| Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007348 |
| Length | 2,726,152 |
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The map label for this gene is rsbRA [H]
Identifier: 73538795
GI number: 73538795
Start: 1697313
End: 1698167
Strand: Direct
Name: rsbRA [H]
Synonym: Reut_B4970
Alternate gene names: 73538795
Gene position: 1697313-1698167 (Clockwise)
Preceding gene: 73538794
Following gene: 73538796
Centisome position: 62.26
GC content: 62.69
Gene sequence:
>855_bases ATGCCCCCAGAAAACCAGCGACTAGCCGATCTTTTGCGCAACGAGCAGGACAGCGTGATCCAGGGATGGACGGCGGAGTA CCAGGTCTATGCAGAGGGGAAAGCGCTGACCCACGATCTGATTTCCGAGCAGCGGGCGATCCTGCGGGCACTGGAAGCCG GCATGCGTGGCGCCGGGGATGCCGCCCAGTTCAGAGCCGCGGCATCATGGACTGCGTTGCGAGAGACGCTGACGCGGCTA TCCAGCGCGCGCGCCGCACAGGGCGAAACCGCCGACGTGACCAGTGGCTTCGTGCTGGCGCTCAAGCGGCCGATCTTCGA AGCCCTGCAGCGGCAGGCTGGGGGTGTGGAGGACCAGATCAACGTCATCTGGGCTGCCTCGGACATTGTCGACCGCATGG CGCAGTGGACTGTGTCCTCGTACCAGAAAACGCGCGAAGAGATCATCGTGCGTCAGCAGCAGGAGCTGATGGAACTGTCG ACGCCTGTCATCAAGCTGTGGGAAGGAGTACTGGCGGTGCCCGTGATCGGAACGCTCGACAGCAGCCGCTCGCAGATGGT CATGGAAACACTGCTGGAGCGGCTGGTGGAAACCGGCTCGGAACTGGCCATCATCGACATTACAGGGGTGCCTACCGTGG ATACGCTGGTGGCGCAGCACCTGATCAAGACGGTGACCGCCATTCGATTGATGGGTGCCGAAAGCATCATCAGTGGTATC CGCCCACAGATTGCACAAACCATTGTCCATCTGGGCATCGACCTGCAAGGCATCACTACCAAGTCCACCCTGGCCGATGC GCTCGCCACCGCGATGCGCCTGACGGGACACACGGTGTCGCGCGGCGCTGCCTGA
Upstream 100 bases:
>100_bases GCCGATAGTGCACACCCGTGATCTTTCCTAGAATGAAGTGATCCACTTGCCTGACGCAAGCTTGAGGCGGGTGCCTATCA CATACTGACCCCGACACCCC
Downstream 100 bases:
>100_bases GACGCAGAAACCGCCATGGAACGGATTCCAATCTTGCGGATGGGCAAGCACCTGCTCGTGACCATCCAGATCGATATGCA GGACCAGACCGCTCTGATGT
Product: Sulfate transporter/antisigma-factor antagonist STAS
Products: NA
Alternate protein names: Stressosome protein rsbRA [H]
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MPPENQRLADLLRNEQDSVIQGWTAEYQVYAEGKALTHDLISEQRAILRALEAGMRGAGDAAQFRAAASWTALRETLTRL SSARAAQGETADVTSGFVLALKRPIFEALQRQAGGVEDQINVIWAASDIVDRMAQWTVSSYQKTREEIIVRQQQELMELS TPVIKLWEGVLAVPVIGTLDSSRSQMVMETLLERLVETGSELAIIDITGVPTVDTLVAQHLIKTVTAIRLMGAESIISGI RPQIAQTIVHLGIDLQGITTKSTLADALATAMRLTGHTVSRGAA
Sequences:
>Translated_284_residues MPPENQRLADLLRNEQDSVIQGWTAEYQVYAEGKALTHDLISEQRAILRALEAGMRGAGDAAQFRAAASWTALRETLTRL SSARAAQGETADVTSGFVLALKRPIFEALQRQAGGVEDQINVIWAASDIVDRMAQWTVSSYQKTREEIIVRQQQELMELS TPVIKLWEGVLAVPVIGTLDSSRSQMVMETLLERLVETGSELAIIDITGVPTVDTLVAQHLIKTVTAIRLMGAESIISGI RPQIAQTIVHLGIDLQGITTKSTLADALATAMRLTGHTVSRGAA >Mature_283_residues PPENQRLADLLRNEQDSVIQGWTAEYQVYAEGKALTHDLISEQRAILRALEAGMRGAGDAAQFRAAASWTALRETLTRLS SARAAQGETADVTSGFVLALKRPIFEALQRQAGGVEDQINVIWAASDIVDRMAQWTVSSYQKTREEIIVRQQQELMELST PVIKLWEGVLAVPVIGTLDSSRSQMVMETLLERLVETGSELAIIDITGVPTVDTLVAQHLIKTVTAIRLMGAESIISGIR PQIAQTIVHLGIDLQGITTKSTLADALATAMRLTGHTVSRGAA
Specific function: Negative regulator of sigma-B activity. Non- phosphorylated rsbS binds to rsbT, preventing its association with rsbU. Requires any one of rsbRA, rsbRB, rsbRC or rsbRD to sequester rsbT. When rsbS and the rsbR paralog(s) are phosphorylated, they release rs
COG id: COG1366
COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 STAS domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014792 - InterPro: IPR002645 [H]
Pfam domain/function: PF08678 Rsbr_N; PF01740 STAS [H]
EC number: NA
Molecular weight: Translated: 30852; Mature: 30721
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: PS50801 STAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPENQRLADLLRNEQDSVIQGWTAEYQVYAEGKALTHDLISEQRAILRALEAGMRGAGD CCCCHHHHHHHHCCCCHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCC AAQFRAAASWTALRETLTRLSSARAAQGETADVTSGFVLALKRPIFEALQRQAGGVEDQI HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH NVIWAASDIVDRMAQWTVSSYQKTREEIIVRQQQELMELSTPVIKLWEGVLAVPVIGTLD HEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SSRSQMVMETLLERLVETGSELAIIDITGVPTVDTLVAQHLIKTVTAIRLMGAESIISGI CHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RPQIAQTIVHLGIDLQGITTKSTLADALATAMRLTGHTVSRGAA CHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure PPENQRLADLLRNEQDSVIQGWTAEYQVYAEGKALTHDLISEQRAILRALEAGMRGAGD CCCHHHHHHHHCCCCHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCC AAQFRAAASWTALRETLTRLSSARAAQGETADVTSGFVLALKRPIFEALQRQAGGVEDQI HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH NVIWAASDIVDRMAQWTVSSYQKTREEIIVRQQQELMELSTPVIKLWEGVLAVPVIGTLD HEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SSRSQMVMETLLERLVETGSELAIIDITGVPTVDTLVAQHLIKTVTAIRLMGAESIISGI CHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RPQIAQTIVHLGIDLQGITTKSTLADALATAMRLTGHTVSRGAA CHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8002610; 9384377; 11157946; 10329124 [H]