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The map label for this gene is ybiT [H]

Identifier: 74316169

GI number: 74316169

Start: 160519

End: 162111

Strand: Reverse

Name: ybiT [H]

Synonym: Tbd_0151

Alternate gene names: 74316169

Gene position: 162111-160519 (Counterclockwise)

Preceding gene: 74316170

Following gene: 74316168

Centisome position: 5.57

GC content: 63.15

Gene sequence:

>1593_bases
GTGCTCACCGCATCCAGCATCACCCTTCAATTCGCTTCCAAACCGCTGTTCGAGAACGTCAACGTCAAGTTCGGCGACGG
CAACCGCTACGGCCTGATCGGCGCGAACGGCAGCGGCAAGTCGACCTTCATGAAAATCCTTGCCGGCGAGCTCGAGCCGA
CCGCGGGCAATGTGTCGCTCGACCCCGGCGAACGCATGGCCTGGCTGCGCCAGGACCAGTTCGGCTACGAGGACCAGCGC
GTGCTCGACGTCGTGATGCAGGGCCACGTCGAAATGTGGCGCGTGATGCAGGAGAAGGACGCGATCTACATGAACCCCGA
GGCGAGCGAAGAGGACTATCTGCGCGCCGCCGAACTTGAAGGCAAGTTCGGCGAACTCGGCGGCTACGACGCCGAAGCGC
GGGCCGGTGAGCTGCTGCTCGGCGTCGGCATTCCGACCGAACAGCACCAGGGCACGATGAGCCAGATCGCGCCCGGCTTC
AAGCTGCGCGTGCTGCTGGCGCAGGCGCTCTTCTCCAAGCCCGACATCCTGCTGCTCGACGAACCGACCAACAACCTCGA
CATCAACACGATCCGCTGGCTTGAGCAGGTGCTGAACGAGAGCAACGCGACGATCGTCGTGATCTCGCACGACCGCCATT
TCCTGAACCAGGTCTGCACCCACATGGCCGACCTCGACTACGGCACGATCAAGGTGTGGCCGGGCAACTACGACGACTAC
ATGCTCGCGTCCTCCGAGGCCAAGGCGCGCCAAGCCGCGGCCAACGCGCGCGCGAAGGACAAGGTCGCCGAACTGCAGGA
ATTCGTGCGCCGCTTCTCGGCCAACAAGTCGAAGGCGCGCCAGGCGACGAGCCGCATGAAGATGATCGACAAGATCAAGA
TCGAGGACTTCAAGCCGAGTTCGCGCCAGAACCCCTACATCCGCTTCGAGCCGGAGAAGGCGCTGCACCGTCGCGCGCTC
GAGGTCGAAAATCTGAAATTCGGCTATGACGCCGAGCCCCTGTTCACGAATCTCGGCTTCTCGCTCGAAGCCGGCGAGAA
GCTCGCCGTCATCGGCGGCAACGGCGTCGGCAAGTCGACGCTCATGAAGCTCCTGATGGGCGAACTCACGCCCGCCTACG
GCGAGATCCGCTGGAGCGAAAACGCCAACGTCGGCTACTTCTCGCAGGACCACGTCGCCGATTTCGACATGGACCTCAAC
CTCACCGACTGGATGCACCAGTGGACGCAAGCGGGCGACGACGAGCAGGTGCTCCGCGGCATCCTCGGCCGCCTGCTGTT
CTCGGGTGACGACGTCAAGAAGTCGGTGCGCGTGCTCTCGGGCGGCGAGAAGGGCCGCATGCTCTACGGCAAGCTGATGC
TCGGGCGCCACAACGTGCTCGTGATGGACGAGCCGACCAACCACATGGACATGGAGTCGATCGAGTCGCTGAACCTCGCG
CTCGAACTCTTCAAGGGCACGCTGATCTTCGTTTCGCACGACCGCCAGTTCGTCTCGAGCCTCGCCACGCGCATCCTCGA
GATCACGCCGCAAGGCGTCGAGTTCTACATGGGCAACTACGATGAGTACCTGCATTCGAAGGGTCTGGAATAA

Upstream 100 bases:

>100_bases
GCCTGCAGCGCCTGACGCGAAAGCGGGCGCAGCCCCGCGGGACGCCGCGCCCGGGTGTTAAAATTCGCGGCTTTCCCGCG
TTGCATCCCAGGATTCCGCC

Downstream 100 bases:

>100_bases
GTCCTCGTACCCGCGCGAGACCAAGCGGGCGCACCGATTCGTTGCCGTTTTGACCTGGAGTCATCAGCACGAGTGAAGTC
GTCGTCATCGGTCTTGGCCA

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 530; Mature: 530

Protein sequence:

>530_residues
MLTASSITLQFASKPLFENVNVKFGDGNRYGLIGANGSGKSTFMKILAGELEPTAGNVSLDPGERMAWLRQDQFGYEDQR
VLDVVMQGHVEMWRVMQEKDAIYMNPEASEEDYLRAAELEGKFGELGGYDAEARAGELLLGVGIPTEQHQGTMSQIAPGF
KLRVLLAQALFSKPDILLLDEPTNNLDINTIRWLEQVLNESNATIVVISHDRHFLNQVCTHMADLDYGTIKVWPGNYDDY
MLASSEAKARQAAANARAKDKVAELQEFVRRFSANKSKARQATSRMKMIDKIKIEDFKPSSRQNPYIRFEPEKALHRRAL
EVENLKFGYDAEPLFTNLGFSLEAGEKLAVIGGNGVGKSTLMKLLMGELTPAYGEIRWSENANVGYFSQDHVADFDMDLN
LTDWMHQWTQAGDDEQVLRGILGRLLFSGDDVKKSVRVLSGGEKGRMLYGKLMLGRHNVLVMDEPTNHMDMESIESLNLA
LELFKGTLIFVSHDRQFVSSLATRILEITPQGVEFYMGNYDEYLHSKGLE

Sequences:

>Translated_530_residues
MLTASSITLQFASKPLFENVNVKFGDGNRYGLIGANGSGKSTFMKILAGELEPTAGNVSLDPGERMAWLRQDQFGYEDQR
VLDVVMQGHVEMWRVMQEKDAIYMNPEASEEDYLRAAELEGKFGELGGYDAEARAGELLLGVGIPTEQHQGTMSQIAPGF
KLRVLLAQALFSKPDILLLDEPTNNLDINTIRWLEQVLNESNATIVVISHDRHFLNQVCTHMADLDYGTIKVWPGNYDDY
MLASSEAKARQAAANARAKDKVAELQEFVRRFSANKSKARQATSRMKMIDKIKIEDFKPSSRQNPYIRFEPEKALHRRAL
EVENLKFGYDAEPLFTNLGFSLEAGEKLAVIGGNGVGKSTLMKLLMGELTPAYGEIRWSENANVGYFSQDHVADFDMDLN
LTDWMHQWTQAGDDEQVLRGILGRLLFSGDDVKKSVRVLSGGEKGRMLYGKLMLGRHNVLVMDEPTNHMDMESIESLNLA
LELFKGTLIFVSHDRQFVSSLATRILEITPQGVEFYMGNYDEYLHSKGLE
>Mature_530_residues
MLTASSITLQFASKPLFENVNVKFGDGNRYGLIGANGSGKSTFMKILAGELEPTAGNVSLDPGERMAWLRQDQFGYEDQR
VLDVVMQGHVEMWRVMQEKDAIYMNPEASEEDYLRAAELEGKFGELGGYDAEARAGELLLGVGIPTEQHQGTMSQIAPGF
KLRVLLAQALFSKPDILLLDEPTNNLDINTIRWLEQVLNESNATIVVISHDRHFLNQVCTHMADLDYGTIKVWPGNYDDY
MLASSEAKARQAAANARAKDKVAELQEFVRRFSANKSKARQATSRMKMIDKIKIEDFKPSSRQNPYIRFEPEKALHRRAL
EVENLKFGYDAEPLFTNLGFSLEAGEKLAVIGGNGVGKSTLMKLLMGELTPAYGEIRWSENANVGYFSQDHVADFDMDLN
LTDWMHQWTQAGDDEQVLRGILGRLLFSGDDVKKSVRVLSGGEKGRMLYGKLMLGRHNVLVMDEPTNHMDMESIESLNLA
LELFKGTLIFVSHDRQFVSSLATRILEITPQGVEFYMGNYDEYLHSKGLE

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=526, Percent_Identity=31.9391634980989, Blast_Score=273, Evalue=4e-73,
Organism=Homo sapiens, GI10947137, Length=530, Percent_Identity=31.6981132075472, Blast_Score=251, Evalue=1e-66,
Organism=Homo sapiens, GI27881506, Length=530, Percent_Identity=31.6981132075472, Blast_Score=251, Evalue=1e-66,
Organism=Homo sapiens, GI10947135, Length=540, Percent_Identity=28.7037037037037, Blast_Score=203, Evalue=3e-52,
Organism=Homo sapiens, GI69354671, Length=540, Percent_Identity=28.7037037037037, Blast_Score=203, Evalue=3e-52,
Organism=Escherichia coli, GI1787041, Length=530, Percent_Identity=69.0566037735849, Blast_Score=776, Evalue=0.0,
Organism=Escherichia coli, GI1789751, Length=525, Percent_Identity=32.5714285714286, Blast_Score=293, Evalue=2e-80,
Organism=Escherichia coli, GI2367384, Length=521, Percent_Identity=31.0940499040307, Blast_Score=249, Evalue=4e-67,
Organism=Escherichia coli, GI1787182, Length=521, Percent_Identity=32.6295585412668, Blast_Score=243, Evalue=2e-65,
Organism=Escherichia coli, GI1788165, Length=210, Percent_Identity=27.1428571428571, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1789891, Length=229, Percent_Identity=26.2008733624454, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1786398, Length=216, Percent_Identity=26.8518518518519, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1787758, Length=257, Percent_Identity=26.4591439688716, Blast_Score=70, Evalue=5e-13,
Organism=Escherichia coli, GI87081782, Length=216, Percent_Identity=30.0925925925926, Blast_Score=70, Evalue=5e-13,
Organism=Escherichia coli, GI1787029, Length=238, Percent_Identity=27.3109243697479, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI87081834, Length=200, Percent_Identity=28, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1789864, Length=243, Percent_Identity=24.6913580246914, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1788450, Length=244, Percent_Identity=26.2295081967213, Blast_Score=64, Evalue=4e-11,
Organism=Escherichia coli, GI87081791, Length=216, Percent_Identity=24.537037037037, Blast_Score=62, Evalue=9e-11,
Organism=Escherichia coli, GI48994997, Length=238, Percent_Identity=28.9915966386555, Blast_Score=62, Evalue=1e-10,
Organism=Caenorhabditis elegans, GI17553372, Length=530, Percent_Identity=31.8867924528302, Blast_Score=257, Evalue=1e-68,
Organism=Caenorhabditis elegans, GI17555318, Length=519, Percent_Identity=28.9017341040462, Blast_Score=236, Evalue=2e-62,
Organism=Caenorhabditis elegans, GI17559834, Length=532, Percent_Identity=27.8195488721804, Blast_Score=224, Evalue=8e-59,
Organism=Saccharomyces cerevisiae, GI6320874, Length=531, Percent_Identity=30.6967984934087, Blast_Score=258, Evalue=1e-69,
Organism=Saccharomyces cerevisiae, GI6321121, Length=542, Percent_Identity=30.2583025830258, Blast_Score=242, Evalue=1e-64,
Organism=Saccharomyces cerevisiae, GI6323278, Length=425, Percent_Identity=26.1176470588235, Blast_Score=142, Evalue=1e-34,
Organism=Saccharomyces cerevisiae, GI6324314, Length=426, Percent_Identity=27.2300469483568, Blast_Score=140, Evalue=5e-34,
Organism=Saccharomyces cerevisiae, GI6325030, Length=428, Percent_Identity=26.6355140186916, Blast_Score=138, Evalue=2e-33,
Organism=Drosophila melanogaster, GI24666836, Length=522, Percent_Identity=31.6091954022989, Blast_Score=277, Evalue=2e-74,
Organism=Drosophila melanogaster, GI24642252, Length=536, Percent_Identity=29.1044776119403, Blast_Score=246, Evalue=3e-65,
Organism=Drosophila melanogaster, GI18859989, Length=536, Percent_Identity=29.1044776119403, Blast_Score=246, Evalue=3e-65,
Organism=Drosophila melanogaster, GI24641342, Length=532, Percent_Identity=29.3233082706767, Blast_Score=239, Evalue=2e-63,
Organism=Drosophila melanogaster, GI221500365, Length=199, Percent_Identity=30.6532663316583, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI116007184, Length=199, Percent_Identity=30.6532663316583, Blast_Score=70, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 59502; Mature: 59502

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTASSITLQFASKPLFENVNVKFGDGNRYGLIGANGSGKSTFMKILAGELEPTAGNVSL
CCCCCEEEEEECCCCCCCCCEEEECCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCEEE
DPGERMAWLRQDQFGYEDQRVLDVVMQGHVEMWRVMQEKDAIYMNPEASEEDYLRAAELE
CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHCC
GKFGELGGYDAEARAGELLLGVGIPTEQHQGTMSQIAPGFKLRVLLAQALFSKPDILLLD
CCCCCCCCCCCCCCCCCEEEEECCCCHHCCCCHHHHCCCHHHHHHHHHHHHCCCCEEEEE
EPTNNLDINTIRWLEQVLNESNATIVVISHDRHFLNQVCTHMADLDYGTIKVWPGNYDDY
CCCCCCCCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCCCC
MLASSEAKARQAAANARAKDKVAELQEFVRRFSANKSKARQATSRMKMIDKIKIEDFKPS
EEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEECCCCCC
SRQNPYIRFEPEKALHRRALEVENLKFGYDAEPLFTNLGFSLEAGEKLAVIGGNGVGKST
CCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCHHHHHCCCEECCCCEEEEEECCCCCHHH
LMKLLMGELTPAYGEIRWSENANVGYFSQDHVADFDMDLNLTDWMHQWTQAGDDEQVLRG
HHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHH
ILGRLLFSGDDVKKSVRVLSGGEKGRMLYGKLMLGRHNVLVMDEPTNHMDMESIESLNLA
HHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHH
LELFKGTLIFVSHDRQFVSSLATRILEITPQGVEFYMGNYDEYLHSKGLE
HHHHCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHCCCC
>Mature Secondary Structure
MLTASSITLQFASKPLFENVNVKFGDGNRYGLIGANGSGKSTFMKILAGELEPTAGNVSL
CCCCCEEEEEECCCCCCCCCEEEECCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCEEE
DPGERMAWLRQDQFGYEDQRVLDVVMQGHVEMWRVMQEKDAIYMNPEASEEDYLRAAELE
CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHCC
GKFGELGGYDAEARAGELLLGVGIPTEQHQGTMSQIAPGFKLRVLLAQALFSKPDILLLD
CCCCCCCCCCCCCCCCCEEEEECCCCHHCCCCHHHHCCCHHHHHHHHHHHHCCCCEEEEE
EPTNNLDINTIRWLEQVLNESNATIVVISHDRHFLNQVCTHMADLDYGTIKVWPGNYDDY
CCCCCCCCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCCCC
MLASSEAKARQAAANARAKDKVAELQEFVRRFSANKSKARQATSRMKMIDKIKIEDFKPS
EEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEECCCCCC
SRQNPYIRFEPEKALHRRALEVENLKFGYDAEPLFTNLGFSLEAGEKLAVIGGNGVGKST
CCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCHHHHHCCCEECCCCEEEEEECCCCCHHH
LMKLLMGELTPAYGEIRWSENANVGYFSQDHVADFDMDLNLTDWMHQWTQAGDDEQVLRG
HHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHH
ILGRLLFSGDDVKKSVRVLSGGEKGRMLYGKLMLGRHNVLVMDEPTNHMDMESIESLNLA
HHHHHHCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHH
LELFKGTLIFVSHDRQFVSSLATRILEITPQGVEFYMGNYDEYLHSKGLE
HHHHCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]