| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316174
Identifier: 74316174
GI number: 74316174
Start: 168142
End: 168702
Strand: Direct
Name: 74316174
Synonym: Tbd_0156
Alternate gene names: NA
Gene position: 168142-168702 (Clockwise)
Preceding gene: 74316167
Following gene: 74316175
Centisome position: 5.78
GC content: 63.64
Gene sequence:
>561_bases ATGGTTTCCCTCACTACGCCGGTATGCGATTTCGGCTGGAAAGCCCCGGATTTCAGCCTGCCCGGCGTCGACGGCATGGC GTGGACGCCGCTCGACGCGATGGGACCGAAGGGGCTGCTGGTCATGTTCATCTGCAACCACTGCCCCTACGTCAAGGCGA TCCGCCCGCGGCTCGTGCGCGATCTCGCCGAACTCAAGCGCGACCACGGTATTCATGCGATCGCGATCATGTCGAACGAC CCGGCCGAATATCCCGAGGATTCGTTCGAGAACATGAAGCAGGTCGCGCGCGACTTCGATTTCCCGTTTCCTTACGTCAT CGACGAGACGCAGCAGGTGGCGAAGGCTTACGGTGCCGTGTGCACGCCCGACTTCTTCGGGTTCAACCGCAGCTTCGAGC TGCAGTACCGCGGTCGCTTCGACGCGTCGCGCAAGGAGACGGCGCCCGAAGACGCGCGCCGCGACCTGTTTGAGGCGATG AAGGAGGTCGCGGCCACCCAGCGCGGGCCGGCCGAACAGATTCCGAGCATGGGCTGCTCGATCAAATGGAAGGAGGCCTG A
Upstream 100 bases:
>100_bases CCGAAGCGGGCGCCGAGGCTCAGCGTCTGGTCGAGGAAGAAGCGCGGGGAGGACATCTTGCTATTATGCCGGGGTTGTCC CGTAACTCTGTGGAGCGCTC
Downstream 100 bases:
>100_bases CATGGTCGTCAGTCGGGGGCACTGGGAGGGGGTCTACCGCGACAAGGCGGCGGACCAGGTGAGCTGGTTCCAGCCGAGCG CCACGTCGTCTTACCGGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: Redoxin Domain Protein; Thioredoxin Family Protein; Redoxin; Redoxin Superfamily; Thiol-Disulfide Isomerase/Thioredoxin; Thioredoxin; Peroxiredoxin; Thiol-Disulfide Isomerase Or Thioredoxin; Antioxidant AhpC/TSA Family; Alkyl Hydroperoxide Reductase; Thiol-Disulfide Isomerase; Thioredoxin Domain-Containing Protein; Anti-Oxidant AhpCTSA Family Protein; Thiol-Disulfide Isomerase Thioredoxin Family; Peroxiredoxin-Like Protein; Thiol-Disulfide Isomerase And Thioredoxin; AhpC/TSA Family Protein; Thiol-Disulfide Isomerase-Like Protein; Thiol-Disulfide Isomerase And Thioredoxins
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MVSLTTPVCDFGWKAPDFSLPGVDGMAWTPLDAMGPKGLLVMFICNHCPYVKAIRPRLVRDLAELKRDHGIHAIAIMSND PAEYPEDSFENMKQVARDFDFPFPYVIDETQQVAKAYGAVCTPDFFGFNRSFELQYRGRFDASRKETAPEDARRDLFEAM KEVAATQRGPAEQIPSMGCSIKWKEA
Sequences:
>Translated_186_residues MVSLTTPVCDFGWKAPDFSLPGVDGMAWTPLDAMGPKGLLVMFICNHCPYVKAIRPRLVRDLAELKRDHGIHAIAIMSND PAEYPEDSFENMKQVARDFDFPFPYVIDETQQVAKAYGAVCTPDFFGFNRSFELQYRGRFDASRKETAPEDARRDLFEAM KEVAATQRGPAEQIPSMGCSIKWKEA >Mature_186_residues MVSLTTPVCDFGWKAPDFSLPGVDGMAWTPLDAMGPKGLLVMFICNHCPYVKAIRPRLVRDLAELKRDHGIHAIAIMSND PAEYPEDSFENMKQVARDFDFPFPYVIDETQQVAKAYGAVCTPDFFGFNRSFELQYRGRFDASRKETAPEDARRDLFEAM KEVAATQRGPAEQIPSMGCSIKWKEA
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20977; Mature: 20977
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSLTTPVCDFGWKAPDFSLPGVDGMAWTPLDAMGPKGLLVMFICNHCPYVKAIRPRLVR CCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCEEEHHHHCCCCHHHHHHHHHHH DLAELKRDHGIHAIAIMSNDPAEYPEDSFENMKQVARDFDFPFPYVIDETQQVAKAYGAV HHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC CTPDFFGFNRSFELQYRGRFDASRKETAPEDARRDLFEAMKEVAATQRGPAEQIPSMGCS CCCHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCC IKWKEA EEECCC >Mature Secondary Structure MVSLTTPVCDFGWKAPDFSLPGVDGMAWTPLDAMGPKGLLVMFICNHCPYVKAIRPRLVR CCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCEEEHHHHCCCCHHHHHHHHHHH DLAELKRDHGIHAIAIMSNDPAEYPEDSFENMKQVARDFDFPFPYVIDETQQVAKAYGAV HHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC CTPDFFGFNRSFELQYRGRFDASRKETAPEDARRDLFEAMKEVAATQRGPAEQIPSMGCS CCCHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCC IKWKEA EEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA