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The map label for this gene is bedB [H]

Identifier: 74316289

GI number: 74316289

Start: 291679

End: 291987

Strand: Direct

Name: bedB [H]

Synonym: Tbd_0271

Alternate gene names: 74316289

Gene position: 291679-291987 (Clockwise)

Preceding gene: 74316288

Following gene: 74316292

Centisome position: 10.02

GC content: 62.14

Gene sequence:

>309_bases
ATGAGCGGATTCGTCGCCATCGCCGCCGCCGACGAGTTGAAGCCGGCGCAGATGAAGCGCGTCGTCGTCGACGGCAGGAA
ACTGCTGCTGTGCAATTCGAACGGCACGCATTACGTCGTCGACGAGATGTGCAGCCACGAGGACTACTCGCTGTATCTGG
GCTGCATCAAGGACGGCAAGATCAAGTGCTCGTTGCACGGCAGCTACTTCGATCTCGTCACCGGCCAGCCGACCTGCGAG
CCCGCCGACGAGCCGATCAAGACCTACGAGGTGAAGGTCGAGGGCGGCCAGGTCTGGGTGAAGGTCTGA

Upstream 100 bases:

>100_bases
TCGTATTGCACCACATCGGCCGCGCGGCAAGCGTCGCCGACGCCGCGACGCAGATCCGCGCCGTGCTCGATTCCGGCCGC
GCCGTCGTCAGGGTCAAGTG

Downstream 100 bases:

>100_bases
TCATTTTCTAAGTTGATCGCGGATCACCCGGACCAGGTCGGGGTGATCGAACTCGCGCCCGCCGATCGCGCGGGCGACGA
TGCGACCGCGCGGGTCGACC

Product: putative dioxygenase ferredoxin subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 101

Protein sequence:

>102_residues
MSGFVAIAAADELKPAQMKRVVVDGRKLLLCNSNGTHYVVDEMCSHEDYSLYLGCIKDGKIKCSLHGSYFDLVTGQPTCE
PADEPIKTYEVKVEGGQVWVKV

Sequences:

>Translated_102_residues
MSGFVAIAAADELKPAQMKRVVVDGRKLLLCNSNGTHYVVDEMCSHEDYSLYLGCIKDGKIKCSLHGSYFDLVTGQPTCE
PADEPIKTYEVKVEGGQVWVKV
>Mature_101_residues
SGFVAIAAADELKPAQMKRVVVDGRKLLLCNSNGTHYVVDEMCSHEDYSLYLGCIKDGKIKCSLHGSYFDLVTGQPTCEP
ADEPIKTYEVKVEGGQVWVKV

Specific function: This protein seems to be a 2Fe-2S ferredoxin [H]

COG id: COG2146

COG function: function code PR; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1788890, Length=76, Percent_Identity=36.8421052631579, Blast_Score=61, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: NA

Molecular weight: Translated: 11226; Mature: 11095

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGFVAIAAADELKPAQMKRVVVDGRKLLLCNSNGTHYVVDEMCSHEDYSLYLGCIKDGK
CCCEEEEEECCCCCCCCEEEEEECCCEEEEECCCCCEEEEEHHCCCCCCEEEEEEECCCE
IKCSLHGSYFDLVTGQPTCEPADEPIKTYEVKVEGGQVWVKV
EEEEECCCEEEEECCCCCCCCCCCCCEEEEEEECCCEEEEEC
>Mature Secondary Structure 
SGFVAIAAADELKPAQMKRVVVDGRKLLLCNSNGTHYVVDEMCSHEDYSLYLGCIKDGK
CCEEEEEECCCCCCCCEEEEEECCCEEEEECCCCCEEEEEHHCCCCCCEEEEEEECCCE
IKCSLHGSYFDLVTGQPTCEPADEPIKTYEVKVEGGQVWVKV
EEEEECCCEEEEECCCCCCCCCCCCCEEEEEEECCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8344526 [H]