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The map label for this gene is fliR [H]

Identifier: 73539699

GI number: 73539699

Start: 2721246

End: 2722031

Strand: Reverse

Name: fliR [H]

Synonym: Reut_B5879

Alternate gene names: 73539699

Gene position: 2722031-2721246 (Counterclockwise)

Preceding gene: 73539700

Following gene: 73539694

Centisome position: 99.85

GC content: 65.01

Gene sequence:

>786_bases
GTGATCGAAGTCACCAACGCGCAGCTCTATGGCTGGATCGCGACCTTCCTGTGGCCGTTCTTCCGGCTGCTCGCGCTGAT
CGGCACGGCGCCGCTGTTCGGTGAATCCACCATCCCTGGCCGCGTCAAGGTGGGCCTGGCCGCGCTCACCGCGATGGTGG
TTTCTCCCACGCTTGGCAACCTGCCCGTGGTGCCGGTCTACTCGTGGCAAGGCCTGATCATCATCCTCAACGAGGTTGGC
ATCGGACTGGCTACCGGCTTCACCATGCGGCTGGTATTTGCGATCGTGCAGCAGGCCGGCGAAATCATCGGCATGCAGAT
GGGCCTGGGCTTCGCCTCGTTCTTCGACCGCGCCGCCGGCGGCCAGACCATGGTGCTGGCGCGCTTCCTCAATATCATCG
CCGTGCTGCTGTTCCTGGCCATGGATGGCCACCTGCTGATGCTTGGCGCGCTCGTCGACAGCTTCCAGGGATTGCCTATC
GGCGCCACGCCGGTGTCGGGCGAAGGCTGGCACGCCGTAGCGCGTGCAGGCGGCATGGTGTTCTCGTCGGGGCTGCTGCT
CGCGCTACCGATGATTGCCGCGCTGCTGACGCTGAACCTTGCCATGGGCATTCTGAACCGCGCGTCGCCGCAGCTGTCGA
TTTTCGCGGTCGGCTTCCCGGTCACGCTATCGGGCGGTCTGCTCGTGCTGGCGCTGGTGATGCCGCAGATGGGCAGCTAC
ATGCAGCACATGATCGAAGCGGGACTGGACGCGGTGAACACGGTGCTGAGCCAGTTCGCGCGCTAA

Upstream 100 bases:

>100_bases
GTGGATGATCAACACCATGGTGGACTACATGCGTGAAGTCCTCCAGAGCATTCCTGCGATGGCGCACTGACGCTGTCCTC
GTCGCAATCCGCATACTGCC

Downstream 100 bases:

>100_bases
TGCGCGCGTGGCGAACCGTCCCGCCGGACATGGCGGGACGCGATCTCCTCACAGGGACCGATTCGTTCGCCACCCACTCA
ATGCGCCAGCAGTTTCGCAG

Product: flagellar biosynthesis protein FliR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MIEVTNAQLYGWIATFLWPFFRLLALIGTAPLFGESTIPGRVKVGLAALTAMVVSPTLGNLPVVPVYSWQGLIIILNEVG
IGLATGFTMRLVFAIVQQAGEIIGMQMGLGFASFFDRAAGGQTMVLARFLNIIAVLLFLAMDGHLLMLGALVDSFQGLPI
GATPVSGEGWHAVARAGGMVFSSGLLLALPMIAALLTLNLAMGILNRASPQLSIFAVGFPVTLSGGLLVLALVMPQMGSY
MQHMIEAGLDAVNTVLSQFAR

Sequences:

>Translated_261_residues
MIEVTNAQLYGWIATFLWPFFRLLALIGTAPLFGESTIPGRVKVGLAALTAMVVSPTLGNLPVVPVYSWQGLIIILNEVG
IGLATGFTMRLVFAIVQQAGEIIGMQMGLGFASFFDRAAGGQTMVLARFLNIIAVLLFLAMDGHLLMLGALVDSFQGLPI
GATPVSGEGWHAVARAGGMVFSSGLLLALPMIAALLTLNLAMGILNRASPQLSIFAVGFPVTLSGGLLVLALVMPQMGSY
MQHMIEAGLDAVNTVLSQFAR
>Mature_261_residues
MIEVTNAQLYGWIATFLWPFFRLLALIGTAPLFGESTIPGRVKVGLAALTAMVVSPTLGNLPVVPVYSWQGLIIILNEVG
IGLATGFTMRLVFAIVQQAGEIIGMQMGLGFASFFDRAAGGQTMVLARFLNIIAVLLFLAMDGHLLMLGALVDSFQGLPI
GATPVSGEGWHAVARAGGMVFSSGLLLALPMIAALLTLNLAMGILNRASPQLSIFAVGFPVTLSGGLLVLALVMPQMGSY
MQHMIEAGLDAVNTVLSQFAR

Specific function: Role in flagellar biosynthesis [H]

COG id: COG1684

COG function: function code NU; Flagellar biosynthesis pathway, component FliR

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliR/mopE/spaR family [H]

Homologues:

Organism=Escherichia coli, GI1788261, Length=259, Percent_Identity=44.7876447876448, Blast_Score=197, Evalue=6e-52,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006303
- InterPro:   IPR002010 [H]

Pfam domain/function: PF01311 Bac_export_1 [H]

EC number: NA

Molecular weight: Translated: 27461; Mature: 27461

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEVTNAQLYGWIATFLWPFFRLLALIGTAPLFGESTIPGRVKVGLAALTAMVVSPTLGN
CEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
LPVVPVYSWQGLIIILNEVGIGLATGFTMRLVFAIVQQAGEIIGMQMGLGFASFFDRAAG
CCEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC
GQTMVLARFLNIIAVLLFLAMDGHLLMLGALVDSFQGLPIGATPVSGEGWHAVARAGGMV
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCHH
FSSGLLLALPMIAALLTLNLAMGILNRASPQLSIFAVGFPVTLSGGLLVLALVMPQMGSY
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHCCHHHHHHHHHHHHHHH
MQHMIEAGLDAVNTVLSQFAR
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIEVTNAQLYGWIATFLWPFFRLLALIGTAPLFGESTIPGRVKVGLAALTAMVVSPTLGN
CEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
LPVVPVYSWQGLIIILNEVGIGLATGFTMRLVFAIVQQAGEIIGMQMGLGFASFFDRAAG
CCEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC
GQTMVLARFLNIIAVLLFLAMDGHLLMLGALVDSFQGLPIGATPVSGEGWHAVARAGGMV
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCHH
FSSGLLLALPMIAALLTLNLAMGILNRASPQLSIFAVGFPVTLSGGLLVLALVMPQMGSY
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHCCHHHHHHHHHHHHHHH
MQHMIEAGLDAVNTVLSQFAR
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8412685; 7934865 [H]