| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316370
Identifier: 74316370
GI number: 74316370
Start: 370850
End: 371707
Strand: Direct
Name: 74316370
Synonym: Tbd_0352
Alternate gene names: NA
Gene position: 370850-371707 (Clockwise)
Preceding gene: 74316369
Following gene: 74316371
Centisome position: 12.74
GC content: 60.61
Gene sequence:
>858_bases ATGAATTTCAAACTCAACGCACTGGTGGCCGCAGCTTTACTGGCTTCCGGTTCCGCACACGCTATCACCGCAACGGATGA CGTCGCCACTGGCAATGCCTATCTGCTGCTGACCGTGCTCGATGCAAACTACAACGGCGGCGTGGGTCGTTCCTATACCC GTTCGCTCGAGGTCGCGATGAACGAGTTCGGCACGGGTAACCGTACCACCGGCGGCTTCACGACCAACGTCGACAGCCTG GGCAGCAGCAACCAGACGTGGAGCACGGGCGCGCTGTGGGGCACTTTTACGGCGGGCATGGATGCAGCCACGATCGCTGG GCTGCAGTGGGACGTGACGGCGCTGGATGGCTTTGGTACTTCGTCGGCTGACCAGAAGCGTGTCCTGACCACTTCGGCGA CCAATCTGGTTGATGCGCAAGCAGCTGCTGGTGTCGCCACCAACAATACTGAACTCACTTTCGCTGTGATCAACCAGGAT GTTTACTGGGATGCGGCTATCGGCGCCATGGGCACCGATACCGAGATCATCGTTGACGATACGTCTTCGATGGCGTTTGC GATCAGTGCTGCAGTGCACAGCACCAACTTCTCCGGGAAGACCCCGGATTTCAGCACTGTGGGCAACGTTGGTGACAGCA TGGGTTTTTACTACCTGACCCGCAGCGGCAGCAGCAATACGGCTGAGGCAACCGCTGTGGCGTATGGCGTGAATGGCGAT GCCACCTTCACTTTCGCCGCCGACGGTTCCCTGACCTTTGCGCCCACCGTGGCCGCCGTTCCCGAGGCTTCGACCTACGG CATGATCCTGGCCGGTCTGGGCCTGGTCGGCTTTATGGCGCGTCGCCGCGTCGCCTGA
Upstream 100 bases:
>100_bases TATTTCCGGTTGGTCCGCATGCAGTCCGCGGGCCTTCCCCACAGGGGGGCGGAAAGCTTCACCACTTTCTGGGACTTTTA CTTAAAAGAGGAGCGCTTAC
Downstream 100 bases:
>100_bases TGCACCTTGCCCCGCCGCATGGCGGGACTTTCCATCGTTAATCGATTACGTCAAAGGGATAGACCAATGAAACTGCATCA AATCGCCGTCGCCGTTGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MNFKLNALVAAALLASGSAHAITATDDVATGNAYLLLTVLDANYNGGVGRSYTRSLEVAMNEFGTGNRTTGGFTTNVDSL GSSNQTWSTGALWGTFTAGMDAATIAGLQWDVTALDGFGTSSADQKRVLTTSATNLVDAQAAAGVATNNTELTFAVINQD VYWDAAIGAMGTDTEIIVDDTSSMAFAISAAVHSTNFSGKTPDFSTVGNVGDSMGFYYLTRSGSSNTAEATAVAYGVNGD ATFTFAADGSLTFAPTVAAVPEASTYGMILAGLGLVGFMARRRVA
Sequences:
>Translated_285_residues MNFKLNALVAAALLASGSAHAITATDDVATGNAYLLLTVLDANYNGGVGRSYTRSLEVAMNEFGTGNRTTGGFTTNVDSL GSSNQTWSTGALWGTFTAGMDAATIAGLQWDVTALDGFGTSSADQKRVLTTSATNLVDAQAAAGVATNNTELTFAVINQD VYWDAAIGAMGTDTEIIVDDTSSMAFAISAAVHSTNFSGKTPDFSTVGNVGDSMGFYYLTRSGSSNTAEATAVAYGVNGD ATFTFAADGSLTFAPTVAAVPEASTYGMILAGLGLVGFMARRRVA >Mature_285_residues MNFKLNALVAAALLASGSAHAITATDDVATGNAYLLLTVLDANYNGGVGRSYTRSLEVAMNEFGTGNRTTGGFTTNVDSL GSSNQTWSTGALWGTFTAGMDAATIAGLQWDVTALDGFGTSSADQKRVLTTSATNLVDAQAAAGVATNNTELTFAVINQD VYWDAAIGAMGTDTEIIVDDTSSMAFAISAAVHSTNFSGKTPDFSTVGNVGDSMGFYYLTRSGSSNTAEATAVAYGVNGD ATFTFAADGSLTFAPTVAAVPEASTYGMILAGLGLVGFMARRRVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29120; Mature: 29120
Theoretical pI: Translated: 4.04; Mature: 4.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFKLNALVAAALLASGSAHAITATDDVATGNAYLLLTVLDANYNGGVGRSYTRSLEVAM CCEEHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHH NEFGTGNRTTGGFTTNVDSLGSSNQTWSTGALWGTFTAGMDAATIAGLQWDVTALDGFGT HHCCCCCCCCCCEEECHHHCCCCCCCEECCCEEEECCCCCCCCEEECCEEEEEEECCCCC SSADQKRVLTTSATNLVDAQAAAGVATNNTELTFAVINQDVYWDAAIGAMGTDTEIIVDD CCCCCCEEEEECCCHHHHHHHHCCEEECCCEEEEEEECCCEEEEHCCCCCCCCCEEEEEC TSSMAFAISAAVHSTNFSGKTPDFSTVGNVGDSMGFYYLTRSGSSNTAEATAVAYGVNGD CCCEEEEEEEEEECCCCCCCCCCCHHHCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCC ATFTFAADGSLTFAPTVAAVPEASTYGMILAGLGLVGFMARRRVA EEEEEEECCCEEECCCEEECCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNFKLNALVAAALLASGSAHAITATDDVATGNAYLLLTVLDANYNGGVGRSYTRSLEVAM CCEEHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHH NEFGTGNRTTGGFTTNVDSLGSSNQTWSTGALWGTFTAGMDAATIAGLQWDVTALDGFGT HHCCCCCCCCCCEEECHHHCCCCCCCEECCCEEEECCCCCCCCEEECCEEEEEEECCCCC SSADQKRVLTTSATNLVDAQAAAGVATNNTELTFAVINQDVYWDAAIGAMGTDTEIIVDD CCCCCCEEEEECCCHHHHHHHHCCEEECCCEEEEEEECCCEEEEHCCCCCCCCCEEEEEC TSSMAFAISAAVHSTNFSGKTPDFSTVGNVGDSMGFYYLTRSGSSNTAEATAVAYGVNGD CCCEEEEEEEEEECCCCCCCCCCCHHHCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCC ATFTFAADGSLTFAPTVAAVPEASTYGMILAGLGLVGFMARRRVA EEEEEEECCCEEECCCEEECCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA