Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74316365

Identifier: 74316365

GI number: 74316365

Start: 365651

End: 366670

Strand: Direct

Name: 74316365

Synonym: Tbd_0347

Alternate gene names: NA

Gene position: 365651-366670 (Clockwise)

Preceding gene: 74316362

Following gene: 74316369

Centisome position: 12.57

GC content: 60.29

Gene sequence:

>1020_bases
ATGCCGGGTTTTTCCGCCGATCTTGATTGCGTACCCGGAAGCATCCGGTCGCAGGTTGAGGAAAACTATCGGGTCTGGAG
ACGCGCATGGATTACAAGCTCTGCGCAGCCTGCGGTCAACTCTTCAGGCCGCGCCCTCAGACTCCAACCCAGACATACTG
CCCAGCGCAGGACTGCCAGCGAGAGCGGCGCCGACGCTGGCGGCGAGCTAAACGGCATCACGATCCCGACTACTGCGACA
ACCAGGTATGCGGAGCGCCGGGGTATCAGCATCGTGCGTACCTATGCTGACGAGGGCAAGAGCGGTCTGCGCATCGATGG
ACGCCGAGCGCTGCAGCAACTGATCAAGGATGTTGAAGGCGGGACGGCCGATTTCCAGATCATTTTGGTTTACGACGTCA
GCCGCTGGGGTCGCTTCCAGGATGCCGACGAAAGCGCCTACTACGAGTGCATCTGCCGCCGCGCAGGCATACAGGTCGCT
TATTGCGCCGAGCAGTTCGAGAATGACGGCTCTCCCGTGTCTACCATCGTCAAGGGCGTTAAGCGTGCCATGGCCCGCGA
GTACAGCCGTGAGCTGTCCGCCAAGGTGTTTGCAGGCCAATGCCGCCTGATCGAACTCGGCTACCGCCAAGGCAGCCCAG
CCGGCTTCGGTCTACGCCGGGTCCTCATCGATCAGCAAGGTTCGTCAAAGGGCATGCTAGCGCGTGGCGAACAGAAGAGC
CTGCAGACCGATCGCGTCGTCTTGATGCCGGGGCCCGGGGACGAGATTCGCATCGTCCACCAGATCTATCGGTGGTTCAT
CGATGAGGGGCTGGGCGACTCCGAGATCGCCATGCGCCTCAACAGCATACGGGTGCGCACCGATTTTGACCGGTACTGGA
CGCGGGCCACGGTGCATGAGGTGCTGACCAACGAGAAATACATCGGGAACAACGTCTACAACCGCATTTCCTTCAAGCTC
AAGAAACTCCGCGTGGTCAATACGCCTGACATGTGGGATCAAAAAGGAAGGCGCGTTTGA

Upstream 100 bases:

>100_bases
AGTTAATAGGGCCGTTGATGCTGTAGCGTGTTAGGAACGCAGCGAGCCGAGACAGGTGTGGGGCGGCGGTACTTGATAAG
GGCGCTAAAACGCGCTGGGG

Downstream 100 bases:

>100_bases
GCCCGTCATGCCGGCGGACATTGTCTCTACGAGACGGTAACCCGGACTCTGTGCGAATGTGGCGCGGTGGGGGTGGGTTT
TCTTCGAGCTTACGGCGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: Resolvase Domain-Containing Protein; Site-Specific Recombinase; Resolvase Family Site-Specific Recombinase; Resolvase Domain; Recombinase-Like Protein; Recombinase Protein; Site-Specific Recombinase Resolvase Family

Number of amino acids: Translated: 339; Mature: 338

Protein sequence:

>339_residues
MPGFSADLDCVPGSIRSQVEENYRVWRRAWITSSAQPAVNSSGRALRLQPRHTAQRRTASESGADAGGELNGITIPTTAT
TRYAERRGISIVRTYADEGKSGLRIDGRRALQQLIKDVEGGTADFQIILVYDVSRWGRFQDADESAYYECICRRAGIQVA
YCAEQFENDGSPVSTIVKGVKRAMAREYSRELSAKVFAGQCRLIELGYRQGSPAGFGLRRVLIDQQGSSKGMLARGEQKS
LQTDRVVLMPGPGDEIRIVHQIYRWFIDEGLGDSEIAMRLNSIRVRTDFDRYWTRATVHEVLTNEKYIGNNVYNRISFKL
KKLRVVNTPDMWDQKGRRV

Sequences:

>Translated_339_residues
MPGFSADLDCVPGSIRSQVEENYRVWRRAWITSSAQPAVNSSGRALRLQPRHTAQRRTASESGADAGGELNGITIPTTAT
TRYAERRGISIVRTYADEGKSGLRIDGRRALQQLIKDVEGGTADFQIILVYDVSRWGRFQDADESAYYECICRRAGIQVA
YCAEQFENDGSPVSTIVKGVKRAMAREYSRELSAKVFAGQCRLIELGYRQGSPAGFGLRRVLIDQQGSSKGMLARGEQKS
LQTDRVVLMPGPGDEIRIVHQIYRWFIDEGLGDSEIAMRLNSIRVRTDFDRYWTRATVHEVLTNEKYIGNNVYNRISFKL
KKLRVVNTPDMWDQKGRRV
>Mature_338_residues
PGFSADLDCVPGSIRSQVEENYRVWRRAWITSSAQPAVNSSGRALRLQPRHTAQRRTASESGADAGGELNGITIPTTATT
RYAERRGISIVRTYADEGKSGLRIDGRRALQQLIKDVEGGTADFQIILVYDVSRWGRFQDADESAYYECICRRAGIQVAY
CAEQFENDGSPVSTIVKGVKRAMAREYSRELSAKVFAGQCRLIELGYRQGSPAGFGLRRVLIDQQGSSKGMLARGEQKSL
QTDRVVLMPGPGDEIRIVHQIYRWFIDEGLGDSEIAMRLNSIRVRTDFDRYWTRATVHEVLTNEKYIGNNVYNRISFKLK
KLRVVNTPDMWDQKGRRV

Specific function: Unknown

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38239; Mature: 38108

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGFSADLDCVPGSIRSQVEENYRVWRRAWITSSAQPAVNSSGRALRLQPRHTAQRRTAS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHCC
ESGADAGGELNGITIPTTATTRYAERRGISIVRTYADEGKSGLRIDGRRALQQLIKDVEG
CCCCCCCCCCCCEEECCCCHHHHHHHCCCEEEEEEHHCCCCCCEECHHHHHHHHHHHHCC
GTADFQIILVYDVSRWGRFQDADESAYYECICRRAGIQVAYCAEQFENDGSPVSTIVKGV
CCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEHHHHHCCCCCHHHHHHHHH
KRAMAREYSRELSAKVFAGQCRLIELGYRQGSPAGFGLRRVLIDQQGSSKGMLARGEQKS
HHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCEECCCCCC
LQTDRVVLMPGPGDEIRIVHQIYRWFIDEGLGDSEIAMRLNSIRVRTDFDRYWTRATVHE
CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEEEECHHHHHHHHHHHH
VLTNEKYIGNNVYNRISFKLKKLRVVNTPDMWDQKGRRV
HHCCCCCCCCHHHHHHHHEEEEEEEECCCCHHCCCCCCC
>Mature Secondary Structure 
PGFSADLDCVPGSIRSQVEENYRVWRRAWITSSAQPAVNSSGRALRLQPRHTAQRRTAS
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHCC
ESGADAGGELNGITIPTTATTRYAERRGISIVRTYADEGKSGLRIDGRRALQQLIKDVEG
CCCCCCCCCCCCEEECCCCHHHHHHHCCCEEEEEEHHCCCCCCEECHHHHHHHHHHHHCC
GTADFQIILVYDVSRWGRFQDADESAYYECICRRAGIQVAYCAEQFENDGSPVSTIVKGV
CCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEHHHHHCCCCCHHHHHHHHH
KRAMAREYSRELSAKVFAGQCRLIELGYRQGSPAGFGLRRVLIDQQGSSKGMLARGEQKS
HHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCEECCCCCC
LQTDRVVLMPGPGDEIRIVHQIYRWFIDEGLGDSEIAMRLNSIRVRTDFDRYWTRATVHE
CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEEEECHHHHHHHHHHHH
VLTNEKYIGNNVYNRISFKLKKLRVVNTPDMWDQKGRRV
HHCCCCCCCCHHHHHHHHEEEEEEEECCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA