| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316050
Identifier: 74316050
GI number: 74316050
Start: 31407
End: 32003
Strand: Reverse
Name: 74316050
Synonym: Tbd_0032
Alternate gene names: NA
Gene position: 32003-31407 (Counterclockwise)
Preceding gene: 74316051
Following gene: 74316049
Centisome position: 1.1
GC content: 67.0
Gene sequence:
>597_bases GTGAGCGACAAACCTTTTGCAGAATCCTGCGTGCAGAACCGCGCACCGATCCTCGCGGTCCTGCGCGAGTGGTTCGCCGA CCGCCGGCGCGTGCTCGAGGTCGGCAGCGGCACCGGGCAGCACGCGGTCTATTTCGCCCCCGAACTGCCGCATCTGAGCT GGCAGACAGCCGACGTCGTCGCGCATCACGCGGGTATTCGCCAATGGCTGGCCGACGCCGCGGCGCCCAATGCGCTGCCG CCGATCGCGCTCGACGTCAACGACGATTCCTGGCATCGCGCGCGCTACGACGCGGTGTTCTCGGCCAATACGCTGCACAT CATGAGTTGGCCCGAGGTCGAAAAATTTTTCGTCGGCGTCGGCGCGGTGCTCGAGCCGGGCGGCGTGCTCGCGGTCTACG GTCCTTTCAACTACGGCGGCACTTACACGTCCGAGAGCAACGCGCGTTTCGACGCTTGGCTGAAGGCGCGCGACCCCGCG TCCGGCGTGCGCGACTTCGAGGCCATCGATGCCTTGGCGCGTGCGCAGGGACTGCGTCTCGAACGTGACGTGGCGATGCC GGCGAACAATCGCACCCTGGTCTGGCGCGCGAAATGA
Upstream 100 bases:
>100_bases CGCACAAACCGGTCCATGCCGTGCTGCTGCTCGCCGACGGCCGCCTGGTCGAGGTCGACACCGACGTCGCCAACCCGCTT TCCTTCCTGGAGCCACGCCC
Downstream 100 bases:
>100_bases TTCCCGCTTTGTGTTGGGAATCGCTCTGCTATAACACAACCATCGTGACGCAAGGTAGAGCCCCATGCGCATCGCCGAAC TCATCCAACGCTGGAGCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MSDKPFAESCVQNRAPILAVLREWFADRRRVLEVGSGTGQHAVYFAPELPHLSWQTADVVAHHAGIRQWLADAAAPNALP PIALDVNDDSWHRARYDAVFSANTLHIMSWPEVEKFFVGVGAVLEPGGVLAVYGPFNYGGTYTSESNARFDAWLKARDPA SGVRDFEAIDALARAQGLRLERDVAMPANNRTLVWRAK
Sequences:
>Translated_198_residues MSDKPFAESCVQNRAPILAVLREWFADRRRVLEVGSGTGQHAVYFAPELPHLSWQTADVVAHHAGIRQWLADAAAPNALP PIALDVNDDSWHRARYDAVFSANTLHIMSWPEVEKFFVGVGAVLEPGGVLAVYGPFNYGGTYTSESNARFDAWLKARDPA SGVRDFEAIDALARAQGLRLERDVAMPANNRTLVWRAK >Mature_197_residues SDKPFAESCVQNRAPILAVLREWFADRRRVLEVGSGTGQHAVYFAPELPHLSWQTADVVAHHAGIRQWLADAAAPNALPP IALDVNDDSWHRARYDAVFSANTLHIMSWPEVEKFFVGVGAVLEPGGVLAVYGPFNYGGTYTSESNARFDAWLKARDPAS GVRDFEAIDALARAQGLRLERDVAMPANNRTLVWRAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI93102387, Length=194, Percent_Identity=37.1134020618557, Blast_Score=112, Evalue=3e-25, Organism=Caenorhabditis elegans, GI71998087, Length=205, Percent_Identity=33.1707317073171, Blast_Score=107, Evalue=6e-24, Organism=Drosophila melanogaster, GI28574095, Length=173, Percent_Identity=36.4161849710983, Blast_Score=117, Evalue=3e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21883; Mature: 21752
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKPFAESCVQNRAPILAVLREWFADRRRVLEVGSGTGQHAVYFAPELPHLSWQTADVV CCCCCHHHHHHHCCCHHHHHHHHHHHHHHHEECCCCCCCCEEEEECCCCCCCCCCHHHHH AHHAGIRQWLADAAAPNALPPIALDVNDDSWHRARYDAVFSANTLHIMSWPEVEKFFVGV HHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHEEECCCEEEEEECCCHHHHHHHH GAVLEPGGVLAVYGPFNYGGTYTSESNARFDAWLKARDPASGVRDFEAIDALARAQGLRL CCEECCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCE ERDVAMPANNRTLVWRAK ECCCCCCCCCCEEEEEEC >Mature Secondary Structure SDKPFAESCVQNRAPILAVLREWFADRRRVLEVGSGTGQHAVYFAPELPHLSWQTADVV CCCCHHHHHHHCCCHHHHHHHHHHHHHHHEECCCCCCCCEEEEECCCCCCCCCCHHHHH AHHAGIRQWLADAAAPNALPPIALDVNDDSWHRARYDAVFSANTLHIMSWPEVEKFFVGV HHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHEEECCCEEEEEECCCHHHHHHHH GAVLEPGGVLAVYGPFNYGGTYTSESNARFDAWLKARDPASGVRDFEAIDALARAQGLRL CCEECCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCE ERDVAMPANNRTLVWRAK ECCCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA