Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74316236

Identifier: 74316236

GI number: 74316236

Start: 238815

End: 239243

Strand: Reverse

Name: 74316236

Synonym: Tbd_0218

Alternate gene names: NA

Gene position: 239243-238815 (Counterclockwise)

Preceding gene: 74316237

Following gene: 74316233

Centisome position: 8.22

GC content: 69.0

Gene sequence:

>429_bases
ATGCCCGCTTGCCCGCTATGCGACACCCCGGGCGGGACGATCCTGTGGCAGGACGATTTCTGCCGCGTCGTCCTCGCCGA
CGAGCCGGACTATCCCGGCTTCCTCCGCGTGATCCTCGCCGCCCACGTGAAGGAAATGAGCGATCTCGCGCCAGCCGACC
AGCAGCGCCTGCTGCAGGTCGTACTCGCGACCGAAGCCGCGCTGCGCGAGGTCGTGGCGCCCCACAAGGTCAATCTCGCC
TCGCTCGGCAACCTGGTGCCGCATCTGCACTGGCATGTGATCCCGCGTTTTACCGACGACCCGCATTTCCCGAATGCGGT
GTGGGGCGTGAGGCAACGGGATACGCCGCGCGCCGCAGCGCCCGACCTGGACGCGCGGCTTGGCGCGGCGCTCAGGCGGC
GCCTTGGTCGCGCGCAGGAAACGGAATGA

Upstream 100 bases:

>100_bases
GGCGCTGGTCGGTGGCGGGCACGCCGGCGATACTCCTAAGGCTTGCCAGTCCTGTTCACGCCCCGCATGATGCGGGGCGT
TTTGTTTGTGGAGTCCCGAC

Downstream 100 bases:

>100_bases
CTTGGGCGTTCTCGGGCGCCGCGAGGACGCGCTGAGCCGGGAAGATCGCGGAGAAGGCGCTACCGCGCCCGGGTGTCGAC
TGGATGTCGAGACGCGCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: Histidine Triad Family Protein; HIT Family Hydrolase; HIT Family Protein; Diadenosine Tetraphosphate Hydrolase; Histidine Triad-Like; Histidine Triad Family Hydrolase; HIT Hydrolase; Histidine Triad Domain Protein; HIT Domain-Containing Protein; HIT Domain-Containing

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MPACPLCDTPGGTILWQDDFCRVVLADEPDYPGFLRVILAAHVKEMSDLAPADQQRLLQVVLATEAALREVVAPHKVNLA
SLGNLVPHLHWHVIPRFTDDPHFPNAVWGVRQRDTPRAAAPDLDARLGAALRRRLGRAQETE

Sequences:

>Translated_142_residues
MPACPLCDTPGGTILWQDDFCRVVLADEPDYPGFLRVILAAHVKEMSDLAPADQQRLLQVVLATEAALREVVAPHKVNLA
SLGNLVPHLHWHVIPRFTDDPHFPNAVWGVRQRDTPRAAAPDLDARLGAALRRRLGRAQETE
>Mature_141_residues
PACPLCDTPGGTILWQDDFCRVVLADEPDYPGFLRVILAAHVKEMSDLAPADQQRLLQVVLATEAALREVVAPHKVNLAS
LGNLVPHLHWHVIPRFTDDPHFPNAVWGVRQRDTPRAAAPDLDARLGAALRRRLGRAQETE

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15735; Mature: 15604

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPACPLCDTPGGTILWQDDFCRVVLADEPDYPGFLRVILAAHVKEMSDLAPADQQRLLQV
CCCCCCCCCCCCEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH
VLATEAALREVVAPHKVNLASLGNLVPHLHWHVIPRFTDDPHFPNAVWGVRQRDTPRAAA
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCHHCCCCCCCCCCCCC
PDLDARLGAALRRRLGRAQETE
CCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PACPLCDTPGGTILWQDDFCRVVLADEPDYPGFLRVILAAHVKEMSDLAPADQQRLLQV
CCCCCCCCCCCEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH
VLATEAALREVVAPHKVNLASLGNLVPHLHWHVIPRFTDDPHFPNAVWGVRQRDTPRAAA
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCHHCCCCCCCCCCCCC
PDLDARLGAALRRRLGRAQETE
CCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA