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The map label for this gene is cc4 [H]

Identifier: 74316205

GI number: 74316205

Start: 200151

End: 200777

Strand: Reverse

Name: cc4 [H]

Synonym: Tbd_0187

Alternate gene names: 74316205

Gene position: 200777-200151 (Counterclockwise)

Preceding gene: 74316210

Following gene: 74316204

Centisome position: 6.9

GC content: 66.51

Gene sequence:

>627_bases
ATGAAACTCGTCGTCTCGCTGGTCGCCGCCCTGGTCGCCTCTTCCGCTTTTGCTGCTGCACCCGCTGCCGGCCCGGCCAG
CAAGGGCGACCCCAAGGCTGCAGAAAGCATCGTCAACCAGCTTTGCGCCGGGTGCCACGCGGTCGACGGCAATAGCCCCG
CAGCGGCCAATCCGAAGCTTGCCGGTCTGAACGCCGAATACCTCAACAAGCAGCTCAACGAATTCAAATCGGGCGCGCGC
CAGAGCCCGGTCATGAGCGGCATGGTCGCCTCGCTGAGCCCACAGGACATGCTGAACCTCGCCGCCTACTACAGCGCCCA
GCAGCCCAAGCCCGCGACGGCCAAGGACAAGGAACTCGCCCTCGCCGGCCAGAAAATCTATCGCGGCGGCGTGCAAGGTG
CCGGCGTCCCGGCCTGCGCGTCATGCCATGGCCCGCAGGGCCAGGGGATCCCGGCGCAGTTCCCGCGTCTGGCCGGCCAG
CACGGCGACTACATCTACGCGCAGCTCGAAGCCTTCCGTCTCGGCAACCGCGCCAACGACGCCGCGAAGATGATGCGCAG
CATCGCGACCAAAATGACCGACGCCGACATGAAGGCCGTCGCCGCATACATCGAAGGCCTGCGCTAA

Upstream 100 bases:

>100_bases
ACGTGAAGAAGTGGGCGCGGTTGAGCACGGGCTTGGCAGTCATATTAGTTACCGCTAAACTACCCGTTTTCCCAAGTTTT
GCAAGCTTTAGGAGCTTTTG

Downstream 100 bases:

>100_bases
GGCCGGGTTGCCGCCGCCTCGTCGGCACCCCACCGCGGCTCGCGCCTTGCGGGTAAACTTATCCGGCTTGCTTAAGTCGA
TGAAAGGGTGACGCAAGTCA

Product: cytochrome c oxidase

Products: ferricytochrome c; H2O

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MKLVVSLVAALVASSAFAAAPAAGPASKGDPKAAESIVNQLCAGCHAVDGNSPAAANPKLAGLNAEYLNKQLNEFKSGAR
QSPVMSGMVASLSPQDMLNLAAYYSAQQPKPATAKDKELALAGQKIYRGGVQGAGVPACASCHGPQGQGIPAQFPRLAGQ
HGDYIYAQLEAFRLGNRANDAAKMMRSIATKMTDADMKAVAAYIEGLR

Sequences:

>Translated_208_residues
MKLVVSLVAALVASSAFAAAPAAGPASKGDPKAAESIVNQLCAGCHAVDGNSPAAANPKLAGLNAEYLNKQLNEFKSGAR
QSPVMSGMVASLSPQDMLNLAAYYSAQQPKPATAKDKELALAGQKIYRGGVQGAGVPACASCHGPQGQGIPAQFPRLAGQ
HGDYIYAQLEAFRLGNRANDAAKMMRSIATKMTDADMKAVAAYIEGLR
>Mature_208_residues
MKLVVSLVAALVASSAFAAAPAAGPASKGDPKAAESIVNQLCAGCHAVDGNSPAAANPKLAGLNAEYLNKQLNEFKSGAR
QSPVMSGMVASLSPQDMLNLAAYYSAQQPKPATAKDKELALAGQKIYRGGVQGAGVPACASCHGPQGQGIPAQFPRLAGQ
HGDYIYAQLEAFRLGNRANDAAKMMRSIATKMTDADMKAVAAYIEGLR

Specific function: Diheme, high potential cytochrome c believed to be an intermediate electron donor to terminal oxidation systems [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: 1.9.3.1

Molecular weight: Translated: 21389; Mature: 21389

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLVVSLVAALVASSAFAAAPAAGPASKGDPKAAESIVNQLCAGCHAVDGNSPAAANPKL
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
AGLNAEYLNKQLNEFKSGARQSPVMSGMVASLSPQDMLNLAAYYSAQQPKPATAKDKELA
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHH
LAGQKIYRGGVQGAGVPACASCHGPQGQGIPAQFPRLAGQHGDYIYAQLEAFRLGNRAND
HHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCHHHHHHCCCCCCEEHHHHHHHHHCCCCCH
AAKMMRSIATKMTDADMKAVAAYIEGLR
HHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKLVVSLVAALVASSAFAAAPAAGPASKGDPKAAESIVNQLCAGCHAVDGNSPAAANPKL
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
AGLNAEYLNKQLNEFKSGARQSPVMSGMVASLSPQDMLNLAAYYSAQQPKPATAKDKELA
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHH
LAGQKIYRGGVQGAGVPACASCHGPQGQGIPAQFPRLAGQHGDYIYAQLEAFRLGNRAND
HHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCHHHHHHCCCCCCEEHHHHHHHHHCCCCCH
AAKMMRSIATKMTDADMKAVAAYIEGLR
HHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ferrocytochrome c; O2

Specific reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8026750; 9032080 [H]