| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is resA [H]
Identifier: 74316290
GI number: 74316290
Start: 291988
End: 292536
Strand: Reverse
Name: resA [H]
Synonym: Tbd_0272
Alternate gene names: 74316290
Gene position: 292536-291988 (Counterclockwise)
Preceding gene: 74316291
Following gene: 74316277
Centisome position: 10.05
GC content: 69.58
Gene sequence:
>549_bases ATGACGCTTCGTAATCCCCTCGCCGCCAGCTTCGCTGTGCTGGGCCTCACCGTACTGGGCCTCGCGCCGCCCGCCACGGC GGCCGACCTGCCGCCGCTGGCGCACAGCCTAACCATGCAGGCGCCGAAGCCCGCGCCCGCCTTGAAGCTCACCGACCTCG ACGGCAAGCCGCACGATCTGGCGAAGCTGCGCGGCAAGGTGGTGCTGGTCAATTTCTGGGCGACCTGGTGCCCGCCGTGC CGCCGCGAAATGCCGTCGATGGAGCGGCTGAAACAGGCGCTGGCCGGCGAGCCCTTCGTCGTGCTGGCGGTCGACGTCGG CGAGGACGCCGACACCATCGAGGCGTTCACCAGCCAGCTCGGGGCGGTTCCCAGCTTTCCCATCCTGCTCGACACCACCA GCCGAGCGATGCAGGCGTGGAAGGTGGCCGGCCTGCCGACCACCTACCTGGTCGACCCGCGCGGTCGCATCGTCGCCCGC GCGATCGGCGGGCGCGAGTTCGATCACCCCGACCTGGTCCGGGTGATCCGCGATCAACTTAGAAAATGA
Upstream 100 bases:
>100_bases AGCTATGGCGTGCCGCGCGGCGGCCGCTTCGACCTGCGCTTCGTCTGGCGCAGCGGCGGAAAGACGCTTTCTGGAACCCT CGAACAGGTGCAATGTGCCG
Downstream 100 bases:
>100_bases TCAGACCTTCACCCAGACCTGGCCGCCCTCGACCTTCACCTCGTAGGTCTTGATCGGCTCGTCGGCGGGCTCGCAGGTCG GCTGGCCGGTGACGAGATCG
Product: thioredoxin family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MTLRNPLAASFAVLGLTVLGLAPPATAADLPPLAHSLTMQAPKPAPALKLTDLDGKPHDLAKLRGKVVLVNFWATWCPPC RREMPSMERLKQALAGEPFVVLAVDVGEDADTIEAFTSQLGAVPSFPILLDTTSRAMQAWKVAGLPTTYLVDPRGRIVAR AIGGREFDHPDLVRVIRDQLRK
Sequences:
>Translated_182_residues MTLRNPLAASFAVLGLTVLGLAPPATAADLPPLAHSLTMQAPKPAPALKLTDLDGKPHDLAKLRGKVVLVNFWATWCPPC RREMPSMERLKQALAGEPFVVLAVDVGEDADTIEAFTSQLGAVPSFPILLDTTSRAMQAWKVAGLPTTYLVDPRGRIVAR AIGGREFDHPDLVRVIRDQLRK >Mature_181_residues TLRNPLAASFAVLGLTVLGLAPPATAADLPPLAHSLTMQAPKPAPALKLTDLDGKPHDLAKLRGKVVLVNFWATWCPPCR REMPSMERLKQALAGEPFVVLAVDVGEDADTIEAFTSQLGAVPSFPILLDTTSRAMQAWKVAGLPTTYLVDPRGRIVARA IGGREFDHPDLVRVIRDQLRK
Specific function: Thiol-disulfide oxidoreductase which is required in disulfide reduction during c-type cytochrome synthesis. May accept reducing equivalents from CcdA, leading to breakage of disulfide bonds in apocytochrome c; following this reduction heme can be covalent
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cell membrane; Single-pass type II membrane protein. Note=The thioredoxin-like motif is exposed on the outside of the membrane (By similarity) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: NA
Molecular weight: Translated: 19676; Mature: 19545
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLRNPLAASFAVLGLTVLGLAPPATAADLPPLAHSLTMQAPKPAPALKLTDLDGKPHDL CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEECCCCCCHHH AKLRGKVVLVNFWATWCPPCRREMPSMERLKQALAGEPFVVLAVDVGEDADTIEAFTSQL HHHCCCEEEEEECCHHCCHHHHCCCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHH GAVPSFPILLDTTSRAMQAWKVAGLPTTYLVDPRGRIVARAIGGREFDHPDLVRVIRDQL CCCCCCCEEECCHHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHH RK CC >Mature Secondary Structure TLRNPLAASFAVLGLTVLGLAPPATAADLPPLAHSLTMQAPKPAPALKLTDLDGKPHDL CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEECCCCCCHHH AKLRGKVVLVNFWATWCPPCRREMPSMERLKQALAGEPFVVLAVDVGEDADTIEAFTSQL HHHCCCEEEEEECCHHCCHHHHCCCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHH GAVPSFPILLDTTSRAMQAWKVAGLPTTYLVDPRGRIVARAIGGREFDHPDLVRVIRDQL CCCCCCCEEECCHHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHH RK CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA