| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316323
Identifier: 74316323
GI number: 74316323
Start: 326880
End: 327905
Strand: Direct
Name: 74316323
Synonym: Tbd_0305
Alternate gene names: NA
Gene position: 326880-327905 (Clockwise)
Preceding gene: 74316322
Following gene: 74316325
Centisome position: 11.23
GC content: 66.47
Gene sequence:
>1026_bases ATGCACGTCCCGTGGAAAGTCAGGAACGCCGCGCGGCTCACGCGCAACGGCCTCGCGTTCGCGCAGCACAAGGCCGGCGC CGCGCTGCGGCGCCCGCAAGGGAAGAAGGTCGTGTTTTGCTGCAATTTCCACGGCACGTCGGGCGCGACGATCGCCATCG CGCGCATCGCCGACCTGCTGGCCAGCCGCTACGCCGTGAGTTTCGTCGCCGGCCCGGCGAGCGACTACAACGCAATGCTC GGCACGGCCGTCACGCTGGTGTCGCCGCGCGTGCTGCAGCAGGAGACCTTCGATCTCTACGTCTGCGACGGCCACATGGA CGAGTCGTTCTTCGCCTGGCTCGCGGCGCATGAGCGCCTGTGTCTGCTCACGATCCACGGCGTGCTGCGCAAGGATAACA AGCTGGAAAAGGTGCACTTGGCGACCCGCTCGCATCTCGTCAGCGAAATCCAGTTCATGCATCACGCGGTCGACCGCTCG CGCTACTTCGTCATCCCCAATTACTGCGAGCGGATCGCAAAGAGGCAGCGTACGCGCAACGTCGGCATCGTCGGCCGCCT CGACGATCCCAAGAAGAACGTCGCGGCCGCACTCGAGGTCGCGCGGCGCTCGTCGGCTGCGCAGATTCATCTTTGGGGCG GCGCCGACAGCCACGCGCCCGACGGCAGGGTCAGCGTCCACGCATGGAGCCGCGACAAGAATCGCATCTATGACTCCTTC GACGTGCTCGTTTCGATGTCCGAAGAGGAGTCGATGGGGCTTACCGTGATCGAGGCGATGTCGTGCGGGATTCCGTGCGT GCTCGCCGACATTCCGGGATTCCAGATCTACCGCGGCTGCCCCGGCGTCGCGCTGGTGCCGCTTGGCGATCGCGACGCCG CCGTCGAATGGGTCGACCGGTTTCTCGACGCGCGCGCCGAACTCGCGCCGGCCCTCATCGCCCGCTGGCAAGCGCATTAC TCGCGGGATGCGGTCGCCGCACAGTGGTTTCGCGAAGTCGAGGCGCTGACTTCACACGCCGCCTGA
Upstream 100 bases:
>100_bases CGGCTGCTGCGCCGGCCGACGAAGCGCCTGCGCCGGCGAAGATCGGATCGCCGACCAATCCTTACTGCCGGTTCTGCCCC GATTAGGCCCGGCCGCGGCG
Downstream 100 bases:
>100_bases TCGCACTGCGGGGGCGTTCAGCCGCCGCTGTCGAGGAAGCTTTGCAGCCGTGCCCAGAGTTCGGCCTTGACGTCGGGATG CGCGTCCGACACGTCGTGCT
Product: glycosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MHVPWKVRNAARLTRNGLAFAQHKAGAALRRPQGKKVVFCCNFHGTSGATIAIARIADLLASRYAVSFVAGPASDYNAML GTAVTLVSPRVLQQETFDLYVCDGHMDESFFAWLAAHERLCLLTIHGVLRKDNKLEKVHLATRSHLVSEIQFMHHAVDRS RYFVIPNYCERIAKRQRTRNVGIVGRLDDPKKNVAAALEVARRSSAAQIHLWGGADSHAPDGRVSVHAWSRDKNRIYDSF DVLVSMSEEESMGLTVIEAMSCGIPCVLADIPGFQIYRGCPGVALVPLGDRDAAVEWVDRFLDARAELAPALIARWQAHY SRDAVAAQWFREVEALTSHAA
Sequences:
>Translated_341_residues MHVPWKVRNAARLTRNGLAFAQHKAGAALRRPQGKKVVFCCNFHGTSGATIAIARIADLLASRYAVSFVAGPASDYNAML GTAVTLVSPRVLQQETFDLYVCDGHMDESFFAWLAAHERLCLLTIHGVLRKDNKLEKVHLATRSHLVSEIQFMHHAVDRS RYFVIPNYCERIAKRQRTRNVGIVGRLDDPKKNVAAALEVARRSSAAQIHLWGGADSHAPDGRVSVHAWSRDKNRIYDSF DVLVSMSEEESMGLTVIEAMSCGIPCVLADIPGFQIYRGCPGVALVPLGDRDAAVEWVDRFLDARAELAPALIARWQAHY SRDAVAAQWFREVEALTSHAA >Mature_341_residues MHVPWKVRNAARLTRNGLAFAQHKAGAALRRPQGKKVVFCCNFHGTSGATIAIARIADLLASRYAVSFVAGPASDYNAML GTAVTLVSPRVLQQETFDLYVCDGHMDESFFAWLAAHERLCLLTIHGVLRKDNKLEKVHLATRSHLVSEIQFMHHAVDRS RYFVIPNYCERIAKRQRTRNVGIVGRLDDPKKNVAAALEVARRSSAAQIHLWGGADSHAPDGRVSVHAWSRDKNRIYDSF DVLVSMSEEESMGLTVIEAMSCGIPCVLADIPGFQIYRGCPGVALVPLGDRDAAVEWVDRFLDARAELAPALIARWQAHY SRDAVAAQWFREVEALTSHAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37766; Mature: 37766
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHVPWKVRNAARLTRNGLAFAQHKAGAALRRPQGKKVVFCCNFHGTSGATIAIARIADLL CCCCCCCHHHHHHHHCCCHHHHHHCCHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHH ASRYAVSFVAGPASDYNAMLGTAVTLVSPRVLQQETFDLYVCDGHMDESFFAWLAAHERL HHHHHHEEEECCCCCHHHHHHHHHHHHCCHHHHCCCCEEEEECCCCCHHHHHHHHHCCCE CLLTIHGVLRKDNKLEKVHLATRSHLVSEIQFMHHAVDRSRYFVIPNYCERIAKRQRTRN EEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCC VGIVGRLDDPKKNVAAALEVARRSSAAQIHLWGGADSHAPDGRVSVHAWSRDKNRIYDSF CCEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCHHHHCC DVLVSMSEEESMGLTVIEAMSCGIPCVLADIPGFQIYRGCPGVALVPLGDRDAAVEWVDR HHEEECCCCCCCCHHHHHHHHCCCCEEEECCCCCEEECCCCCEEEEECCCCHHHHHHHHH FLDARAELAPALIARWQAHYSRDAVAAQWFREVEALTSHAA HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MHVPWKVRNAARLTRNGLAFAQHKAGAALRRPQGKKVVFCCNFHGTSGATIAIARIADLL CCCCCCCHHHHHHHHCCCHHHHHHCCHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHH ASRYAVSFVAGPASDYNAMLGTAVTLVSPRVLQQETFDLYVCDGHMDESFFAWLAAHERL HHHHHHEEEECCCCCHHHHHHHHHHHHCCHHHHCCCCEEEEECCCCCHHHHHHHHHCCCE CLLTIHGVLRKDNKLEKVHLATRSHLVSEIQFMHHAVDRSRYFVIPNYCERIAKRQRTRN EEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCC VGIVGRLDDPKKNVAAALEVARRSSAAQIHLWGGADSHAPDGRVSVHAWSRDKNRIYDSF CCEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCHHHHCC DVLVSMSEEESMGLTVIEAMSCGIPCVLADIPGFQIYRGCPGVALVPLGDRDAAVEWVDR HHEEECCCCCCCCHHHHHHHHCCCCEEEECCCCCEEECCCCCEEEEECCCCHHHHHHHHH FLDARAELAPALIARWQAHYSRDAVAAQWFREVEALTSHAA HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA