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The map label for this gene is nirS [H]

Identifier: 73538835

GI number: 73538835

Start: 1742984

End: 1744687

Strand: Direct

Name: nirS [H]

Synonym: Reut_B5010

Alternate gene names: 73538835

Gene position: 1742984-1744687 (Clockwise)

Preceding gene: 73538834

Following gene: 73538836

Centisome position: 63.94

GC content: 62.5

Gene sequence:

>1704_bases
ATGACAGCTTTCCCCAACTCGCTGAAGAACAGCACTATGAAAGCGAAATCCTGGAGGTTCACTGCGCTTGCGGCATTGCC
GCTTACTCTCTGGCTGAGCCACGCCAGCGCAGACACACCGGCAGCCGCATCTGCCACGCCGCCGATGGCAGCGACGCCTA
CCCTGACACCCACCGAGTTCGACCATGCCCGGCAAATCTACTTCGAGCGCTGCGCCGGCTGCCACGGCGTGCTGCGCAAA
GGCGCGACCGGCAAGCCGCTGACGCCCGACATCACGCGTGCGCGCGGCAGCGAGTACCTGAAGACCTTCATCAAGTACGG
CAGCCCCGCTGGCATGCCGAACTGGGGCACTTCGGGGGACCTGTCCGACAGCGAGGTCGACCTGATGGCCCGCTATATCC
AGCTCGATCCGCCGACACCGCCGGAGTTCTCGCTTGCGGACATCGAGAAGAGCCGCAAGGACATCGTGCCCGTGGCGAAG
CGTCCCGCGCGCAAGATGAACCAGTACAACCTGGACAACCTGTTCTCGGTCACGCTGCGCGATGCCGGCGAGGTCGCGCT
GATCGACGGCGACAGCAAGAAGATCATCAACATCGTGAAGACCGGCTATGCGGTGCATATTTCGCGCATGTCGGCATCGG
GCCGTTACCTGTACGTGATCGGACGCGATGCACGCCTGGACCTGATCGATCTGTGGCTGCCGAAGCCCGACATCGTCGCC
GAGGTCAAGATCGGTCTTGAAGCGCGCTCGGTGGAGACGTCCAAGTACAAGGGCTACGAGGACAAGTACGCCGTGGCAGG
CTCCTACTGGCCGCCGCAGTACGTGATCATGGAAGGCGACACGCTCAAGCCGCTCAAGGTCGTTTCGACGCGCGGCATGA
CCGTGGACAACGAGTACCACCCCGAGCCGCGCGTGGCCTCGATCGTCGCGAGCCACTTCCATCCGGAGTTCGTGATCAAC
GCCAAGGAAACCGGCAAGATCATGATGGTCAACTACGCGGACCTGAACAACCTCAAGACCACGACCATCGACTCCGCCAA
GTTCCTGCATGACGGTGGCTTCGATGCAACGGGCCGCTACTTCCTGGTGGCCGCCAATGCCTCGAACAAGATAGCGGTCG
TCGATACCAAGGAGGACAAGCTCGCTGCGCTGGTCGACGTGGGCAAGACGCCGCACCCGGGCCGCGGTGCGAACTTCGTC
CATCCGAAGTTCGGACCGGTCTGGGCCACGAGCCATCTCGGCGACGAGACCATCAGCCTGATCGGTACCGACCCCGTGGG
ACACAAGGCGCAGGCATGGAAGGTCGTGCAGACGGTCAAGGGCCAGGGCGGCGGTTCGCTGTTCATCAAGACGCATCCGA
AGTCAACCAACCTGTGGGTCGATACGCCGCTGAACCCCGACGCCAAGCTCAACCAGTCGGTGGCCGTATTCGATACGCGC
AATCTGGAAGCAGGCTTCCAGGTACTGCCGGTCGCCGAATGGGCCAACCTGAAAGGCGAAGGCGCCAAGCGCGTGGTGCA
GGCCGAATACAACAAGGCCGGCGACGAGGTGTGGTTCTCCGTATGGGGCACCAAGGATGGCGAGTCTGCGCTGGTCGTCG
TCGATGACAAGACGCGCAAGCTCAAGACGGTGATCAAGGATCCGCGCCTGATCACGCCTACCGGCAAGTTCAACGCCTAC
AACACGCAGCACGACATCTACTGA

Upstream 100 bases:

>100_bases
GCCCGCTGCCGTTGACAACAGTCAACCCGGCACTGCGCAATGTTCACCATGATCTCCATGACCGCCGGCGCAACAAGCAT
CACGAAAAAATACGGCCGGC

Downstream 100 bases:

>100_bases
TCGTGCGTGCGGTGCGGAGCCATGTACGTGGTTCGGCACCACACGCCAACGGAGCCAAGAGATGCAAACCATCCGAATCG
CCATCGCCGCGGCCGCCTGT

Product: hydroxylamine reductase

Products: NA

Alternate protein names: Cytochrome cd1; Cytochrome oxidase; Hydroxylamine reductase [H]

Number of amino acids: Translated: 567; Mature: 566

Protein sequence:

>567_residues
MTAFPNSLKNSTMKAKSWRFTALAALPLTLWLSHASADTPAAASATPPMAATPTLTPTEFDHARQIYFERCAGCHGVLRK
GATGKPLTPDITRARGSEYLKTFIKYGSPAGMPNWGTSGDLSDSEVDLMARYIQLDPPTPPEFSLADIEKSRKDIVPVAK
RPARKMNQYNLDNLFSVTLRDAGEVALIDGDSKKIINIVKTGYAVHISRMSASGRYLYVIGRDARLDLIDLWLPKPDIVA
EVKIGLEARSVETSKYKGYEDKYAVAGSYWPPQYVIMEGDTLKPLKVVSTRGMTVDNEYHPEPRVASIVASHFHPEFVIN
AKETGKIMMVNYADLNNLKTTTIDSAKFLHDGGFDATGRYFLVAANASNKIAVVDTKEDKLAALVDVGKTPHPGRGANFV
HPKFGPVWATSHLGDETISLIGTDPVGHKAQAWKVVQTVKGQGGGSLFIKTHPKSTNLWVDTPLNPDAKLNQSVAVFDTR
NLEAGFQVLPVAEWANLKGEGAKRVVQAEYNKAGDEVWFSVWGTKDGESALVVVDDKTRKLKTVIKDPRLITPTGKFNAY
NTQHDIY

Sequences:

>Translated_567_residues
MTAFPNSLKNSTMKAKSWRFTALAALPLTLWLSHASADTPAAASATPPMAATPTLTPTEFDHARQIYFERCAGCHGVLRK
GATGKPLTPDITRARGSEYLKTFIKYGSPAGMPNWGTSGDLSDSEVDLMARYIQLDPPTPPEFSLADIEKSRKDIVPVAK
RPARKMNQYNLDNLFSVTLRDAGEVALIDGDSKKIINIVKTGYAVHISRMSASGRYLYVIGRDARLDLIDLWLPKPDIVA
EVKIGLEARSVETSKYKGYEDKYAVAGSYWPPQYVIMEGDTLKPLKVVSTRGMTVDNEYHPEPRVASIVASHFHPEFVIN
AKETGKIMMVNYADLNNLKTTTIDSAKFLHDGGFDATGRYFLVAANASNKIAVVDTKEDKLAALVDVGKTPHPGRGANFV
HPKFGPVWATSHLGDETISLIGTDPVGHKAQAWKVVQTVKGQGGGSLFIKTHPKSTNLWVDTPLNPDAKLNQSVAVFDTR
NLEAGFQVLPVAEWANLKGEGAKRVVQAEYNKAGDEVWFSVWGTKDGESALVVVDDKTRKLKTVIKDPRLITPTGKFNAY
NTQHDIY
>Mature_566_residues
TAFPNSLKNSTMKAKSWRFTALAALPLTLWLSHASADTPAAASATPPMAATPTLTPTEFDHARQIYFERCAGCHGVLRKG
ATGKPLTPDITRARGSEYLKTFIKYGSPAGMPNWGTSGDLSDSEVDLMARYIQLDPPTPPEFSLADIEKSRKDIVPVAKR
PARKMNQYNLDNLFSVTLRDAGEVALIDGDSKKIINIVKTGYAVHISRMSASGRYLYVIGRDARLDLIDLWLPKPDIVAE
VKIGLEARSVETSKYKGYEDKYAVAGSYWPPQYVIMEGDTLKPLKVVSTRGMTVDNEYHPEPRVASIVASHFHPEFVINA
KETGKIMMVNYADLNNLKTTTIDSAKFLHDGGFDATGRYFLVAANASNKIAVVDTKEDKLAALVDVGKTPHPGRGANFVH
PKFGPVWATSHLGDETISLIGTDPVGHKAQAWKVVQTVKGQGGGSLFIKTHPKSTNLWVDTPLNPDAKLNQSVAVFDTRN
LEAGFQVLPVAEWANLKGEGAKRVVQAEYNKAGDEVWFSVWGTKDGESALVVVDDKTRKLKTVIKDPRLITPTGKFNAYN
TQHDIY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR011048
- InterPro:   IPR003143 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: =1.7.2.1; =1.7.99.1 [H]

Molecular weight: Translated: 62158; Mature: 62027

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAFPNSLKNSTMKAKSWRFTALAALPLTLWLSHASADTPAAASATPPMAATPTLTPTEF
CCCCCCCHHCCCEECCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCH
DHARQIYFERCAGCHGVLRKGATGKPLTPDITRARGSEYLKTFIKYGSPAGMPNWGTSGD
HHHHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHHCCHHHHHHHHHCCCCCCCCCCCCCCC
LSDSEVDLMARYIQLDPPTPPEFSLADIEKSRKDIVPVAKRPARKMNQYNLDNLFSVTLR
CCCHHHHHEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHCCCCCCCEEEEEEC
DAGEVALIDGDSKKIINIVKTGYAVHISRMSASGRYLYVIGRDARLDLIDLWLPKPDIVA
CCCCEEEEECCCHHHHHEECCCEEEEEEEECCCCCEEEEEECCCCEEEEEEECCCCCEEE
EVKIGLEARSVETSKYKGYEDKYAVAGSYWPPQYVIMEGDTLKPLKVVSTRGMTVDNEYH
EEEECEEEECCCHHHCCCCCCCEEEECCCCCCEEEEEECCCCCCEEEEEECCCEECCCCC
PEPRVASIVASHFHPEFVINAKETGKIMMVNYADLNNLKTTTIDSAKFLHDGGFDATGRY
CCCHHHHHHHHHCCCEEEEECCCCCCEEEEEECCCCCCEEEEECCHHHEECCCCCCCCCE
FLVAANASNKIAVVDTKEDKLAALVDVGKTPHPGRGANFVHPKFGPVWATSHLGDETISL
EEEEECCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEE
IGTDPVGHKAQAWKVVQTVKGQGGGSLFIKTHPKSTNLWVDTPLNPDAKLNQSVAVFDTR
EECCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCCEEEEEECC
NLEAGFQVLPVAEWANLKGEGAKRVVQAEYNKAGDEVWFSVWGTKDGESALVVVDDKTRK
CCCCCCEEEEEHHHCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEECCCCHH
LKTVIKDPRLITPTGKFNAYNTQHDIY
HHHHHCCCEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TAFPNSLKNSTMKAKSWRFTALAALPLTLWLSHASADTPAAASATPPMAATPTLTPTEF
CCCCCCHHCCCEECCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCH
DHARQIYFERCAGCHGVLRKGATGKPLTPDITRARGSEYLKTFIKYGSPAGMPNWGTSGD
HHHHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHHCCHHHHHHHHHCCCCCCCCCCCCCCC
LSDSEVDLMARYIQLDPPTPPEFSLADIEKSRKDIVPVAKRPARKMNQYNLDNLFSVTLR
CCCHHHHHEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHCCCCCCCEEEEEEC
DAGEVALIDGDSKKIINIVKTGYAVHISRMSASGRYLYVIGRDARLDLIDLWLPKPDIVA
CCCCEEEEECCCHHHHHEECCCEEEEEEEECCCCCEEEEEECCCCEEEEEEECCCCCEEE
EVKIGLEARSVETSKYKGYEDKYAVAGSYWPPQYVIMEGDTLKPLKVVSTRGMTVDNEYH
EEEECEEEECCCHHHCCCCCCCEEEECCCCCCEEEEEECCCCCCEEEEEECCCEECCCCC
PEPRVASIVASHFHPEFVINAKETGKIMMVNYADLNNLKTTTIDSAKFLHDGGFDATGRY
CCCHHHHHHHHHCCCEEEEECCCCCCEEEEEECCCCCCEEEEECCHHHEECCCCCCCCCE
FLVAANASNKIAVVDTKEDKLAALVDVGKTPHPGRGANFVHPKFGPVWATSHLGDETISL
EEEEECCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEE
IGTDPVGHKAQAWKVVQTVKGQGGGSLFIKTHPKSTNLWVDTPLNPDAKLNQSVAVFDTR
EECCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCCEEEEEECC
NLEAGFQVLPVAEWANLKGEGAKRVVQAEYNKAGDEVWFSVWGTKDGESALVVVDDKTRK
CCCCCCEEEEEHHHCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEECCCCHH
LKTVIKDPRLITPTGKFNAYNTQHDIY
HHHHHCCCEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2506077; 10984043; 2155133; 2152881; 9331415; 9760233; 10329702; 11226222; 11563915 [H]