Click here to switch to the map view.

The map label for this gene is slyB [C]

Identifier: 74316188

GI number: 74316188

Start: 183821

End: 184285

Strand: Reverse

Name: slyB [C]

Synonym: Tbd_0170

Alternate gene names: 74316188

Gene position: 184285-183821 (Counterclockwise)

Preceding gene: 74316189

Following gene: 74316187

Centisome position: 6.33

GC content: 71.18

Gene sequence:

>465_bases
ATGTTTTCGTCGTCTCGCAAGCTGATGGTCCTGTCGCTCCTGCCGCTCGTATTGGTGCTCGGCGGATGCCCGGCGGGCAC
GGGCGGCAAGGATTACAGCCGCGGTCAGGCGCGGAACGTGCAGGAAGTGCAGATGGGCGTCGTCGAATCGGTGCGCATGG
TCTCGATCGAAGGCACGAAGTCGCCGGTCGGCGCGGGGGCCGGCGCGGTCGTCGGCGGCGTCGCCGGCAGTTCGGTCGGC
GGCGGGCGCGGCAGCGTGGTTGGTGCGACGGTCGGCGCAGTGCTCGGCGGCCTCGGCGGCGCGGCGGCCGAGGAGGCCGT
CACCCGCGACCAGGGCATCGAGATCACCGTGAAGCTCGATTCGGGACGACTGATCGCCGTCACCCAGGCCGCCGACGAGG
AATTCCGCGTCGGCGACCGCGTGCGCGTACTTTCTGGCGGCGGGGTGAGCCGCGTGTCGCACTGA

Upstream 100 bases:

>100_bases
TGTTCGAGGCCAGGCGTTGTCACCCGATCGACGCGACAGGGCAGCGCGGGCCACGCCCGGTGGGCTATACCAACACTATG
TCCGATATGAGGAGTGCGCG

Downstream 100 bases:

>100_bases
AAAAAGACCGCTGCTTTCGCCCGCGTCGCTCGACGCCCGTTCGCGTGCGCCTCCCCTGCGGCCATCGGCCTCACGCGCCG
CGCTTGCCATGACCGAGGCG

Product: outer membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MFSSSRKLMVLSLLPLVLVLGGCPAGTGGKDYSRGQARNVQEVQMGVVESVRMVSIEGTKSPVGAGAGAVVGGVAGSSVG
GGRGSVVGATVGAVLGGLGGAAAEEAVTRDQGIEITVKLDSGRLIAVTQAADEEFRVGDRVRVLSGGGVSRVSH

Sequences:

>Translated_154_residues
MFSSSRKLMVLSLLPLVLVLGGCPAGTGGKDYSRGQARNVQEVQMGVVESVRMVSIEGTKSPVGAGAGAVVGGVAGSSVG
GGRGSVVGATVGAVLGGLGGAAAEEAVTRDQGIEITVKLDSGRLIAVTQAADEEFRVGDRVRVLSGGGVSRVSH
>Mature_154_residues
MFSSSRKLMVLSLLPLVLVLGGCPAGTGGKDYSRGQARNVQEVQMGVVESVRMVSIEGTKSPVGAGAGAVVGGVAGSSVG
GGRGSVVGATVGAVLGGLGGAAAEEAVTRDQGIEITVKLDSGRLIAVTQAADEEFRVGDRVRVLSGGGVSRVSH

Specific function: Unknown

COG id: COG3133

COG function: function code M; Outer membrane lipoprotein

Gene ontology:

Cell location: Attached To The Outer Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994887, Length=153, Percent_Identity=35.9477124183007, Blast_Score=60, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15205; Mature: 15205

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSSSRKLMVLSLLPLVLVLGGCPAGTGGKDYSRGQARNVQEVQMGVVESVRMVSIEGTK
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEEEECCCC
SPVGAGAGAVVGGVAGSSVGGGRGSVVGATVGAVLGGLGGAAAEEAVTRDQGIEITVKLD
CCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEC
SGRLIAVTQAADEEFRVGDRVRVLSGGGVSRVSH
CCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCC
>Mature Secondary Structure
MFSSSRKLMVLSLLPLVLVLGGCPAGTGGKDYSRGQARNVQEVQMGVVESVRMVSIEGTK
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEEEECCCC
SPVGAGAGAVVGGVAGSSVGGGRGSVVGATVGAVLGGLGGAAAEEAVTRDQGIEITVKLD
CCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEC
SGRLIAVTQAADEEFRVGDRVRVLSGGGVSRVSH
CCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA