| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316246
Identifier: 74316246
GI number: 74316246
Start: 250056
End: 250634
Strand: Direct
Name: 74316246
Synonym: Tbd_0228
Alternate gene names: NA
Gene position: 250056-250634 (Clockwise)
Preceding gene: 74316245
Following gene: 74316248
Centisome position: 8.59
GC content: 67.01
Gene sequence:
>579_bases TTGAAAAGCCAGGCGCTCACCCTGTTCGATCTGGTCGAGCGGCTCTCGCTGCTGACCCGTGCCGATCTCCGGCAGGCCGG GGCGGCACAGGGGCTGCAGCCCGTGCACCTGCAGGTGTTGTTCTATCTGAATCAGGCCAACCGTTTCAGCAACACGCCGC AAGCGCTCACCGAGTATCTCGGCCTGACCAAGGGCACTGTGTCGCAAACCCTTCTGGTACTCGCTCGGCGCCGGCTCATC TCCCGTTACGCCGATCCCCGCGACGGCCGCGTGGTCCGCCTGATCCTGACCGAGGGCGGCACGACCCTGCTGAAGACGCT CAGTGCCGGGAGCGCCTGGCGCGACATCGTCCAGACCGCAAGCCCCGCGCGCGTCAGCTCGGCGATGGTCGTGCTGCGTC AGGTGCTGTCGCAGGTGCAGGCGCAGAGCGGCAAGCGCACCTTCGGTCTATGCGGAAGCTGCCGCTACAACCGGCGGCTC GGGCCGCGCAGCTATTTTTGCGAACTGATGCAGGAAAAACTCGGCAGCCCCGAGGTGCGGCGGATCTGCCGCGAGCACGC GCCGCCGCCAGCCGATTAA
Upstream 100 bases:
>100_bases CGGCGACTGGATCGACACCAAGAGTGGCGAGCCGCTTTACGACAAGCTGGCCGCGCTCGTAGCCGCTCAAGGCGGGACCA CGATCCGCTTCTGAGGCGCC
Downstream 100 bases:
>100_bases AGTCGCCCGCGGGCGCGCGCGACCGCTGCGCGGACCTGCGCGGGCGCGGTGCCGCCGAAATGGTCGCGGGCGGCGAGCGA GCCTTCGAGGGTCAATAGTG
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; Transcriptional Regulator MarR Family; Regulatory Protein MarR
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MKSQALTLFDLVERLSLLTRADLRQAGAAQGLQPVHLQVLFYLNQANRFSNTPQALTEYLGLTKGTVSQTLLVLARRRLI SRYADPRDGRVVRLILTEGGTTLLKTLSAGSAWRDIVQTASPARVSSAMVVLRQVLSQVQAQSGKRTFGLCGSCRYNRRL GPRSYFCELMQEKLGSPEVRRICREHAPPPAD
Sequences:
>Translated_192_residues MKSQALTLFDLVERLSLLTRADLRQAGAAQGLQPVHLQVLFYLNQANRFSNTPQALTEYLGLTKGTVSQTLLVLARRRLI SRYADPRDGRVVRLILTEGGTTLLKTLSAGSAWRDIVQTASPARVSSAMVVLRQVLSQVQAQSGKRTFGLCGSCRYNRRL GPRSYFCELMQEKLGSPEVRRICREHAPPPAD >Mature_192_residues MKSQALTLFDLVERLSLLTRADLRQAGAAQGLQPVHLQVLFYLNQANRFSNTPQALTEYLGLTKGTVSQTLLVLARRRLI SRYADPRDGRVVRLILTEGGTTLLKTLSAGSAWRDIVQTASPARVSSAMVVLRQVLSQVQAQSGKRTFGLCGSCRYNRRL GPRSYFCELMQEKLGSPEVRRICREHAPPPAD
Specific function: Unknown
COG id: COG1846
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21325; Mature: 21325
Theoretical pI: Translated: 11.15; Mature: 11.15
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSQALTLFDLVERLSLLTRADLRQAGAAQGLQPVHLQVLFYLNQANRFSNTPQALTEYL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH GLTKGTVSQTLLVLARRRLISRYADPRDGRVVRLILTEGGTTLLKTLSAGSAWRDIVQTA CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHCCHHHHHHHHCC SPARVSSAMVVLRQVLSQVQAQSGKRTFGLCGSCRYNRRLGPRSYFCELMQEKLGSPEVR CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHH RICREHAPPPAD HHHHHCCCCCCC >Mature Secondary Structure MKSQALTLFDLVERLSLLTRADLRQAGAAQGLQPVHLQVLFYLNQANRFSNTPQALTEYL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH GLTKGTVSQTLLVLARRRLISRYADPRDGRVVRLILTEGGTTLLKTLSAGSAWRDIVQTA CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHCCHHHHHHHHCC SPARVSSAMVVLRQVLSQVQAQSGKRTFGLCGSCRYNRRLGPRSYFCELMQEKLGSPEVR CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHH RICREHAPPPAD HHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA