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The map label for this gene is stpA [C]

Identifier: 73539418

GI number: 73539418

Start: 2413488

End: 2413796

Strand: Reverse

Name: stpA [C]

Synonym: Reut_B5596

Alternate gene names: 73539418

Gene position: 2413796-2413488 (Counterclockwise)

Preceding gene: 73539444

Following gene: 73539415

Centisome position: 88.54

GC content: 58.25

Gene sequence:

>309_bases
ATGGCGACTTATCAGGAAATCGTTCAGAAAATCAACGAACTGCAAAAACAGGCCGAGGAAATCAAGGCACGCGAGCAGGC
CGCAGTGATTGCCGATATTCGTGAAAAAATCGACCAATATGGCCTGACCGCGGAAGATCTCGGTTTTGGCGTGAAGGCCG
TGGCCGGCAAGAAGGCGACCAACCGCAAGGTACCCGTGCGTTATCGCGACAGCGCTGGTAACACCTGGACTGGCCGCGGC
AAGCGTCCGGGCTGGCTGACCCAGGCCCTGGCGGCCGGCAAATCGGTGGACGATTTCCTGATCCGCTGA

Upstream 100 bases:

>100_bases
TAATTTTGCATGCGAAACGCAGGTGAAGGATTTGCAGCGGCGCGGGAGCCCGATATAATGCTTTTCGACATACCGCACCC
ACCCGATACCCGAGGATCAA

Downstream 100 bases:

>100_bases
TCATTCGGTTGCTTCTGCCAAAGCAAAACGCCACGGAAACCTCCGTGGCGTTTTTGTTTTCTCAGCGTTTGCCGCAAACC
GCGGCAACGCAGAAACGGGT

Product: nucleoid protein H-NS

Products: NA

Alternate protein names: Histone-Like Nucleoid-Structuring Protein H-NS; H-NS Histone Family Protein; Nucleoid Protein H-NS; Hns-Like Protein; H-NS-Like Proteins; HNS-Like Transcription Regulator Protein; HNS-Like Transcriptional Regulator; H-NS-Like Transcription Regulator

Number of amino acids: Translated: 102; Mature: 101

Protein sequence:

>102_residues
MATYQEIVQKINELQKQAEEIKAREQAAVIADIREKIDQYGLTAEDLGFGVKAVAGKKATNRKVPVRYRDSAGNTWTGRG
KRPGWLTQALAAGKSVDDFLIR

Sequences:

>Translated_102_residues
MATYQEIVQKINELQKQAEEIKAREQAAVIADIREKIDQYGLTAEDLGFGVKAVAGKKATNRKVPVRYRDSAGNTWTGRG
KRPGWLTQALAAGKSVDDFLIR
>Mature_101_residues
ATYQEIVQKINELQKQAEEIKAREQAAVIADIREKIDQYGLTAEDLGFGVKAVAGKKATNRKVPVRYRDSAGNTWTGRGK
RPGWLTQALAAGKSVDDFLIR

Specific function: It May Act In A Fashion Similar To H-Ns Proteins. [C]

COG id: COG2916

COG function: function code R; DNA-binding protein H-NS

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11319; Mature: 11188

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATYQEIVQKINELQKQAEEIKAREQAAVIADIREKIDQYGLTAEDLGFGVKAVAGKKAT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHCCCCCC
NRKVPVRYRDSAGNTWTGRGKRPGWLTQALAAGKSVDDFLIR
CCCCCEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHCC
>Mature Secondary Structure 
ATYQEIVQKINELQKQAEEIKAREQAAVIADIREKIDQYGLTAEDLGFGVKAVAGKKAT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHCCCCCC
NRKVPVRYRDSAGNTWTGRGKRPGWLTQALAAGKSVDDFLIR
CCCCCEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA