| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is asnB [H]
Identifier: 74316316
GI number: 74316316
Start: 319069
End: 320889
Strand: Reverse
Name: asnB [H]
Synonym: Tbd_0298
Alternate gene names: 74316316
Gene position: 320889-319069 (Counterclockwise)
Preceding gene: 74316324
Following gene: 74316298
Centisome position: 11.03
GC content: 68.81
Gene sequence:
>1821_bases ATGGATGGCATTTTTGGCTGGCTAGGCGCCGACGGCGCGCATCAGGACCTGATCCGGCAGATCGCGGGCGGCGATGCCGA CGCGGCCGGCCTGCGTCGATACCACAGCGCGGAACTCGGACTGGCGGCGCAGTCGCGCTTCGGCAAGGCCGACATCGCGG TCGAGGATGGACACGCGGTGGCGCTCATGGGACGCCCGCGCTTCGTCGACGCGGACCTCGCGCGCGTCGCCCGCGAAACC GGCCCGGCCGCCGCGGTCGCGCAGGGCTGGCGCAGCCACGGCGCCGGCCTGCCGGCGCGCATGCAGGGGAATTTCGCCTT CGCCGTGCTCGAGCCGCAGGCGAAGAAGGCCTGCCTCGTGCTCGACCGCATGGGTGCGGAACGCCTGGGCTACGCGCATC GCGGCGACCAGCTCGTTTTCGGCAGCAGCGTCCAGCACGTCGCCGCCCACCCTGCCGTCGGCCGCAACATCGAGCCGCAG GCGATCTACGACTACCTGTACTTCCACAACATCCCCGCGCCGCGCAGCCTCTACCGCGGCGTGCACAAGCTGCTGCCCGG ACAGATCGTCACGCTCGAGAACGGACGGCTCGCGACGCGCTTCTACTGGCACGCCGATTACACGCCGCACGACGCGGGCT TCGACGTGCAGCGCGACGCCTTCCGTCGCGTCCTCGACGCGGCCGTGCGCGACGCCGACGGGCCGGCGACCGCAGCGTTT CTCTCGGGCGGCACCGACAGTTCGACGGTCGTCGGCGCGCTGACGGCGGCGCGCGGCGGGCCCGTCGATACCTTCTCGAT CGGTTTCGACGCCGAGGGCTTCGACGAAATGGCGTATGCCCGCTGTGCCGCCGCGCGGTACGACAGCCGGCGCCACGAGT ACTACCTCAAGCCGGCCGACATCGTCACCGCGATTCCGCTGATCGCGCGCGAATACGACGAGCCCTTCGGCAACGACTCC GCGGTCCCGACCTATTTCTGCGCCCGCGCCGCGCGCGAAGCGGGCTTCGGACGCATGCTCGCCGGCGACGGCGGCGACGA GATATTCGGCGGCAACGCGCGCTACGCGAAGCAGAAGCTGTTCGAAAATTATTTCCGCGTGCCGGCGCCGCTGCGCCACG GCCTGATCGAGCCGCTGGCGACGCTTCCGGGCGTGTCCGATCACTTTCCGCTGTCCAAGCTCAAGAGCTACGTCCGCCAG GCGAACATGGGGCTGCCGCTGCGCATGGAAAGCTACAACTTCCTGCACCGCACGCCGCTCGACCAGATCTTCGCCGCCGA TTTCGTCGCCGCGGTCGATCCTTCGGCGGCGGATGCAGCGCTCACCGAGGTCTACGCGCGCACGGCGTCGGACCACTACA TCAACCGCATGATGCATCTCGACCTCAAGTTCACGCTCGCCGACAACGACCTGCGCAAGGTCGGCACGATGACCGAGGCG GCGGGGGTCGAGGTCGCCTACCCGCTGCTCGACGACCGCCTGGTCGCGCTCGCGAACCATCTTCCGGTCGACTGGAAGGT ACGCGGACAAGCGCTGCGCTGGTTCTTCAAGGAAGCCCTGCGCGACCTGCTGCCGGAAGAGATCATCAACAAGCGCAAGC ACGGCTTCGGCCTGCCGTTCGGCGTATGGAGCACACAACACGCGCCGCTCGCCGAACTCGTGCACGACAGTCTCTCGGAC TTCAAGCGCCGTGGCTGGGTCCAGCCGGGCTACCTCGACCACATGCTCGCGATGCAGCGTGGCCCGCACGCGAGCTACTA CGGCGTCATGATCTGGGTCGTGATGATGCTCGAGCGCTGGCTGCAGGCGAACGCGCACTAG
Upstream 100 bases:
>100_bases TGCCCCGTCCAGGCGGACGGGTCCGACAGGATTCGTGCCAACCTGCCGGGCTCGTTTATATTGGCGCCCATTATCCCGTA TCGCTTCGACCGCACACACG
Downstream 100 bases:
>100_bases CGCCGGTTCCACGCTGCGCTACCCCGCCGCGGCCTCGCGCCGCTTGCCGAATCCCCCCACGGGCACCGGCTGTTTCTGCA GCACGCCGGAGAATTTGGCG
Product: amidotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 606; Mature: 606
Protein sequence:
>606_residues MDGIFGWLGADGAHQDLIRQIAGGDADAAGLRRYHSAELGLAAQSRFGKADIAVEDGHAVALMGRPRFVDADLARVARET GPAAAVAQGWRSHGAGLPARMQGNFAFAVLEPQAKKACLVLDRMGAERLGYAHRGDQLVFGSSVQHVAAHPAVGRNIEPQ AIYDYLYFHNIPAPRSLYRGVHKLLPGQIVTLENGRLATRFYWHADYTPHDAGFDVQRDAFRRVLDAAVRDADGPATAAF LSGGTDSSTVVGALTAARGGPVDTFSIGFDAEGFDEMAYARCAAARYDSRRHEYYLKPADIVTAIPLIAREYDEPFGNDS AVPTYFCARAAREAGFGRMLAGDGGDEIFGGNARYAKQKLFENYFRVPAPLRHGLIEPLATLPGVSDHFPLSKLKSYVRQ ANMGLPLRMESYNFLHRTPLDQIFAADFVAAVDPSAADAALTEVYARTASDHYINRMMHLDLKFTLADNDLRKVGTMTEA AGVEVAYPLLDDRLVALANHLPVDWKVRGQALRWFFKEALRDLLPEEIINKRKHGFGLPFGVWSTQHAPLAELVHDSLSD FKRRGWVQPGYLDHMLAMQRGPHASYYGVMIWVVMMLERWLQANAH
Sequences:
>Translated_606_residues MDGIFGWLGADGAHQDLIRQIAGGDADAAGLRRYHSAELGLAAQSRFGKADIAVEDGHAVALMGRPRFVDADLARVARET GPAAAVAQGWRSHGAGLPARMQGNFAFAVLEPQAKKACLVLDRMGAERLGYAHRGDQLVFGSSVQHVAAHPAVGRNIEPQ AIYDYLYFHNIPAPRSLYRGVHKLLPGQIVTLENGRLATRFYWHADYTPHDAGFDVQRDAFRRVLDAAVRDADGPATAAF LSGGTDSSTVVGALTAARGGPVDTFSIGFDAEGFDEMAYARCAAARYDSRRHEYYLKPADIVTAIPLIAREYDEPFGNDS AVPTYFCARAAREAGFGRMLAGDGGDEIFGGNARYAKQKLFENYFRVPAPLRHGLIEPLATLPGVSDHFPLSKLKSYVRQ ANMGLPLRMESYNFLHRTPLDQIFAADFVAAVDPSAADAALTEVYARTASDHYINRMMHLDLKFTLADNDLRKVGTMTEA AGVEVAYPLLDDRLVALANHLPVDWKVRGQALRWFFKEALRDLLPEEIINKRKHGFGLPFGVWSTQHAPLAELVHDSLSD FKRRGWVQPGYLDHMLAMQRGPHASYYGVMIWVVMMLERWLQANAH >Mature_606_residues MDGIFGWLGADGAHQDLIRQIAGGDADAAGLRRYHSAELGLAAQSRFGKADIAVEDGHAVALMGRPRFVDADLARVARET GPAAAVAQGWRSHGAGLPARMQGNFAFAVLEPQAKKACLVLDRMGAERLGYAHRGDQLVFGSSVQHVAAHPAVGRNIEPQ AIYDYLYFHNIPAPRSLYRGVHKLLPGQIVTLENGRLATRFYWHADYTPHDAGFDVQRDAFRRVLDAAVRDADGPATAAF LSGGTDSSTVVGALTAARGGPVDTFSIGFDAEGFDEMAYARCAAARYDSRRHEYYLKPADIVTAIPLIAREYDEPFGNDS AVPTYFCARAAREAGFGRMLAGDGGDEIFGGNARYAKQKLFENYFRVPAPLRHGLIEPLATLPGVSDHFPLSKLKSYVRQ ANMGLPLRMESYNFLHRTPLDQIFAADFVAAVDPSAADAALTEVYARTASDHYINRMMHLDLKFTLADNDLRKVGTMTEA AGVEVAYPLLDDRLVALANHLPVDWKVRGQALRWFFKEALRDLLPEEIINKRKHGFGLPFGVWSTQHAPLAELVHDSLSD FKRRGWVQPGYLDHMLAMQRGPHASYYGVMIWVVMMLERWLQANAH
Specific function: Main asparagine synthetase in vegetative cells [H]
COG id: COG0367
COG function: function code E; Asparagine synthase (glutamine-hydrolyzing)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-2 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006426 - InterPro: IPR001962 - InterPro: IPR017932 - InterPro: IPR014729 [H]
Pfam domain/function: PF00733 Asn_synthase [H]
EC number: =6.3.5.4 [H]
Molecular weight: Translated: 66773; Mature: 66773
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGIFGWLGADGAHQDLIRQIAGGDADAAGLRRYHSAELGLAAQSRFGKADIAVEDGHAV CCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHCCCCCCEEEECCCEE ALMGRPRFVDADLARVARETGPAAAVAQGWRSHGAGLPARMQGNFAFAVLEPQAKKACLV EEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEECCCEEEEEECCCCHHHHHH LDRMGAERLGYAHRGDQLVFGSSVQHVAAHPAVGRNIEPQAIYDYLYFHNIPAPRSLYRG HHHHCHHHCCCCCCCCEEEECCCHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHH VHKLLPGQIVTLENGRLATRFYWHADYTPHDAGFDVQRDAFRRVLDAAVRDADGPATAAF HHHHCCCEEEEECCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHE LSGGTDSSTVVGALTAARGGPVDTFSIGFDAEGFDEMAYARCAAARYDSRRHEYYLKPAD ECCCCCCCHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEECHHH IVTAIPLIAREYDEPFGNDSAVPTYFCARAAREAGFGRMLAGDGGDEIFGGNARYAKQKL HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHH FENYFRVPAPLRHGLIEPLATLPGVSDHFPLSKLKSYVRQANMGLPLRMESYNFLHRTPL HHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCHHHCCCH DQIFAADFVAAVDPSAADAALTEVYARTASDHYINRMMHLDLKFTLADNDLRKVGTMTEA HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCHHHHHHCHHHH AGVEVAYPLLDDRLVALANHLPVDWKVRGQALRWFFKEALRDLLPEEIINKRKHGFGLPF CCCEEEHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCC GVWSTQHAPLAELVHDSLSDFKRRGWVQPGYLDHMLAMQRGPHASYYGVMIWVVMMLERW CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH LQANAH HHCCCC >Mature Secondary Structure MDGIFGWLGADGAHQDLIRQIAGGDADAAGLRRYHSAELGLAAQSRFGKADIAVEDGHAV CCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHCCCCCCEEEECCCEE ALMGRPRFVDADLARVARETGPAAAVAQGWRSHGAGLPARMQGNFAFAVLEPQAKKACLV EEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEECCCEEEEEECCCCHHHHHH LDRMGAERLGYAHRGDQLVFGSSVQHVAAHPAVGRNIEPQAIYDYLYFHNIPAPRSLYRG HHHHCHHHCCCCCCCCEEEECCCHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHH VHKLLPGQIVTLENGRLATRFYWHADYTPHDAGFDVQRDAFRRVLDAAVRDADGPATAAF HHHHCCCEEEEECCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHE LSGGTDSSTVVGALTAARGGPVDTFSIGFDAEGFDEMAYARCAAARYDSRRHEYYLKPAD ECCCCCCCHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEECHHH IVTAIPLIAREYDEPFGNDSAVPTYFCARAAREAGFGRMLAGDGGDEIFGGNARYAKQKL HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHH FENYFRVPAPLRHGLIEPLATLPGVSDHFPLSKLKSYVRQANMGLPLRMESYNFLHRTPL HHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCHHHCCCH DQIFAADFVAAVDPSAADAALTEVYARTASDHYINRMMHLDLKFTLADNDLRKVGTMTEA HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCHHHHHHCHHHH AGVEVAYPLLDDRLVALANHLPVDWKVRGQALRWFFKEALRDLLPEEIINKRKHGFGLPF CCCEEEHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCC GVWSTQHAPLAELVHDSLSDFKRRGWVQPGYLDHMLAMQRGPHASYYGVMIWVVMMLERW CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH LQANAH HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377; 8755891; 10498721 [H]