| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316253
Identifier: 74316253
GI number: 74316253
Start: 259225
End: 259611
Strand: Direct
Name: 74316253
Synonym: Tbd_0235
Alternate gene names: NA
Gene position: 259225-259611 (Clockwise)
Preceding gene: 74316251
Following gene: 74316257
Centisome position: 8.91
GC content: 63.05
Gene sequence:
>387_bases ATGAAAAACCTCGAACCCAAGGAAGCCTACGCCTACCTGCAGTCCCACCCCGAGGCGGTCTTTGTCGACTGCCGCTCGGA AATCGAATACCTGTTCGTCGGCCATCCTGCCGGCGCCATCCACATTGCCTGGCAGGACAGTCCCGATTGGGATGTGAATC CCGACTTTCTGGGCCATACCCGCATCGCCGCATCGGTGAACCGGCCGGTCGTCCTGATCTGCCGCTCGGGGCGGCGTTCG GCCGACGCGGGGCGTTATCTCGAAAAACACGGCTTCCCCGAGGTCTACAACGTCGCGCACGGCTTCGAGGGCGACATGGA CGCGCATCGCCACCGCAATACGGTCAATGGCTGGCGTTTCGATGGCCTGCCGTGGGAGCAGACCTGA
Upstream 100 bases:
>100_bases GACATGGTCGTGAGGCTGGCAGGGCAATCGCGCATTATATTCGCTTGGCCTGCGGCCCTCCGACGCGCTATGGTGCAGTA TCGCGCCGCGGAATCGTCCG
Downstream 100 bases:
>100_bases GGCGCCGCGGTCACCGCGAATTCCCTCTGCTCGTTGCTCCCGTCTGCTTGCTGGTCGCCTGCGTTCGCGGCCAGCCGCCG GCGATTCAGCCCAGCGTCAC
Product: rhodanese-like protein
Products: NA
Alternate protein names: Rhodanese Domain Protein; Rhodanese-Like Protein; Rhodanese-Related Sulfurtransferase; Sulfide Dehydrogenase; Rhodanese-Like Domain Protein; Rhodanese-Related Sulfurtransferase Protein; Sulfurtransferase Protein; Rhodanese/Cdc25 Fold; Rhodanese-Like Domain-Containing Protein; Sulfate Permease Andrelated Transporter; Rhodanese-Like Sulfurtransferase
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MKNLEPKEAYAYLQSHPEAVFVDCRSEIEYLFVGHPAGAIHIAWQDSPDWDVNPDFLGHTRIAASVNRPVVLICRSGRRS ADAGRYLEKHGFPEVYNVAHGFEGDMDAHRHRNTVNGWRFDGLPWEQT
Sequences:
>Translated_128_residues MKNLEPKEAYAYLQSHPEAVFVDCRSEIEYLFVGHPAGAIHIAWQDSPDWDVNPDFLGHTRIAASVNRPVVLICRSGRRS ADAGRYLEKHGFPEVYNVAHGFEGDMDAHRHRNTVNGWRFDGLPWEQT >Mature_128_residues MKNLEPKEAYAYLQSHPEAVFVDCRSEIEYLFVGHPAGAIHIAWQDSPDWDVNPDFLGHTRIAASVNRPVVLICRSGRRS ADAGRYLEKHGFPEVYNVAHGFEGDMDAHRHRNTVNGWRFDGLPWEQT
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14616; Mature: 14616
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNLEPKEAYAYLQSHPEAVFVDCRSEIEYLFVGHPAGAIHIAWQDSPDWDVNPDFLGHT CCCCCHHHHHHHHHCCCCEEEEEECCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCE RIAASVNRPVVLICRSGRRSADAGRYLEKHGFPEVYNVAHGFEGDMDAHRHRNTVNGWRF EEEECCCCCEEEEECCCCCCCCCHHHHHHCCCCHHHHHHCCCCCCCCCHHCCCCCCCEEE DGLPWEQT CCCCCCCC >Mature Secondary Structure MKNLEPKEAYAYLQSHPEAVFVDCRSEIEYLFVGHPAGAIHIAWQDSPDWDVNPDFLGHT CCCCCHHHHHHHHHCCCCEEEEEECCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCE RIAASVNRPVVLICRSGRRSADAGRYLEKHGFPEVYNVAHGFEGDMDAHRHRNTVNGWRF EEEECCCCCEEEEECCCCCCCCCHHHHHHCCCCHHHHHHCCCCCCCCCHHCCCCCCCEEE DGLPWEQT CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA