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The map label for this gene is ydeR [H]

Identifier: 73539471

GI number: 73539471

Start: 2473753

End: 2474955

Strand: Reverse

Name: ydeR [H]

Synonym: Reut_B5649

Alternate gene names: 73539471

Gene position: 2474955-2473753 (Counterclockwise)

Preceding gene: 73539472

Following gene: 73539469

Centisome position: 90.79

GC content: 65.84

Gene sequence:

>1203_bases
ATGAAAACCACAACCTCTCACGCGCCACATACTGCCGATCACGCGGCCGCGCCAATGTCTGGCGCGCTGGTCGGCTTGTT
CGCCCTGTGCGCAGGCGTCCTCGTCGCCAATCTCTATTACGCACAGCCGATCATCGAACTGATTGCACCGGCTGTGGGCC
TGTCCGCGCAAAGCGCCAGCGTGATCGTATCGCTGACCCAGATCGGCTATGCGGTCGGCCTTTTCTTTCTGGTGCCCCTT
GCCGACCTGCAGGAGAACCGGCGTTTGCTGACGATCAGCGGTGTCGCGGCCGCAATCAGCCTGGCAGGCGCCGCCACCGC
GTCGCAACCGGGCGTGTTCCTGCTGGTGTCGCTGCTGCTGGGCCTCAGTTCGGTGAGCGTGCAGATTCTGATTCCGCTGG
CCGCGAACCTTGCCCCTGAGGCGCTGCGGGGACGGACTGTCGGCACCATCATGGGCGGCCTGCTATCCGGCATCCTGCTG
TCCAGGCCGCTGTCGAGCCTGCTTGCGCAGTACTTCGGCTGGCGTGCCGTGTTCTACATCGCCGCCGCGACGACGCTGAT
CACGGTCGGCATCATTACCACGACGCTGCCTCGGCGCACGCCGCAGCATCGGGCCACCTATGCCCAACTGCTCGTATCGT
TGTGGCATCTGTTCACGCGCTTTGCAGTGCTGCGTCAGCGCTCGCTGTACCAGGCCCTCCTCTTTGCGGCCTTCAGCCTG
TTCTGGACCGCTGCACCGCTCGAACTCGCCAGCCATTACGGGCTGTCGCAGTCGCAGATCGGCGTGTTTGCCCTGGTCGG
CGCACTGGGCGCAGTCGCAGCCCCTGTTGCGGGCCGGCTGGCAGACGCGGGGCACACGCGCATTGCCTCATTCCTTGCGA
TGATCGCGGCAGCCATCAGCTTTATTCCGGGCATTGCCGGTGGCGCTGGCGGCCTGTATTGGCTGGCACTCACCGGCATC
GTGCTCGACTTCGCCGTGCAGATGAACATGGTGCTGGGCCAGCGTGCCATCTATGCGCTCGATGCCGCCAGCCGCGGACG
GCTGAACGCACTGTATATGACTGCCATCTTCGCCGGCGGCGCGGTGGGATCCGCGCTGGCCAGCACGCTGTACACGCATC
TCGGTTGGGCCGGCGTGGTCGCGGCAGGCAGCGGTCTTGCGACGGTCTCGCTGGTGGCGCTGGCGATCGCTTCGCGGCGC
TGA

Upstream 100 bases:

>100_bases
GGCTTTGCGCGCCGCGCAACGCAGACTTGCTCTGCGTTGTGATTCAAATTGCGCTTTTACGCTCCTAAGCTTGGGGCACT
GCAACCTGATACCCCAAGCC

Downstream 100 bases:

>100_bases
GACCACGCCGCCGCGGCACGGGCGAGCGATCAGTCCCGACGCCGGGTCGGCCCTGGCAGCGCTGCGAGGAAATCCATGAA
CGCCGCGATTCTGCGCGAAC

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MKTTTSHAPHTADHAAAPMSGALVGLFALCAGVLVANLYYAQPIIELIAPAVGLSAQSASVIVSLTQIGYAVGLFFLVPL
ADLQENRRLLTISGVAAAISLAGAATASQPGVFLLVSLLLGLSSVSVQILIPLAANLAPEALRGRTVGTIMGGLLSGILL
SRPLSSLLAQYFGWRAVFYIAAATTLITVGIITTTLPRRTPQHRATYAQLLVSLWHLFTRFAVLRQRSLYQALLFAAFSL
FWTAAPLELASHYGLSQSQIGVFALVGALGAVAAPVAGRLADAGHTRIASFLAMIAAAISFIPGIAGGAGGLYWLALTGI
VLDFAVQMNMVLGQRAIYALDAASRGRLNALYMTAIFAGGAVGSALASTLYTHLGWAGVVAAGSGLATVSLVALAIASRR

Sequences:

>Translated_400_residues
MKTTTSHAPHTADHAAAPMSGALVGLFALCAGVLVANLYYAQPIIELIAPAVGLSAQSASVIVSLTQIGYAVGLFFLVPL
ADLQENRRLLTISGVAAAISLAGAATASQPGVFLLVSLLLGLSSVSVQILIPLAANLAPEALRGRTVGTIMGGLLSGILL
SRPLSSLLAQYFGWRAVFYIAAATTLITVGIITTTLPRRTPQHRATYAQLLVSLWHLFTRFAVLRQRSLYQALLFAAFSL
FWTAAPLELASHYGLSQSQIGVFALVGALGAVAAPVAGRLADAGHTRIASFLAMIAAAISFIPGIAGGAGGLYWLALTGI
VLDFAVQMNMVLGQRAIYALDAASRGRLNALYMTAIFAGGAVGSALASTLYTHLGWAGVVAAGSGLATVSLVALAIASRR
>Mature_400_residues
MKTTTSHAPHTADHAAAPMSGALVGLFALCAGVLVANLYYAQPIIELIAPAVGLSAQSASVIVSLTQIGYAVGLFFLVPL
ADLQENRRLLTISGVAAAISLAGAATASQPGVFLLVSLLLGLSSVSVQILIPLAANLAPEALRGRTVGTIMGGLLSGILL
SRPLSSLLAQYFGWRAVFYIAAATTLITVGIITTTLPRRTPQHRATYAQLLVSLWHLFTRFAVLRQRSLYQALLFAAFSL
FWTAAPLELASHYGLSQSQIGVFALVGALGAVAAPVAGRLADAGHTRIASFLAMIAAAISFIPGIAGGAGGLYWLALTGI
VLDFAVQMNMVLGQRAIYALDAASRGRLNALYMTAIFAGGAVGSALASTLYTHLGWAGVVAAGSGLATVSLVALAIASRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 41192; Mature: 41192

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTTTSHAPHTADHAAAPMSGALVGLFALCAGVLVANLYYAQPIIELIAPAVGLSAQSAS
CCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
VIVSLTQIGYAVGLFFLVPLADLQENRRLLTISGVAAAISLAGAATASQPGVFLLVSLLL
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHH
GLSSVSVQILIPLAANLAPEALRGRTVGTIMGGLLSGILLSRPLSSLLAQYFGWRAVFYI
CCHHHHHHEEEEHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAATTLITVGIITTTLPRRTPQHRATYAQLLVSLWHLFTRFAVLRQRSLYQALLFAAFSL
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FWTAAPLELASHYGLSQSQIGVFALVGALGAVAAPVAGRLADAGHTRIASFLAMIAAAIS
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
FIPGIAGGAGGLYWLALTGIVLDFAVQMNMVLGQRAIYALDAASRGRLNALYMTAIFAGG
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHCC
AVGSALASTLYTHLGWAGVVAAGSGLATVSLVALAIASRR
HHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKTTTSHAPHTADHAAAPMSGALVGLFALCAGVLVANLYYAQPIIELIAPAVGLSAQSAS
CCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
VIVSLTQIGYAVGLFFLVPLADLQENRRLLTISGVAAAISLAGAATASQPGVFLLVSLLL
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHH
GLSSVSVQILIPLAANLAPEALRGRTVGTIMGGLLSGILLSRPLSSLLAQYFGWRAVFYI
CCHHHHHHEEEEHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAATTLITVGIITTTLPRRTPQHRATYAQLLVSLWHLFTRFAVLRQRSLYQALLFAAFSL
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FWTAAPLELASHYGLSQSQIGVFALVGALGAVAAPVAGRLADAGHTRIASFLAMIAAAIS
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
FIPGIAGGAGGLYWLALTGIVLDFAVQMNMVLGQRAIYALDAASRGRLNALYMTAIFAGG
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHCC
AVGSALASTLYTHLGWAGVVAAGSGLATVSLVALAIASRR
HHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]