKSDIAIWREHIAAAHGTSRARLVVLNKIDGLWDDLKTAAEIDAEVARQAATT HHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH AALLDVAPGQVYPVSAQKALVAKVRSDDALLAKSRLPELEAALTQELIPCKQALVAESAS HHHHCCCCCCEEECCHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH AAVEDVVIKTTELLETRLAILQDQIDELQGLRGKNRDAIQHMMAKANEDKRQFERGLQQF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHH NALRNVFASQVETLRRQLGMSALRRAVRDTRHAMEKSRFSGGLRDAMGRFFRQVDDNLEA HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHH SAASISEIRMMTAMYRKFSDEHGLAAVNPPDYGLGKYRKEMVRLERIFDERFNTVFKMLT HHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VGQSQLTARFFETLASKVVQVFELANNETEAWLKALIAPMETQVREHEIQLRRRLENVSR CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IHAATETLDERIVELETSMAGVGDQLENLARINAGIGAALAVHDEAPRARTA HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCC >Mature Secondary Structure MKSTTLVDEFEHYSSWRDAVRLRVVALRDWLHAHELGDAESALRLDQLLGRLQADTLNVA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEE FVAEFSRGKSELINAIFFSDYSRRVLPSAAGRTTMCPTELAYTPARRPSLRLLPIETKAQ EEEHHHCCHHHHHHHHHHHCHHHHHCCCCCCCCCCCCHHHCCCCCCCCCEEEEEECCCCC AGSIADFKRDDDAWTELPLDLDSAANMSETLRHLADTIPADRATATAYGLIDPDDQETLR CCCCHHCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHH SLERDGSIAIPRWRHALINFPHPLLKQGLVILDTPGLNAIGTEPELTLNMLPAAHAVLFL HHHCCCCCCCHHHHHHHHCCCCHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH LAADTGVTKSDIAIWREHIAAAHGTSRARLVVLNKIDGLWDDLKTAAEIDAEVARQAATT HHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH AALLDVAPGQVYPVSAQKALVAKVRSDDALLAKSRLPELEAALTQELIPCKQALVAESAS HHHHCCCCCCEEECCHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH AAVEDVVIKTTELLETRLAILQDQIDELQGLRGKNRDAIQHMMAKANEDKRQFERGLQQF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHH NALRNVFASQVETLRRQLGMSALRRAVRDTRHAMEKSRFSGGLRDAMGRFFRQVDDNLEA HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHH SAASISEIRMMTAMYRKFSDEHGLAAVNPPDYGLGKYRKEMVRLERIFDERFNTVFKMLT HHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VGQSQLTARFFETLASKVVQVFELANNETEAWLKALIAPMETQVREHEIQLRRRLENVSR CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IHAATETLDERIVELETSMAGVGDQLENLARINAGIGAALAVHDEAPRARTA HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA