| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is mreC [H]
Identifier: 74316279
GI number: 74316279
Start: 282327
End: 283172
Strand: Direct
Name: mreC [H]
Synonym: Tbd_0261
Alternate gene names: 74316279
Gene position: 282327-283172 (Clockwise)
Preceding gene: 74316278
Following gene: 74316280
Centisome position: 9.7
GC content: 69.74
Gene sequence:
>846_bases ATGGCGATGCCGGGCCAGCTCATGTTCGCGCGCCGGCTCGGGCCGACGGCGCGCCTGTCGATCTGGCTGCTGCTGGGTCT CGCCTGTATTGTCATCGACGTCCGCTACCATGCGCTCGAAGGCCTGCGCAGCGGATTTTCCCTGTTGCTCCAGCCCGTGC GTCAAGCCATGCGGGCACCGGTCGACGTCGCGGTCGAACTCGGCGGCTTCTTCACCCGCCACCGCCTGCTGCAGAAGGAA CGCGATGCCCTGCTCGACGAACGCGCACGCCTGCGCGTCAGCGAAAACCGGGCGAACGAACTGAGCCGTGAAAACCGCGA GCTGCGCGCGCTGCTGCAGTTGCGCAGCCGCCCGGGCCAGCAGCTGGTCCATGCGGCTCTGCTCTATCGAGGCCACGACT GGTTCGCCCAGCGCATCACGCTCGATCAGGGCGCCGACGCCGGCTTGCGTCGCGGCCTTCCGGTCGTCGACGCCGTCGGG CTGGTCGGCCAGGTCACGCGGGTCTATCCGCACTCGAGCGACGTCACGCTGGTGAGTAGCCCCGATCACCTCACGCCGGT CTACGTCGAACGCACGGGTCAGCGCGGCCTCGCCGCAGGCGGCGGCCGCGGGCGCCTCGAACTGCGCTACATGCCGGTTC ACACCGACATCCGCCCGGGCGACCGCCTGCTTACGTCCGGCATCGACCGCGTCTATCCGGCCGGCATTCCGGTGGGCCGC ATCGTCAGTGTGTCGCGGCTGAAGACGAGCCCCTATTTGAACATCGAGGGCGCACCGCTGGCCGGGCTCGATCGCTCGCG CGCGGTGCTCGTCCTCGTCGCCCGACCCCTGGAGCGTGCGCCATGA
Upstream 100 bases:
>100_bases GTGGTGCGCGGGTCGGGCCGCGCGCTCGAGGAAATGGACAAGCTCGCGTCGGTGTTCACCAACGAGTGAAGAAGCGCGCC GCTGCTGACCGGGTCGGCTG
Downstream 100 bases:
>100_bases ACGTCGCCGCCGAGACGAGCGGCCGCTGGCGCCGCATCCTGGGCAGCCTGACGCTCGCCGTGCTGGTCGAGCAGCTGCCG TGGTCGGGCCTCGCCATGGT
Product: rod shape-determining protein MreC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MAMPGQLMFARRLGPTARLSIWLLLGLACIVIDVRYHALEGLRSGFSLLLQPVRQAMRAPVDVAVELGGFFTRHRLLQKE RDALLDERARLRVSENRANELSRENRELRALLQLRSRPGQQLVHAALLYRGHDWFAQRITLDQGADAGLRRGLPVVDAVG LVGQVTRVYPHSSDVTLVSSPDHLTPVYVERTGQRGLAAGGGRGRLELRYMPVHTDIRPGDRLLTSGIDRVYPAGIPVGR IVSVSRLKTSPYLNIEGAPLAGLDRSRAVLVLVARPLERAP
Sequences:
>Translated_281_residues MAMPGQLMFARRLGPTARLSIWLLLGLACIVIDVRYHALEGLRSGFSLLLQPVRQAMRAPVDVAVELGGFFTRHRLLQKE RDALLDERARLRVSENRANELSRENRELRALLQLRSRPGQQLVHAALLYRGHDWFAQRITLDQGADAGLRRGLPVVDAVG LVGQVTRVYPHSSDVTLVSSPDHLTPVYVERTGQRGLAAGGGRGRLELRYMPVHTDIRPGDRLLTSGIDRVYPAGIPVGR IVSVSRLKTSPYLNIEGAPLAGLDRSRAVLVLVARPLERAP >Mature_280_residues AMPGQLMFARRLGPTARLSIWLLLGLACIVIDVRYHALEGLRSGFSLLLQPVRQAMRAPVDVAVELGGFFTRHRLLQKER DALLDERARLRVSENRANELSRENRELRALLQLRSRPGQQLVHAALLYRGHDWFAQRITLDQGADAGLRRGLPVVDAVGL VGQVTRVYPHSSDVTLVSSPDHLTPVYVERTGQRGLAAGGGRGRLELRYMPVHTDIRPGDRLLTSGIDRVYPAGIPVGRI VSVSRLKTSPYLNIEGAPLAGLDRSRAVLVLVARPLERAP
Specific function: Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins [H]
COG id: COG1792
COG function: function code M; Cell shape-determining protein
Gene ontology:
Cell location: Inner Membrane-Anchored [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mreC family [H]
Homologues:
Organism=Escherichia coli, GI1789648, Length=256, Percent_Identity=29.296875, Blast_Score=84, Evalue=9e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007221 - InterPro: IPR005223 [H]
Pfam domain/function: PF04085 MreC [H]
EC number: NA
Molecular weight: Translated: 31081; Mature: 30949
Theoretical pI: Translated: 11.52; Mature: 11.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMPGQLMFARRLGPTARLSIWLLLGLACIVIDVRYHALEGLRSGFSLLLQPVRQAMRAP CCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VDVAVELGGFFTRHRLLQKERDALLDERARLRVSENRANELSRENRELRALLQLRSRPGQ HHEEHHHHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHCCCHH QLVHAALLYRGHDWFAQRITLDQGADAGLRRGLPVVDAVGLVGQVTRVYPHSSDVTLVSS HHHHHHHHHCCCHHHHHEEECCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEC PDHLTPVYVERTGQRGLAAGGGRGRLELRYMPVHTDIRPGDRLLTSGIDRVYPAGIPVGR CCCCCEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHCHHHHCCCCCCHHH IVSVSRLKTSPYLNIEGAPLAGLDRSRAVLVLVARPLERAP HHHHHHHCCCCEEEECCCCCCCCCCCCEEEEEEECHHCCCC >Mature Secondary Structure AMPGQLMFARRLGPTARLSIWLLLGLACIVIDVRYHALEGLRSGFSLLLQPVRQAMRAP CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VDVAVELGGFFTRHRLLQKERDALLDERARLRVSENRANELSRENRELRALLQLRSRPGQ HHEEHHHHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHCCCHH QLVHAALLYRGHDWFAQRITLDQGADAGLRRGLPVVDAVGLVGQVTRVYPHSSDVTLVSS HHHHHHHHHCCCHHHHHEEECCCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEC PDHLTPVYVERTGQRGLAAGGGRGRLELRYMPVHTDIRPGDRLLTSGIDRVYPAGIPVGR CCCCCEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHCHHHHCCCCCCHHH IVSVSRLKTSPYLNIEGAPLAGLDRSRAVLVLVARPLERAP HHHHHHHCCCCEEEECCCCCCCCCCCCEEEEEEECHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]