| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is yveL [H]
Identifier: 74316301
GI number: 74316301
Start: 300432
End: 301352
Strand: Direct
Name: yveL [H]
Synonym: Tbd_0283
Alternate gene names: 74316301
Gene position: 300432-301352 (Clockwise)
Preceding gene: 74316300
Following gene: 74316302
Centisome position: 10.32
GC content: 63.74
Gene sequence:
>921_bases ATGAGCATTATCGAAAAAGCCGCCGGCAAGATTGGCGGGGGCGCCCCGACCGGCGCGCAGGACGCCAACCTGATCGAAGG CGCGATGGCCAAGCAGCGCAGCAGCAGTCACGCCAATCCCTTCGTCGCCACGCCGGTCGAGCCGATGTTCAGCACGCCTG ACCCCGATCCGACGCTCGAGGGCAACAGCCAGGTGCAGTCGATCAACCTCGCGCGGCTGCACCGCATGGGCGTCGTCTCG CCCGATGCGGAAAAAAGCCAGATCGCCGAGGAGTTCCGCATCATCAAGCGGCCGCTCATCGCGAATGCCTTTGGACAGGG CGCCGCGCGCGTCAAGAACGGCAACCTCATCATGGTGACGAGCTCGCTGCCGGGCGAGGGCAAGAGCTTCTGCGCGATCA ATCTCGCGATCTCGATGGCGATGGAGATGGACCGCACCGTGCTGTTGATCGACGCCGACGTCGCCAAGCCGCGCGTGCCC GAGTATCTCGGCATCCATGCCGACAAGGGCCTGCTCGACGTGCTGCAGGACAAGGATCTCAAGTTGTCCGACGTGCTGAT CAAGACCGACATCGCCAAGCTGACCGTGCTGCCGGCCGGCCGCACCTACAAGCGCGCGACCGAATTGCTCGCGAGCGCGG CGATGACCCGTCTGGTCGAGGACATCGGCAACCGCTATCCCGACCGCATCATTCTCTTCGACTCGCCGCCGCTGCTCGCG ACCAGCGAATCGAGCGTGCTCGCTACCCACATGGGACAGATCGTCATGGTCGTCGAAGCGGAAAAGACCTCGCAGGAGGC CGTGCGCGAAGCGCTGAGCCACATCCAGTCCTGCGAAGTGATCGGGATGCTCCTCAACAAGACCACGCCGACCCCGGGTG CCGATTACTACTATGGCTACTATGGCAGCTACGGCAAATAA
Upstream 100 bases:
>100_bases GCCTGCTGACCTATCTGGCCGCGCTCGGTAGCCTGATTGCGGCTTACGGTGCGGTGATGGTCCTGCAGCTTGTCGTGACG CGCGCGGGTTAGGAGGGAGC
Downstream 100 bases:
>100_bases GCGTCGCTGCCGGGGCCGGCAGGGAGGCGCGCCGCGGGCGAGCCGCGTATGGCTTTGGTCGGCGTGTCTCGCGTTGGGCC ACGCGCCGTCGAGCCATGCC
Product: protein-tyrosine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MSIIEKAAGKIGGGAPTGAQDANLIEGAMAKQRSSSHANPFVATPVEPMFSTPDPDPTLEGNSQVQSINLARLHRMGVVS PDAEKSQIAEEFRIIKRPLIANAFGQGAARVKNGNLIMVTSSLPGEGKSFCAINLAISMAMEMDRTVLLIDADVAKPRVP EYLGIHADKGLLDVLQDKDLKLSDVLIKTDIAKLTVLPAGRTYKRATELLASAAMTRLVEDIGNRYPDRIILFDSPPLLA TSESSVLATHMGQIVMVVEAEKTSQEAVREALSHIQSCEVIGMLLNKTTPTPGADYYYGYYGSYGK
Sequences:
>Translated_306_residues MSIIEKAAGKIGGGAPTGAQDANLIEGAMAKQRSSSHANPFVATPVEPMFSTPDPDPTLEGNSQVQSINLARLHRMGVVS PDAEKSQIAEEFRIIKRPLIANAFGQGAARVKNGNLIMVTSSLPGEGKSFCAINLAISMAMEMDRTVLLIDADVAKPRVP EYLGIHADKGLLDVLQDKDLKLSDVLIKTDIAKLTVLPAGRTYKRATELLASAAMTRLVEDIGNRYPDRIILFDSPPLLA TSESSVLATHMGQIVMVVEAEKTSQEAVREALSHIQSCEVIGMLLNKTTPTPGADYYYGYYGSYGK >Mature_305_residues SIIEKAAGKIGGGAPTGAQDANLIEGAMAKQRSSSHANPFVATPVEPMFSTPDPDPTLEGNSQVQSINLARLHRMGVVSP DAEKSQIAEEFRIIKRPLIANAFGQGAARVKNGNLIMVTSSLPGEGKSFCAINLAISMAMEMDRTVLLIDADVAKPRVPE YLGIHADKGLLDVLQDKDLKLSDVLIKTDIAKLTVLPAGRTYKRATELLASAAMTRLVEDIGNRYPDRIILFDSPPLLAT SESSVLATHMGQIVMVVEAEKTSQEAVREALSHIQSCEVIGMLLNKTTPTPGADYYYGYYGSYGK
Specific function: Required For The Extracellular Polysaccharide Colanic Acid Synthesis. The Autophosphorylated Form Is Inactive. Probably Involved In The Export Of Colanic Acid From The Cell To Medium. [C]
COG id: COG0489
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Inner membrane (Probable) [C]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CpsD/CapB family [H]
Homologues:
Organism=Escherichia coli, GI87082032, Length=190, Percent_Identity=30.5263157894737, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1787216, Length=144, Percent_Identity=29.1666666666667, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR005702 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: =2.7.10.2 [H]
Molecular weight: Translated: 32857; Mature: 32726
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIIEKAAGKIGGGAPTGAQDANLIEGAMAKQRSSSHANPFVATPVEPMFSTPDPDPTLE CCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCC GNSQVQSINLARLHRMGVVSPDAEKSQIAEEFRIIKRPLIANAFGQGAARVKNGNLIMVT CCCCEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEE SSLPGEGKSFCAINLAISMAMEMDRTVLLIDADVAKPRVPEYLGIHADKGLLDVLQDKDL CCCCCCCCCEEEEHHHHHHHHHCCCEEEEEECCCCCCCCCHHHCCCCCCCHHHHHCCCCC KLSDVLIKTDIAKLTVLPAGRTYKRATELLASAAMTRLVEDIGNRYPDRIILFDSPPLLA CHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEE TSESSVLATHMGQIVMVVEAEKTSQEAVREALSHIQSCEVIGMLLNKTTPTPGADYYYGY CCCCCHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEC YGSYGK CCCCCC >Mature Secondary Structure SIIEKAAGKIGGGAPTGAQDANLIEGAMAKQRSSSHANPFVATPVEPMFSTPDPDPTLE CHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCC GNSQVQSINLARLHRMGVVSPDAEKSQIAEEFRIIKRPLIANAFGQGAARVKNGNLIMVT CCCCEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEE SSLPGEGKSFCAINLAISMAMEMDRTVLLIDADVAKPRVPEYLGIHADKGLLDVLQDKDL CCCCCCCCCEEEEHHHHHHHHHCCCEEEEEECCCCCCCCCHHHCCCCCCCHHHHHCCCCC KLSDVLIKTDIAKLTVLPAGRTYKRATELLASAAMTRLVEDIGNRYPDRIILFDSPPLLA CHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEE TSESSVLATHMGQIVMVVEAEKTSQEAVREALSHIQSCEVIGMLLNKTTPTPGADYYYGY CCCCCHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEC YGSYGK CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969506; 9384377 [H]