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The map label for this gene is rdxB [H]

Identifier: 74316360

GI number: 74316360

Start: 360758

End: 362194

Strand: Direct

Name: rdxB [H]

Synonym: Tbd_0342

Alternate gene names: 74316360

Gene position: 360758-362194 (Clockwise)

Preceding gene: 74316359

Following gene: 74316361

Centisome position: 12.4

GC content: 65.21

Gene sequence:

>1437_bases
ATGCAAAAAGGTCTAGAAGAACAGGTCGGTCTCTACCAGAAGCGGATCCCGATCTTCACGCGTTCCGTGAAGGGGCCTTT
CCGGCGCTTCAAGACCTCGGTGCTGGTGCTCGCCTACGCCGTGTACTTCCTGCTGCCGTGGCTGCCGTGGTCGCGGCTCG
ATGCGCCGGCGCAGGCCGTGCTGTTCGATCTTCCCGGACGGCGTTTCCTGATCTTCGGGCTGACCGTCTATCCGCAGGAC
GTGGTCTGGCTGGCGCTGCTGCTGTTCATCGCGGCTATCTTGCTGTTTTTCGTGACCGGGCTCTTCGGTCGCGCGTTCTG
CGGCTACTTCTGCTTTCAGACCCTGTGGACCGATTTCTTCATCTGGATCGAGCACAAGATCCAGGGCGAGCGCCCGGCAC
GGGTGCGCCTCTATCGCCAGCCCTGGGATCGCGAAAAGCTGCTGAAGGTCGGAGGGACGCACGCGTTATGGCTGCTGGCC
GCCTTTTGGACCGGCATCACCTTCGTCGCCTACTTCGCGTACGCGCCGCAGCTCGTGGTGGATTTCTTCGCCGGCGCCGC
CGCACCGGCGGCCTACATCACGGTCACCATCCTGACCCTGTCGACTTACGCCGCGGCGGGCCTCATGCGCGAGCAGATCT
GCACCTACGTCTGCCCCTACGGCCGCTTCCAGAGCGTGATGTACGAAGCCGAAACGCTTGCCGTGCATTACGACGCGAGG
CGGGGCGAGGGCACGCGCGGCCGCGCCCCCGCGCGCGCGGGACAGCGCACGCTTGCCGAGCGCCATGAAAAGGGCGTGGG
CGACTGCGTCGACTGCGGACTCTGCGTACAAGTCTGCCCGGTTGGCATCGATATCCGCGACGGCCTGCAATACAAGTGCA
TCTCCTGCGGCCTGTGCATCGACGCGTGCAACACGATCATGGACTCCTTCAGTTTTCCGCGCGGCCTGATCCGCTACGAC
TCGGAGAAGAACCTCGCCGCCGCCACGCCGACGAAGCCGAAGGCGGACTGGAAGCGTTTGAAGACGATCGGCTACGGGCT
CGCCCTCGTGCTGATGAGTGCGTATCTCGTCTACAGCATCAGCACGCGCGGCAGCTTCGATCGCGCCGTCAACCAGATCC
GCCAGCCGCTCTACGTCGTGCTCTCGAACGGCGACATCCGCAACCGTTACCAGATCCGCATCACCAACAAGTCGGGGCAG
GACGAGACCTATGCGATCAGCGCACGCGGCATCCCGAGCGGGGCGCTCGACCTCGGCAACTTCCGCGAGATCACCGTGAA
GCCTGGCCACAGCGGAGTCGTCCAGGCGAGCGTCCGGCTGTCGCCCGAGGCCGCCGCGAGGACCCAGAACTTCGAACTCG
TCATCGCGCCGCGGGGCAAGCCGGGTGAGGCGCGGACCGAGAGCGTGCGTTTCGACAGCCCGAGGCCACGCGGATGA

Upstream 100 bases:

>100_bases
GTACACGAGTTGGGCGGAGGTCAGTAAGACTCAGGCCGATGACGACCAAAGCCCCCGATCTCGGGGGCTTTTGTTTCCAG
AGCAGCGAATCGCATACGCC

Downstream 100 bases:

>100_bases
GCACGCTCACGACCCTTTTCGGCGGCCTCGCCGCGGTCTTCGTGCTGTTCGCCCTGGGCGGCCTGATTCGCGGCCTGCCG
CTCGCGCTGCGTGCCGCACT

Product: iron-sulfur cluster-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 478; Mature: 478

Protein sequence:

>478_residues
MQKGLEEQVGLYQKRIPIFTRSVKGPFRRFKTSVLVLAYAVYFLLPWLPWSRLDAPAQAVLFDLPGRRFLIFGLTVYPQD
VVWLALLLFIAAILLFFVTGLFGRAFCGYFCFQTLWTDFFIWIEHKIQGERPARVRLYRQPWDREKLLKVGGTHALWLLA
AFWTGITFVAYFAYAPQLVVDFFAGAAAPAAYITVTILTLSTYAAAGLMREQICTYVCPYGRFQSVMYEAETLAVHYDAR
RGEGTRGRAPARAGQRTLAERHEKGVGDCVDCGLCVQVCPVGIDIRDGLQYKCISCGLCIDACNTIMDSFSFPRGLIRYD
SEKNLAAATPTKPKADWKRLKTIGYGLALVLMSAYLVYSISTRGSFDRAVNQIRQPLYVVLSNGDIRNRYQIRITNKSGQ
DETYAISARGIPSGALDLGNFREITVKPGHSGVVQASVRLSPEAAARTQNFELVIAPRGKPGEARTESVRFDSPRPRG

Sequences:

>Translated_478_residues
MQKGLEEQVGLYQKRIPIFTRSVKGPFRRFKTSVLVLAYAVYFLLPWLPWSRLDAPAQAVLFDLPGRRFLIFGLTVYPQD
VVWLALLLFIAAILLFFVTGLFGRAFCGYFCFQTLWTDFFIWIEHKIQGERPARVRLYRQPWDREKLLKVGGTHALWLLA
AFWTGITFVAYFAYAPQLVVDFFAGAAAPAAYITVTILTLSTYAAAGLMREQICTYVCPYGRFQSVMYEAETLAVHYDAR
RGEGTRGRAPARAGQRTLAERHEKGVGDCVDCGLCVQVCPVGIDIRDGLQYKCISCGLCIDACNTIMDSFSFPRGLIRYD
SEKNLAAATPTKPKADWKRLKTIGYGLALVLMSAYLVYSISTRGSFDRAVNQIRQPLYVVLSNGDIRNRYQIRITNKSGQ
DETYAISARGIPSGALDLGNFREITVKPGHSGVVQASVRLSPEAAARTQNFELVIAPRGKPGEARTESVRFDSPRPRG
>Mature_478_residues
MQKGLEEQVGLYQKRIPIFTRSVKGPFRRFKTSVLVLAYAVYFLLPWLPWSRLDAPAQAVLFDLPGRRFLIFGLTVYPQD
VVWLALLLFIAAILLFFVTGLFGRAFCGYFCFQTLWTDFFIWIEHKIQGERPARVRLYRQPWDREKLLKVGGTHALWLLA
AFWTGITFVAYFAYAPQLVVDFFAGAAAPAAYITVTILTLSTYAAAGLMREQICTYVCPYGRFQSVMYEAETLAVHYDAR
RGEGTRGRAPARAGQRTLAERHEKGVGDCVDCGLCVQVCPVGIDIRDGLQYKCISCGLCIDACNTIMDSFSFPRGLIRYD
SEKNLAAATPTKPKADWKRLKTIGYGLALVLMSAYLVYSISTRGSFDRAVNQIRQPLYVVLSNGDIRNRYQIRITNKSGQ
DETYAISARGIPSGALDLGNFREITVKPGHSGVVQASVRLSPEAAARTQNFELVIAPRGKPGEARTESVRFDSPRPRG

Specific function: Involved in a membrane generated redox signal; required to maintain repression of photosynthesis gene expression in the presence of oxygen [H]

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR014116
- InterPro:   IPR013783 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53520; Mature: 53520

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKGLEEQVGLYQKRIPIFTRSVKGPFRRFKTSVLVLAYAVYFLLPWLPWSRLDAPAQAV
CCCCHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCEE
LFDLPGRRFLIFGLTVYPQDVVWLALLLFIAAILLFFVTGLFGRAFCGYFCFQTLWTDFF
EEECCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IWIEHKIQGERPARVRLYRQPWDREKLLKVGGTHALWLLAAFWTGITFVAYFAYAPQLVV
EEEEEECCCCCCCEEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DFFAGAAAPAAYITVTILTLSTYAAAGLMREQICTYVCPYGRFQSVMYEAETLAVHYDAR
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEEEEECC
RGEGTRGRAPARAGQRTLAERHEKGVGDCVDCGLCVQVCPVGIDIRDGLQYKCISCGLCI
CCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHCHHHHHHCCCCCCCCCCCEEEHHHHHHH
DACNTIMDSFSFPRGLIRYDSEKNLAAATPTKPKADWKRLKTIGYGLALVLMSAYLVYSI
HHHHHHHHHCCCCCHHEEECCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEE
STRGSFDRAVNQIRQPLYVVLSNGDIRNRYQIRITNKSGQDETYAISARGIPSGALDLGN
CCCCCHHHHHHHHCCCEEEEEECCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCC
FREITVKPGHSGVVQASVRLSPEAAARTQNFELVIAPRGKPGEARTESVRFDSPRPRG
CEEEEECCCCCCEEEEEEEECCHHHHCCCCCEEEEECCCCCCCCCCCCEECCCCCCCC
>Mature Secondary Structure
MQKGLEEQVGLYQKRIPIFTRSVKGPFRRFKTSVLVLAYAVYFLLPWLPWSRLDAPAQAV
CCCCHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCEE
LFDLPGRRFLIFGLTVYPQDVVWLALLLFIAAILLFFVTGLFGRAFCGYFCFQTLWTDFF
EEECCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IWIEHKIQGERPARVRLYRQPWDREKLLKVGGTHALWLLAAFWTGITFVAYFAYAPQLVV
EEEEEECCCCCCCEEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DFFAGAAAPAAYITVTILTLSTYAAAGLMREQICTYVCPYGRFQSVMYEAETLAVHYDAR
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEEEEECC
RGEGTRGRAPARAGQRTLAERHEKGVGDCVDCGLCVQVCPVGIDIRDGLQYKCISCGLCI
CCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHCHHHHHHCCCCCCCCCCCEEEHHHHHHH
DACNTIMDSFSFPRGLIRYDSEKNLAAATPTKPKADWKRLKTIGYGLALVLMSAYLVYSI
HHHHHHHHHCCCCCHHEEECCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEE
STRGSFDRAVNQIRQPLYVVLSNGDIRNRYQIRITNKSGQDETYAISARGIPSGALDLGN
CCCCCHHHHHHHHCCCEEEEEECCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCC
FREITVKPGHSGVVQASVRLSPEAAARTQNFELVIAPRGKPGEARTESVRFDSPRPRG
CEEEEECCCCCCEEEEEEEECCHHHHCCCCCEEEEECCCCCCCCCCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9068641; 7592416 [H]