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The map label for this gene is cydA [H]

Identifier: 73537934

GI number: 73537934

Start: 745868

End: 747319

Strand: Reverse

Name: cydA [H]

Synonym: Reut_B4101

Alternate gene names: 73537934

Gene position: 747319-745868 (Counterclockwise)

Preceding gene: 73537935

Following gene: 73537933

Centisome position: 27.41

GC content: 64.26

Gene sequence:

>1452_bases
ATGCATGGACTTACAGCGCTGGAACTCGCCCGGATCCAGTTCGGATTCACGGTTTCATTTCACATCCTATTTCCCGCGAT
CACCATTGGCCTGGCTTGTTTCCTCGGTTTCCTGGAAGCGCGCTGGCTGCTGACCAAAGACACGGTCTACCGCACGCTGT
ACCAGTTCTGGGTCAAGATCTTCGCCCTGAATTTCGGCATGGGCGTGGTGTCCGGGCTGGTCATGGCCTATGAGTTCGGC
ACCAACTGGTCGTTCTTCTCGCAATTCGCAGGCGGCATTACCGGCCCGCTGCTGACCTATGAAGTGCTGACCGCCTTCTT
CCTCGAAGCCGGCTTCCTTGGCGTGATGCTGTTCGGCTGGAACCGCGTCGGCCCGGGGCTGCACTTCTTTTCGACGGTGA
TGGTCGCGCTCGGCACCATGATCTCGTCGACATGGATCCTGGCGTCCAACAGCTGGATGCACACGCCCGCAGGCTACGCC
ATCGTGGCTGGCAAGGTCGTGCCGACCGACTGGCTCGCCGTGATCTTCAACCCGTCGTTCCCGTACCGCCTTGCACATAT
GGTGATCGCCGCGTTGCTGTCCACGGCATTGTTCGTGGCGGCAGCGTCAGCGTGGCAACTGCTGCACGGCCGCGCGGTGC
CCGCCGCGAAGAAGATGCTGTCGCTGGCGCTGTGGATGGTGCTTGTCACCGCGCCGTTGCAGGCGGTGGTCGGCGACGCG
CACGGCCTCAATACGCTCGAATACCAGCCCGCCAAGATCGCCGCGCTGGAAGGCCACTGGAACACCGCAGCGAAGGACGA
CAAGAACGGCTTCCCGCTGATCGTCTTCGGCATTCCCGACATGGAACGTGAGGAAACGCGCTACCCGATCGAGATTCCGC
GCCTGGGCAGCGTGATCCTCACGCACACGCTGGATGGGCAGATCCGCGGCCTGAAGGACTTTCCCAAGGCCGACCGACCC
AATGCGACCGTGCTGTTCTTCACCTTCCGCACCATGGTCGGCCTGGGCGTGCTGATGATCCTGTACGGCCTGCTCGGATG
GCTGCTGCGCCGCAACGGCGCCGTGTACCGGTCCCGCGCGTTCCTGCGCTTTGCCGTGGTGATGGGTCCTGCAGGACTGA
TCGCCCTGCTCGCAGGCTGGATGACCACCGAGATCGGACGCCAGCCGTGGGTCGTCTACGGCCTGATGCGCACCCACGAC
GCGGTGTCCGCGCACGCCGCAGGCCCGGTTGCACTGTCGCTAGCGCTGTTCGTCATCGTCTATTTCATCGTCTTCGGCGT
GGGCATCCGCTACATGCTCAGGCTGGCGAGCGCCGGCCCCGTTGCCGACAACCACGTGCACGCCCACCCGCAACCCTATG
GCCCCGGTACTGTCGGCGCCATTCCGGCCGCCGTCAGCGCAGCGGCTTCCGCTCGCACCGCCATGGCTCCCCACGGCCAC
CCCAATTCCTGA

Upstream 100 bases:

>100_bases
ACAACTGTACCCCTCCCCCACAAGCTGTATTCCCTACCCTTCTCCGTAATGTCGCGCGCCCCGCCATCACACCGGCGGCA
ACCCCACGGAGAGCACATCG

Downstream 100 bases:

>100_bases
ACAGGTGAACAACATGGGTATCGACCTCCCCGCCATCTGGGCCTGCCTGATCTTCTTCGGCGTGATGATGTACGTCATCA
TGGATGGATTCGACCTGGGC

Product: cytochrome bd ubiquinol oxidase subunit I

Products: NA

Alternate protein names: Cytochrome d ubiquinol oxidase subunit I [H]

Number of amino acids: Translated: 483; Mature: 483

Protein sequence:

>483_residues
MHGLTALELARIQFGFTVSFHILFPAITIGLACFLGFLEARWLLTKDTVYRTLYQFWVKIFALNFGMGVVSGLVMAYEFG
TNWSFFSQFAGGITGPLLTYEVLTAFFLEAGFLGVMLFGWNRVGPGLHFFSTVMVALGTMISSTWILASNSWMHTPAGYA
IVAGKVVPTDWLAVIFNPSFPYRLAHMVIAALLSTALFVAAASAWQLLHGRAVPAAKKMLSLALWMVLVTAPLQAVVGDA
HGLNTLEYQPAKIAALEGHWNTAAKDDKNGFPLIVFGIPDMEREETRYPIEIPRLGSVILTHTLDGQIRGLKDFPKADRP
NATVLFFTFRTMVGLGVLMILYGLLGWLLRRNGAVYRSRAFLRFAVVMGPAGLIALLAGWMTTEIGRQPWVVYGLMRTHD
AVSAHAAGPVALSLALFVIVYFIVFGVGIRYMLRLASAGPVADNHVHAHPQPYGPGTVGAIPAAVSAAASARTAMAPHGH
PNS

Sequences:

>Translated_483_residues
MHGLTALELARIQFGFTVSFHILFPAITIGLACFLGFLEARWLLTKDTVYRTLYQFWVKIFALNFGMGVVSGLVMAYEFG
TNWSFFSQFAGGITGPLLTYEVLTAFFLEAGFLGVMLFGWNRVGPGLHFFSTVMVALGTMISSTWILASNSWMHTPAGYA
IVAGKVVPTDWLAVIFNPSFPYRLAHMVIAALLSTALFVAAASAWQLLHGRAVPAAKKMLSLALWMVLVTAPLQAVVGDA
HGLNTLEYQPAKIAALEGHWNTAAKDDKNGFPLIVFGIPDMEREETRYPIEIPRLGSVILTHTLDGQIRGLKDFPKADRP
NATVLFFTFRTMVGLGVLMILYGLLGWLLRRNGAVYRSRAFLRFAVVMGPAGLIALLAGWMTTEIGRQPWVVYGLMRTHD
AVSAHAAGPVALSLALFVIVYFIVFGVGIRYMLRLASAGPVADNHVHAHPQPYGPGTVGAIPAAVSAAASARTAMAPHGH
PNS
>Mature_483_residues
MHGLTALELARIQFGFTVSFHILFPAITIGLACFLGFLEARWLLTKDTVYRTLYQFWVKIFALNFGMGVVSGLVMAYEFG
TNWSFFSQFAGGITGPLLTYEVLTAFFLEAGFLGVMLFGWNRVGPGLHFFSTVMVALGTMISSTWILASNSWMHTPAGYA
IVAGKVVPTDWLAVIFNPSFPYRLAHMVIAALLSTALFVAAASAWQLLHGRAVPAAKKMLSLALWMVLVTAPLQAVVGDA
HGLNTLEYQPAKIAALEGHWNTAAKDDKNGFPLIVFGIPDMEREETRYPIEIPRLGSVILTHTLDGQIRGLKDFPKADRP
NATVLFFTFRTMVGLGVLMILYGLLGWLLRRNGAVYRSRAFLRFAVVMGPAGLIALLAGWMTTEIGRQPWVVYGLMRTHD
AVSAHAAGPVALSLALFVIVYFIVFGVGIRYMLRLASAGPVADNHVHAHPQPYGPGTVGAIPAAVSAAASARTAMAPHGH
PNS

Specific function: Cytochrome Oxidase Subunit. [C]

COG id: COG1271

COG function: function code C; Cytochrome bd-type quinol oxidase, subunit 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome ubiquinol oxidase subunit 1 family [H]

Homologues:

Organism=Escherichia coli, GI1787212, Length=501, Percent_Identity=31.3373253493014, Blast_Score=229, Evalue=4e-61,
Organism=Escherichia coli, GI87081779, Length=501, Percent_Identity=28.7425149700599, Blast_Score=217, Evalue=2e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002585 [H]

Pfam domain/function: PF01654 Bac_Ubq_Cox [H]

EC number: 1.10.3.-

Molecular weight: Translated: 52453; Mature: 52453

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHGLTALELARIQFGFTVSFHILFPAITIGLACFLGFLEARWLLTKDTVYRTLYQFWVKI
CCCCHHHHHHHHEECEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FALNFGMGVVSGLVMAYEFGTNWSFFSQFAGGITGPLLTYEVLTAFFLEAGFLGVMLFGW
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
NRVGPGLHFFSTVMVALGTMISSTWILASNSWMHTPAGYAIVAGKVVPTDWLAVIFNPSF
CCCCCHHHHHHHHHHHHHHHHHCCEEEECCCEEECCCCCEEEECCCCCCCEEEEEECCCC
PYRLAHMVIAALLSTALFVAAASAWQLLHGRAVPAAKKMLSLALWMVLVTAPLQAVVGDA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
HGLNTLEYQPAKIAALEGHWNTAAKDDKNGFPLIVFGIPDMEREETRYPIEIPRLGSVIL
CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEECCCCCCEEE
THTLDGQIRGLKDFPKADRPNATVLFFTFRTMVGLGVLMILYGLLGWLLRRNGAVYRSRA
EEECCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
FLRFAVVMGPAGLIALLAGWMTTEIGRQPWVVYGLMRTHDAVSAHAAGPVALSLALFVIV
HHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHH
YFIVFGVGIRYMLRLASAGPVADNHVHAHPQPYGPGTVGAIPAAVSAAASARTAMAPHGH
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
PNS
CCC
>Mature Secondary Structure
MHGLTALELARIQFGFTVSFHILFPAITIGLACFLGFLEARWLLTKDTVYRTLYQFWVKI
CCCCHHHHHHHHEECEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FALNFGMGVVSGLVMAYEFGTNWSFFSQFAGGITGPLLTYEVLTAFFLEAGFLGVMLFGW
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
NRVGPGLHFFSTVMVALGTMISSTWILASNSWMHTPAGYAIVAGKVVPTDWLAVIFNPSF
CCCCCHHHHHHHHHHHHHHHHHCCEEEECCCEEECCCCCEEEECCCCCCCEEEEEECCCC
PYRLAHMVIAALLSTALFVAAASAWQLLHGRAVPAAKKMLSLALWMVLVTAPLQAVVGDA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
HGLNTLEYQPAKIAALEGHWNTAAKDDKNGFPLIVFGIPDMEREETRYPIEIPRLGSVIL
CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEECCCCCCEEE
THTLDGQIRGLKDFPKADRPNATVLFFTFRTMVGLGVLMILYGLLGWLLRRNGAVYRSRA
EEECCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
FLRFAVVMGPAGLIALLAGWMTTEIGRQPWVVYGLMRTHDAVSAHAAGPVALSLALFVIV
HHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHH
YFIVFGVGIRYMLRLASAGPVADNHVHAHPQPYGPGTVGAIPAAVSAAASARTAMAPHGH
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
PNS
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on diphenols and related substances as donors; With oxygen as acceptor [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]