Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74316296

Identifier: 74316296

GI number: 74316296

Start: 296675

End: 297277

Strand: Reverse

Name: 74316296

Synonym: Tbd_0278

Alternate gene names: NA

Gene position: 297277-296675 (Counterclockwise)

Preceding gene: 74316297

Following gene: 74316295

Centisome position: 10.22

GC content: 67.0

Gene sequence:

>603_bases
GTGAAACGCTACAAGCTGCGTATTCCGGCGCCTGCGGGCAGGCTGGAAACGGTCATCGACGACCCGGAAAACAATCGCCA
GGGGCTGCTGCTCGTCGCCCACCCCCATCCGCTGCACGGCGGCAGCCTCGACAACAAGGTCGTGACGACGCTGGCCAAGG
CGGCGAACGAGGCGGGATGGGTCAGCGTGCGGCCGAACTTCCGTGGCGTCGGCATGAGCGACGGCGCCTTCGACGCCGGG
ATGGGCGAAACCGATGACCTGCTGGCCGTCGCCCGCTTCGTCGAAGCGAGCTACCCGGGCCTGCCCTGGGCGCTCGCCGG
TTTCTCCTTCGGCGCCTTCGTGCAGCATCGGCTGCGCCAGGAATTGCCGGCGAAACGCCTGATTCTGGTCGCGCCGGCGG
TGACGATGTACGAGTTCGACGCGGTGCCGGCCGATACGGTCGTGATCTTCGGCGAGGCCGACGAGCTGATCCCGCCACCC
GCGATCCGCCTGTGGGCCGAGAAACAGCAGCTGACGACCAAGGCGATCCCCGACGCGGGGCATTTCTTCCACGGCAAGCT
CAAGGAACTCAAACAGGCTTTTCTCGAGGCCTGCCCGTGCTGA

Upstream 100 bases:

>100_bases
CCGAAGGCGTCTGGTACACCTACGTCGACGAGAGCGACATCGACGAGATCTTCGAGGCCCACCTCAAGGAAGGGCGGATC
GTCGAGCGCCTGCGGCTCAG

Downstream 100 bases:

>100_bases
AGGTCCACGGCCTGACCAAGCGCTACGGCGACGTCGAAGTCGTGCGCGGCCTCGACCTGCACGTACGGCGCGGCGAATGT
TTCGGCCTGCTCGGGCCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MKRYKLRIPAPAGRLETVIDDPENNRQGLLLVAHPHPLHGGSLDNKVVTTLAKAANEAGWVSVRPNFRGVGMSDGAFDAG
MGETDDLLAVARFVEASYPGLPWALAGFSFGAFVQHRLRQELPAKRLILVAPAVTMYEFDAVPADTVVIFGEADELIPPP
AIRLWAEKQQLTTKAIPDAGHFFHGKLKELKQAFLEACPC

Sequences:

>Translated_200_residues
MKRYKLRIPAPAGRLETVIDDPENNRQGLLLVAHPHPLHGGSLDNKVVTTLAKAANEAGWVSVRPNFRGVGMSDGAFDAG
MGETDDLLAVARFVEASYPGLPWALAGFSFGAFVQHRLRQELPAKRLILVAPAVTMYEFDAVPADTVVIFGEADELIPPP
AIRLWAEKQQLTTKAIPDAGHFFHGKLKELKQAFLEACPC
>Mature_200_residues
MKRYKLRIPAPAGRLETVIDDPENNRQGLLLVAHPHPLHGGSLDNKVVTTLAKAANEAGWVSVRPNFRGVGMSDGAFDAG
MGETDDLLAVARFVEASYPGLPWALAGFSFGAFVQHRLRQELPAKRLILVAPAVTMYEFDAVPADTVVIFGEADELIPPP
AIRLWAEKQQLTTKAIPDAGHFFHGKLKELKQAFLEACPC

Specific function: Unknown

COG id: COG2945

COG function: function code R; Predicted hydrolase of the alpha/beta superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000383 [H]

Pfam domain/function: PF02129 Peptidase_S15 [H]

EC number: NA

Molecular weight: Translated: 21792; Mature: 21792

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRYKLRIPAPAGRLETVIDDPENNRQGLLLVAHPHPLHGGSLDNKVVTTLAKAANEAGW
CCCEEEECCCCCCCHHHEECCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCE
VSVRPNFRGVGMSDGAFDAGMGETDDLLAVARFVEASYPGLPWALAGFSFGAFVQHRLRQ
EEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHH
ELPAKRLILVAPAVTMYEFDAVPADTVVIFGEADELIPPPAIRLWAEKQQLTTKAIPDAG
HCCCCEEEEEECCEEEEEECCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
HFFHGKLKELKQAFLEACPC
CHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKRYKLRIPAPAGRLETVIDDPENNRQGLLLVAHPHPLHGGSLDNKVVTTLAKAANEAGW
CCCEEEECCCCCCCHHHEECCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCE
VSVRPNFRGVGMSDGAFDAGMGETDDLLAVARFVEASYPGLPWALAGFSFGAFVQHRLRQ
EEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHH
ELPAKRLILVAPAVTMYEFDAVPADTVVIFGEADELIPPPAIRLWAEKQQLTTKAIPDAG
HCCCCEEEEEECCEEEEEECCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
HFFHGKLKELKQAFLEACPC
CHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]