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The map label for this gene is yidE [C]

Identifier: 73537972

GI number: 73537972

Start: 779257

End: 780849

Strand: Reverse

Name: yidE [C]

Synonym: Reut_B4141

Alternate gene names: 73537972

Gene position: 780849-779257 (Counterclockwise)

Preceding gene: 73537973

Following gene: 73537971

Centisome position: 28.64

GC content: 62.96

Gene sequence:

>1593_bases
ATGGATGCAGTCCGGGTATTGTTCGAAACCCAGCCCTTGTTCACGTTGCTCCTTACGATTGCACTGGGCTACGTTGTCGG
CGAAATCAATATCAAAGGCGTCGCGCTGGGATCCGGAGCCGTCCTGTTTGTCGGATTGGCGATCGGGGGCTTCGCGCCCA
AAGCGGCACCGCCTGCGCTGGTCGGGACCCTGGGCCTGCTGCTGTTCCTCTATGGCATTGGCATCCAGTACGGCGCCCAA
TTCTTCGAGGGGCTGACCAGCGTCCGCGGTCTGAAGGCCAATGCCGCCGCGGCTGTGGGTGTTATCGGTGCCGGCATGGC
GTCGCTGGCGCTGGTACCGCTGTTCGGCCTGCGGCTCGATGAGTCGCTGGGTATCTTTGCGGGTACCGGGACCAGCACCG
CGACATTGCAGGCCGTCATTGCGGCCATGAAGGGCGATGGCGCGGCGGTTGGCTACAGCGTGGCATACCCGTTCGGGGTC
GCGGGCCCGATCCTGTTGCTCTATGCCCTCAGCGTATTGCTGAAAGCGAAAATCGAGGCGCCAGCGGCCAAGATCCTCGA
GACGGGCGAGATTTCCCTGCGCAACCCCGAGATCGTCGGCCTCACGCTTGCCCAGCTGAAGGCGCGCCTGCCGGTTGGAC
TCGCCATTGCCGCGGTGCGTCGCGAGCACCATAACCAGCTGCCGACCGAAGACCTTGTCCTGCGCCAGGACGACGTTCTG
CTCGCGACATCCACGGAGCCGGCCTTGCTTCGGGAAGCTGCTGGCCTGCTGGGGGAACTGCAGCCCGGCCGGATTAGCAG
TCACCGCGAGGACCTGGACTATGTCCGCTTGTTTGCCTCAAGCCGCGCCGTGGTCGGGCTTGCGCTACGCGATATCCGCT
TTCCCGATGGCATTACAGGTTCGATCGTCCAGGTACGAAGGGGCGACGCCGACATGCTGCCAACCCCCGAACTCATCCTC
GAAGTGGGCGACCGGGTAGGAGTGCTGGTCAATCGCGCTCATACCAAGGCCATGCGCAAGCTTTTCGGCGACTCCATCAA
GGGGACCGCCGAACTGAGCTTTATTTCCATCGGCATCGGTGCGGCGCTCGGCCTGTTGGCGGGCATGATCCCCTTGCCGA
TCCCCGGCGCCGGCAAGCTGACCCTCGGCTTGGCGGCTCTGCTGCTGGTTGCGCTGTATCTGGGCAAGATCCGCCGGTCC
GGCCCGCTGGTCTGGACCATGCCGCTTTCCGCCAATCTGGTGTTGCGCAATCTCGGGCTCACTATCTTCCTGGCACAGGT
GGGCATATCGTCAGGACCGAAATTCTTCTCGACCATTGCCATCACCGGCGCTTCACTGCTCCTTTACAGCGTGCTGATTG
TGCTGGTGCTCGTGCTGGTCACGGCACTGGCTTGCCTGTGGATCTTCAGGATGCCCTTCGATGTCACCGCCGGCGTCATC
TGCGGCGCGACCGGTAATCCGGCAATCCTGGCGTTCGCCAACCGCGTAGCGCCCACGGAGCAGCCCGATATCGGCTACGC
CATGATCTTTCCTTCGATGACGGTCACAAAAATCCTGTTTGTGGAGATTGTCATGGTCCTGGCTGGCGGGTAG

Upstream 100 bases:

>100_bases
TTCGGGCCCAGAGGGGGAAGGGCATGCGCTCGCCTGCTTGTCCCTTTCCGCTGGCAATACCGGCCCGTCCTGCTGATCTT
CCGGCCAGAAGGAGATGGCG

Downstream 100 bases:

>100_bases
GGCAATCTGGCATGCCTGCCCGAAGCCGGGGGACCTCGTTCCGATCCGGAGAGAAGCGATGAAAGCTGCCGTATTCAGCG
CCAAGCCTTACGACCGAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 530; Mature: 530

Protein sequence:

>530_residues
MDAVRVLFETQPLFTLLLTIALGYVVGEINIKGVALGSGAVLFVGLAIGGFAPKAAPPALVGTLGLLLFLYGIGIQYGAQ
FFEGLTSVRGLKANAAAAVGVIGAGMASLALVPLFGLRLDESLGIFAGTGTSTATLQAVIAAMKGDGAAVGYSVAYPFGV
AGPILLLYALSVLLKAKIEAPAAKILETGEISLRNPEIVGLTLAQLKARLPVGLAIAAVRREHHNQLPTEDLVLRQDDVL
LATSTEPALLREAAGLLGELQPGRISSHREDLDYVRLFASSRAVVGLALRDIRFPDGITGSIVQVRRGDADMLPTPELIL
EVGDRVGVLVNRAHTKAMRKLFGDSIKGTAELSFISIGIGAALGLLAGMIPLPIPGAGKLTLGLAALLLVALYLGKIRRS
GPLVWTMPLSANLVLRNLGLTIFLAQVGISSGPKFFSTIAITGASLLLYSVLIVLVLVLVTALACLWIFRMPFDVTAGVI
CGATGNPAILAFANRVAPTEQPDIGYAMIFPSMTVTKILFVEIVMVLAGG

Sequences:

>Translated_530_residues
MDAVRVLFETQPLFTLLLTIALGYVVGEINIKGVALGSGAVLFVGLAIGGFAPKAAPPALVGTLGLLLFLYGIGIQYGAQ
FFEGLTSVRGLKANAAAAVGVIGAGMASLALVPLFGLRLDESLGIFAGTGTSTATLQAVIAAMKGDGAAVGYSVAYPFGV
AGPILLLYALSVLLKAKIEAPAAKILETGEISLRNPEIVGLTLAQLKARLPVGLAIAAVRREHHNQLPTEDLVLRQDDVL
LATSTEPALLREAAGLLGELQPGRISSHREDLDYVRLFASSRAVVGLALRDIRFPDGITGSIVQVRRGDADMLPTPELIL
EVGDRVGVLVNRAHTKAMRKLFGDSIKGTAELSFISIGIGAALGLLAGMIPLPIPGAGKLTLGLAALLLVALYLGKIRRS
GPLVWTMPLSANLVLRNLGLTIFLAQVGISSGPKFFSTIAITGASLLLYSVLIVLVLVLVTALACLWIFRMPFDVTAGVI
CGATGNPAILAFANRVAPTEQPDIGYAMIFPSMTVTKILFVEIVMVLAGG
>Mature_530_residues
MDAVRVLFETQPLFTLLLTIALGYVVGEINIKGVALGSGAVLFVGLAIGGFAPKAAPPALVGTLGLLLFLYGIGIQYGAQ
FFEGLTSVRGLKANAAAAVGVIGAGMASLALVPLFGLRLDESLGIFAGTGTSTATLQAVIAAMKGDGAAVGYSVAYPFGV
AGPILLLYALSVLLKAKIEAPAAKILETGEISLRNPEIVGLTLAQLKARLPVGLAIAAVRREHHNQLPTEDLVLRQDDVL
LATSTEPALLREAAGLLGELQPGRISSHREDLDYVRLFASSRAVVGLALRDIRFPDGITGSIVQVRRGDADMLPTPELIL
EVGDRVGVLVNRAHTKAMRKLFGDSIKGTAELSFISIGIGAALGLLAGMIPLPIPGAGKLTLGLAALLLVALYLGKIRRS
GPLVWTMPLSANLVLRNLGLTIFLAQVGISSGPKFFSTIAITGASLLLYSVLIVLVLVLVTALACLWIFRMPFDVTAGVI
CGATGNPAILAFANRVAPTEQPDIGYAMIFPSMTVTKILFVEIVMVLAGG

Specific function: Unknown

COG id: COG2985

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI87082315, Length=540, Percent_Identity=29.4444444444444, Blast_Score=195, Evalue=6e-51,
Organism=Escherichia coli, GI1787071, Length=545, Percent_Identity=24.2201834862385, Blast_Score=80, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006037
- InterPro:   IPR006512 [H]

Pfam domain/function: PF06826 Asp-Al_Ex; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 55106; Mature: 55106

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAVRVLFETQPLFTLLLTIALGYVVGEINIKGVALGSGAVLFVGLAIGGFAPKAAPPAL
CCCEEEEECCCHHHHHHHHHHHHHHHEEEEEEEEEECCCHHHHHHHHHCCCCCCCCCHHH
VGTLGLLLFLYGIGIQYGAQFFEGLTSVRGLKANAAAAVGVIGAGMASLALVPLFGLRLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEC
ESLGIFAGTGTSTATLQAVIAAMKGDGAAVGYSVAYPFGVAGPILLLYALSVLLKAKIEA
CCCCEEEECCCCHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCC
PAAKILETGEISLRNPEIVGLTLAQLKARLPVGLAIAAVRREHHNQLPTEDLVLRQDDVL
CHHHHHCCCCEEECCCCEEEEEHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHEEECCCEE
LATSTEPALLREAAGLLGELQPGRISSHREDLDYVRLFASSRAVVGLALRDIRFPDGITG
EEECCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHEEHHHHHCCCCCCCCC
SIVQVRRGDADMLPTPELILEVGDRVGVLVNRAHTKAMRKLFGDSIKGTAELSFISIGIG
CEEEEECCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEHHH
AALGLLAGMIPLPIPGAGKLTLGLAALLLVALYLGKIRRSGPLVWTMPLSANLVLRNLGL
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHCCH
TIFLAQVGISSGPKFFSTIAITGASLLLYSVLIVLVLVLVTALACLWIFRMPFDVTAGVI
HEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCEE
CGATGNPAILAFANRVAPTEQPDIGYAMIFPSMTVTKILFVEIVMVLAGG
ECCCCCCEEEEEEHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDAVRVLFETQPLFTLLLTIALGYVVGEINIKGVALGSGAVLFVGLAIGGFAPKAAPPAL
CCCEEEEECCCHHHHHHHHHHHHHHHEEEEEEEEEECCCHHHHHHHHHCCCCCCCCCHHH
VGTLGLLLFLYGIGIQYGAQFFEGLTSVRGLKANAAAAVGVIGAGMASLALVPLFGLRLD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEC
ESLGIFAGTGTSTATLQAVIAAMKGDGAAVGYSVAYPFGVAGPILLLYALSVLLKAKIEA
CCCCEEEECCCCHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCC
PAAKILETGEISLRNPEIVGLTLAQLKARLPVGLAIAAVRREHHNQLPTEDLVLRQDDVL
CHHHHHCCCCEEECCCCEEEEEHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHEEECCCEE
LATSTEPALLREAAGLLGELQPGRISSHREDLDYVRLFASSRAVVGLALRDIRFPDGITG
EEECCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHEEHHHHHCCCCCCCCC
SIVQVRRGDADMLPTPELILEVGDRVGVLVNRAHTKAMRKLFGDSIKGTAELSFISIGIG
CEEEEECCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEHHH
AALGLLAGMIPLPIPGAGKLTLGLAALLLVALYLGKIRRSGPLVWTMPLSANLVLRNLGL
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHCCH
TIFLAQVGISSGPKFFSTIAITGASLLLYSVLIVLVLVLVTALACLWIFRMPFDVTAGVI
HEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCEE
CGATGNPAILAFANRVAPTEQPDIGYAMIFPSMTVTKILFVEIVMVLAGG
ECCCCCCEEEEEEHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA