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The map label for this gene is arcB [H]

Identifier: 73539580

GI number: 73539580

Start: 2581042

End: 2581986

Strand: Reverse

Name: arcB [H]

Synonym: Reut_B5760

Alternate gene names: 73539580

Gene position: 2581986-2581042 (Counterclockwise)

Preceding gene: 73539581

Following gene: 73539579

Centisome position: 94.71

GC content: 65.82

Gene sequence:

>945_bases
ATGCTGAACATCGATGCGCCCACCACGCGGGCGTCCCTGCCATTCGACCGCCTTGTCGCAGCCCTGAAGGACGCGTTCGC
ATCGGGTTGCGAGGTGCCGCTTCGGCACAGCCATACGGTCACGGCCGCGCCGGGCGAGCCAGGCACGCTTTTGCTGATGC
CTGCGTGGAATGCGGCAAGCGGGTACATGGGCGTCAAGACCGTGTGCGTTTATCCCGGCAACCACGGTCGCAAACTACCG
GGGCTCTATTCGACCTACATCCTGTACCGTGCGGAGACAGGCAAGCCGCTGGCGTTGATCGACGGCAATGAGATTACCTC
CCGACGGACGGCCGCGGCGTCGGCCCTCGCGGCGTCCTTCCTGTGCCGCGCGGATGCGAGTTCCATGCTGGTGCTTGGCG
CCGGCCGCGTGGCCGGTCTGCTTCCTTATGCCTATCGCACCGTGCGCCAAATCCGGCGCGTCGCGGTGTGGGATATCGAC
ACGGACCAGGCCCATCGGCTCGTTGCCCGCCTGTGCGCCGACGGCTTTGATGCCGATGTGGTCGACCGGCTCGATATCGA
CACCTGTGCCGTCGATATCGTCAGCGCGGCAACGTTGTCCACCGAGCCGCTGATCCGCAGGGAATATCTGCGCCCCGGCA
CCCACGTCGACCTGATCGGGGGCTTCACCCCTGCCATGCGAGAGGCCGATGACGCGTGCTTCGATGGCACGTCGGTGTTT
GTTGATACGGACGAGGCCTTCCGCAAGGCCGGTGACTTGCTGTCGCCTGTCGCCAGCGGCGTGATCGGCCCCGAAGAGAT
TCTCAGCGACCTGGCCGGCCTGTGCAGGGCCGAGCATGCAGGAAGGCGCTCGGCGCAGGAGATCACGGTGTTCAAGGCGG
TGGGGACCGCACTGGAAGACCTGGCCGCGGCCGCCATGTGTTTCGAAGCCGTGACGAACCATTAG

Upstream 100 bases:

>100_bases
GATGACCCCGGCGTATGCCTGGCGTGCCAGGCGGTGCCTGCCAGCGACCTCGTCATTGACGCATGAATCACCATTCCCAT
TTTCTTGAAGAGTTATCGCC

Downstream 100 bases:

>100_bases
AACGATATAGGAAACTGCCAAAGGAGTTCAGCATGAAAGAGACAACAAGCATGGCATTCCCGGATGCCGGGAAGCTGCAA
CAAGGCGGACTGGAACGCCT

Product: ornithine cyclodeaminase

Products: NA

Alternate protein names: OCD [H]

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MLNIDAPTTRASLPFDRLVAALKDAFASGCEVPLRHSHTVTAAPGEPGTLLLMPAWNAASGYMGVKTVCVYPGNHGRKLP
GLYSTYILYRAETGKPLALIDGNEITSRRTAAASALAASFLCRADASSMLVLGAGRVAGLLPYAYRTVRQIRRVAVWDID
TDQAHRLVARLCADGFDADVVDRLDIDTCAVDIVSAATLSTEPLIRREYLRPGTHVDLIGGFTPAMREADDACFDGTSVF
VDTDEAFRKAGDLLSPVASGVIGPEEILSDLAGLCRAEHAGRRSAQEITVFKAVGTALEDLAAAAMCFEAVTNH

Sequences:

>Translated_314_residues
MLNIDAPTTRASLPFDRLVAALKDAFASGCEVPLRHSHTVTAAPGEPGTLLLMPAWNAASGYMGVKTVCVYPGNHGRKLP
GLYSTYILYRAETGKPLALIDGNEITSRRTAAASALAASFLCRADASSMLVLGAGRVAGLLPYAYRTVRQIRRVAVWDID
TDQAHRLVARLCADGFDADVVDRLDIDTCAVDIVSAATLSTEPLIRREYLRPGTHVDLIGGFTPAMREADDACFDGTSVF
VDTDEAFRKAGDLLSPVASGVIGPEEILSDLAGLCRAEHAGRRSAQEITVFKAVGTALEDLAAAAMCFEAVTNH
>Mature_314_residues
MLNIDAPTTRASLPFDRLVAALKDAFASGCEVPLRHSHTVTAAPGEPGTLLLMPAWNAASGYMGVKTVCVYPGNHGRKLP
GLYSTYILYRAETGKPLALIDGNEITSRRTAAASALAASFLCRADASSMLVLGAGRVAGLLPYAYRTVRQIRRVAVWDID
TDQAHRLVARLCADGFDADVVDRLDIDTCAVDIVSAATLSTEPLIRREYLRPGTHVDLIGGFTPAMREADDACFDGTSVF
VDTDEAFRKAGDLLSPVASGVIGPEEILSDLAGLCRAEHAGRRSAQEITVFKAVGTALEDLAAAAMCFEAVTNH

Specific function: Unknown

COG id: COG2423

COG function: function code E; Predicted ornithine cyclodeaminase, mu-crystallin homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ornithine cyclodeaminase family [H]

Homologues:

Organism=Homo sapiens, GI4503065, Length=308, Percent_Identity=28.2467532467532, Blast_Score=118, Evalue=6e-27,
Organism=Homo sapiens, GI62241008, Length=289, Percent_Identity=29.0657439446367, Blast_Score=116, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003462 [H]

Pfam domain/function: PF02423 OCD_Mu_crystall [H]

EC number: =4.3.1.12 [H]

Molecular weight: Translated: 33380; Mature: 33380

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNIDAPTTRASLPFDRLVAALKDAFASGCEVPLRHSHTVTAAPGEPGTLLLMPAWNAAS
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCC
GYMGVKTVCVYPGNHGRKLPGLYSTYILYRAETGKPLALIDGNEITSRRTAAASALAASF
CCCCEEEEEEECCCCCCCCCCHHEEEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHH
LCRADASSMLVLGAGRVAGLLPYAYRTVRQIRRVAVWDIDTDQAHRLVARLCADGFDADV
HHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHCCCCCCH
VDRLDIDTCAVDIVSAATLSTEPLIRREYLRPGTHVDLIGGFTPAMREADDACFDGTSVF
HHHCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEECCCCHHHHHCCCHHCCCCEEE
VDTDEAFRKAGDLLSPVASGVIGPEEILSDLAGLCRAEHAGRRSAQEITVFKAVGTALED
EECHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LAAAAMCFEAVTNH
HHHHHHHHHHHHCC
>Mature Secondary Structure
MLNIDAPTTRASLPFDRLVAALKDAFASGCEVPLRHSHTVTAAPGEPGTLLLMPAWNAAS
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCC
GYMGVKTVCVYPGNHGRKLPGLYSTYILYRAETGKPLALIDGNEITSRRTAAASALAASF
CCCCEEEEEEECCCCCCCCCCHHEEEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHH
LCRADASSMLVLGAGRVAGLLPYAYRTVRQIRRVAVWDIDTDQAHRLVARLCADGFDADV
HHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHCCCCCCH
VDRLDIDTCAVDIVSAATLSTEPLIRREYLRPGTHVDLIGGFTPAMREADDACFDGTSVF
HHHCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEECCCCHHHHHCCCHHCCCCEEE
VDTDEAFRKAGDLLSPVASGVIGPEEILSDLAGLCRAEHAGRRSAQEITVFKAVGTALED
EECHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LAAAAMCFEAVTNH
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3281832; 8045881; 11743193; 11743194 [H]