Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74316246

Identifier: 74316246

GI number: 74316246

Start: 250056

End: 250634

Strand: Direct

Name: 74316246

Synonym: Tbd_0228

Alternate gene names: NA

Gene position: 250056-250634 (Clockwise)

Preceding gene: 74316245

Following gene: 74316248

Centisome position: 8.59

GC content: 67.01

Gene sequence:

>579_bases
TTGAAAAGCCAGGCGCTCACCCTGTTCGATCTGGTCGAGCGGCTCTCGCTGCTGACCCGTGCCGATCTCCGGCAGGCCGG
GGCGGCACAGGGGCTGCAGCCCGTGCACCTGCAGGTGTTGTTCTATCTGAATCAGGCCAACCGTTTCAGCAACACGCCGC
AAGCGCTCACCGAGTATCTCGGCCTGACCAAGGGCACTGTGTCGCAAACCCTTCTGGTACTCGCTCGGCGCCGGCTCATC
TCCCGTTACGCCGATCCCCGCGACGGCCGCGTGGTCCGCCTGATCCTGACCGAGGGCGGCACGACCCTGCTGAAGACGCT
CAGTGCCGGGAGCGCCTGGCGCGACATCGTCCAGACCGCAAGCCCCGCGCGCGTCAGCTCGGCGATGGTCGTGCTGCGTC
AGGTGCTGTCGCAGGTGCAGGCGCAGAGCGGCAAGCGCACCTTCGGTCTATGCGGAAGCTGCCGCTACAACCGGCGGCTC
GGGCCGCGCAGCTATTTTTGCGAACTGATGCAGGAAAAACTCGGCAGCCCCGAGGTGCGGCGGATCTGCCGCGAGCACGC
GCCGCCGCCAGCCGATTAA

Upstream 100 bases:

>100_bases
CGGCGACTGGATCGACACCAAGAGTGGCGAGCCGCTTTACGACAAGCTGGCCGCGCTCGTAGCCGCTCAAGGCGGGACCA
CGATCCGCTTCTGAGGCGCC

Downstream 100 bases:

>100_bases
AGTCGCCCGCGGGCGCGCGCGACCGCTGCGCGGACCTGCGCGGGCGCGGTGCCGCCGAAATGGTCGCGGGCGGCGAGCGA
GCCTTCGAGGGTCAATAGTG

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator MarR Family; Regulatory Protein MarR

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MKSQALTLFDLVERLSLLTRADLRQAGAAQGLQPVHLQVLFYLNQANRFSNTPQALTEYLGLTKGTVSQTLLVLARRRLI
SRYADPRDGRVVRLILTEGGTTLLKTLSAGSAWRDIVQTASPARVSSAMVVLRQVLSQVQAQSGKRTFGLCGSCRYNRRL
GPRSYFCELMQEKLGSPEVRRICREHAPPPAD

Sequences:

>Translated_192_residues
MKSQALTLFDLVERLSLLTRADLRQAGAAQGLQPVHLQVLFYLNQANRFSNTPQALTEYLGLTKGTVSQTLLVLARRRLI
SRYADPRDGRVVRLILTEGGTTLLKTLSAGSAWRDIVQTASPARVSSAMVVLRQVLSQVQAQSGKRTFGLCGSCRYNRRL
GPRSYFCELMQEKLGSPEVRRICREHAPPPAD
>Mature_192_residues
MKSQALTLFDLVERLSLLTRADLRQAGAAQGLQPVHLQVLFYLNQANRFSNTPQALTEYLGLTKGTVSQTLLVLARRRLI
SRYADPRDGRVVRLILTEGGTTLLKTLSAGSAWRDIVQTASPARVSSAMVVLRQVLSQVQAQSGKRTFGLCGSCRYNRRL
GPRSYFCELMQEKLGSPEVRRICREHAPPPAD

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21325; Mature: 21325

Theoretical pI: Translated: 11.15; Mature: 11.15

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSQALTLFDLVERLSLLTRADLRQAGAAQGLQPVHLQVLFYLNQANRFSNTPQALTEYL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH
GLTKGTVSQTLLVLARRRLISRYADPRDGRVVRLILTEGGTTLLKTLSAGSAWRDIVQTA
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHCCHHHHHHHHCC
SPARVSSAMVVLRQVLSQVQAQSGKRTFGLCGSCRYNRRLGPRSYFCELMQEKLGSPEVR
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHH
RICREHAPPPAD
HHHHHCCCCCCC
>Mature Secondary Structure
MKSQALTLFDLVERLSLLTRADLRQAGAAQGLQPVHLQVLFYLNQANRFSNTPQALTEYL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH
GLTKGTVSQTLLVLARRRLISRYADPRDGRVVRLILTEGGTTLLKTLSAGSAWRDIVQTA
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHCCHHHHHHHHCC
SPARVSSAMVVLRQVLSQVQAQSGKRTFGLCGSCRYNRRLGPRSYFCELMQEKLGSPEVR
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHH
RICREHAPPPAD
HHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA