| Definition | Ralstonia eutropha JMP134 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_007348 |
| Length | 2,726,152 |
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The map label for this gene is ilvD [H]
Identifier: 73537783
GI number: 73537783
Start: 582950
End: 584713
Strand: Direct
Name: ilvD [H]
Synonym: Reut_B3950
Alternate gene names: 73537783
Gene position: 582950-584713 (Clockwise)
Preceding gene: 73537781
Following gene: 73537784
Centisome position: 21.38
GC content: 68.59
Gene sequence:
>1764_bases ATGCCTTACGCCGACGACCCCAAGCTGCCCCAGGACGGCGCCGCCCCCACCGAAGGACTTGCCAAGGGCCTCACGAACTA TGGCGACACAGGCTTCTCGCTGTTCCTGCGCAAGGCCTTCATCAAAGGGGCGGGCTTTACTGACGACGCGCTGTCGCGTC CGGTGATCGGCATCGTCAACACGGGCAGCAGCTACAACCCCTGCCACGGCAATGCGCCGCAGCTCGTAGAGGCGGTCAAG CGCGGCGTGATGCTCGCGGGCGGTCTGCCGGTGGATTTCCCGACGATCTCGGTGCACGAGAGCTTCTCCGCGCCGACCAG CATGTACCTGCGCAACCTGATGTCGATGGACACCGAAGAGATGATCCGCGCGCAGCCCATGGACGCCGTGGTGCTGATCG GCGGCTGCGACAAGACGGTGCCGGCGCAGCTGATGGGGGCGGCGTCGGCCGGCGTGCCCGCGATCCAGCTTGTGACCGGA TCGATGCTGACCGGGTCGCATCGCAGCGAACGGGTTGGGGCGTGCACGGACTGCCGCCGCTACTGGGGCCGCTACCGCGC CGAGGAGATTGACAGCGCGGAGATTGCCGACGTCAACAACCAGCTCGTGGCAAGCGTGGGCACGTGTTCGGTAATGGGCA CGGCCAGCACCATGGCGTGTGTTGCCGAAGCGCTGGGCATGATGGTGAGCGGCGGCGCGTCAGCACCCGCGGTGACCGCC GACCGCGTGCGTGTGGCGGAGCGCACCGGTACCACGGCGGTCGGCATGGCCGCCGCCCGGCTGACGCCCGACCGCATCCT GACCGGCAAGGCCTTCGAGAACGCGCTGCGCGTGCTGCTGGCCATCGGCGGATCGACCAACGGCATCGTCCACCTGACGG CGATCGCCGGGCGCCTGGGCATCGACATCGACCTGGCAGGGCTCGATCGCATGAGCCGGGAAACGCCGGTGCTGGTCGAC CTGAAGCCTTCGGGCCAGCACTACATGGAAGACTTCCACAAGGCAGGCGGCATGCTGACACTGCTGCGCGAACTGCGTCC GCTGCTGCATCTCGACACGCTGACCGTGTCAGGCCGCACGCTCGGCGAGGAGCTCGACGCTGCGCCGCCGCTGTTCCCGC AGGACGTGATTCGCAGTGCCGGCAACCCGATCTACCCGGCCGGCGGCCTGGCGGTACTGCGCGGCAACCTGGCACCGGGC GGCGCCATCATCAAGCAGTCGGCCGCCAACCCCGCGCTGATGGAGCACGAAGGGCGTGCGGTGGTGTTCGAGAATGCCGA GGACATGGCACAGCGCATTGACGACGAGTCGCTCGACGTCAAGGCCGACGACATCCTCGTGCTCAAGCGCATCGGGCCGA CCGGCGCGCCGGGCATGCCCGAAGCCGGCTATATGCCGATCCCCAAGAAGCTCGCACGCGCAGGCGTGAAGGACATGGTG CGTGTGTCGGACGGGCGCATGAGCGGTACCGCGGCCGGCACCATCGTGCTGCATGTGACGCCCGAAGCGGCCATCGGCGG GCCGCTGGCGCTTGTGCAGAGCGGCGACCGCATCCGGCTGTCGGTCGCGAACCGTGAGATCGCGCTGCTCGTCGACGACG CCGAGCTGGCCCGCCGCGCTGCCGCGCAGCCAGTCGAACGCCCGCGCGCGGAACGTGGTTATCGCAAGCTGTTCCTCGAG ACCGTGACGCAGGCTGACCAGGGCGTCGATTTCGACTTCTTGCGCGCCGCGCAGACGGTCGATACCGTGCCGAAGCAGGG CTGA
Upstream 100 bases:
>100_bases GCAGATTAATTTGCCGCAAGCACCGCAGCCCTTGCGGCCTGTGGGCAAGCCCCGCTAAGCTTCGCGTCTCGATTATCAAT AATCTTATCGGAGACGCAGA
Downstream 100 bases:
>100_bases GCCATGACTGCGACCACGGCAACGGTCACCGCCATCGACGGCGGCGACGCGATGGAGCAGGCGCTCGACACGCTCGAAGA AGACATCGTCTTCGGCCGCC
Product: dihydroxy-acid dehydratase
Products: NA
Alternate protein names: DAD [H]
Number of amino acids: Translated: 587; Mature: 586
Protein sequence:
>587_residues MPYADDPKLPQDGAAPTEGLAKGLTNYGDTGFSLFLRKAFIKGAGFTDDALSRPVIGIVNTGSSYNPCHGNAPQLVEAVK RGVMLAGGLPVDFPTISVHESFSAPTSMYLRNLMSMDTEEMIRAQPMDAVVLIGGCDKTVPAQLMGAASAGVPAIQLVTG SMLTGSHRSERVGACTDCRRYWGRYRAEEIDSAEIADVNNQLVASVGTCSVMGTASTMACVAEALGMMVSGGASAPAVTA DRVRVAERTGTTAVGMAAARLTPDRILTGKAFENALRVLLAIGGSTNGIVHLTAIAGRLGIDIDLAGLDRMSRETPVLVD LKPSGQHYMEDFHKAGGMLTLLRELRPLLHLDTLTVSGRTLGEELDAAPPLFPQDVIRSAGNPIYPAGGLAVLRGNLAPG GAIIKQSAANPALMEHEGRAVVFENAEDMAQRIDDESLDVKADDILVLKRIGPTGAPGMPEAGYMPIPKKLARAGVKDMV RVSDGRMSGTAAGTIVLHVTPEAAIGGPLALVQSGDRIRLSVANREIALLVDDAELARRAAAQPVERPRAERGYRKLFLE TVTQADQGVDFDFLRAAQTVDTVPKQG
Sequences:
>Translated_587_residues MPYADDPKLPQDGAAPTEGLAKGLTNYGDTGFSLFLRKAFIKGAGFTDDALSRPVIGIVNTGSSYNPCHGNAPQLVEAVK RGVMLAGGLPVDFPTISVHESFSAPTSMYLRNLMSMDTEEMIRAQPMDAVVLIGGCDKTVPAQLMGAASAGVPAIQLVTG SMLTGSHRSERVGACTDCRRYWGRYRAEEIDSAEIADVNNQLVASVGTCSVMGTASTMACVAEALGMMVSGGASAPAVTA DRVRVAERTGTTAVGMAAARLTPDRILTGKAFENALRVLLAIGGSTNGIVHLTAIAGRLGIDIDLAGLDRMSRETPVLVD LKPSGQHYMEDFHKAGGMLTLLRELRPLLHLDTLTVSGRTLGEELDAAPPLFPQDVIRSAGNPIYPAGGLAVLRGNLAPG GAIIKQSAANPALMEHEGRAVVFENAEDMAQRIDDESLDVKADDILVLKRIGPTGAPGMPEAGYMPIPKKLARAGVKDMV RVSDGRMSGTAAGTIVLHVTPEAAIGGPLALVQSGDRIRLSVANREIALLVDDAELARRAAAQPVERPRAERGYRKLFLE TVTQADQGVDFDFLRAAQTVDTVPKQG >Mature_586_residues PYADDPKLPQDGAAPTEGLAKGLTNYGDTGFSLFLRKAFIKGAGFTDDALSRPVIGIVNTGSSYNPCHGNAPQLVEAVKR GVMLAGGLPVDFPTISVHESFSAPTSMYLRNLMSMDTEEMIRAQPMDAVVLIGGCDKTVPAQLMGAASAGVPAIQLVTGS MLTGSHRSERVGACTDCRRYWGRYRAEEIDSAEIADVNNQLVASVGTCSVMGTASTMACVAEALGMMVSGGASAPAVTAD RVRVAERTGTTAVGMAAARLTPDRILTGKAFENALRVLLAIGGSTNGIVHLTAIAGRLGIDIDLAGLDRMSRETPVLVDL KPSGQHYMEDFHKAGGMLTLLRELRPLLHLDTLTVSGRTLGEELDAAPPLFPQDVIRSAGNPIYPAGGLAVLRGNLAPGG AIIKQSAANPALMEHEGRAVVFENAEDMAQRIDDESLDVKADDILVLKRIGPTGAPGMPEAGYMPIPKKLARAGVKDMVR VSDGRMSGTAAGTIVLHVTPEAAIGGPLALVQSGDRIRLSVANREIALLVDDAELARRAAAQPVERPRAERGYRKLFLET VTQADQGVDFDFLRAAQTVDTVPKQG
Specific function: Valine and isoleucine biosynthesis; fourth step. [C]
COG id: COG0129
COG function: function code EG; Dihydroxyacid dehydratase/phosphogluconate dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ilvD/edd family [H]
Homologues:
Organism=Escherichia coli, GI48994964, Length=597, Percent_Identity=30.9882747068677, Blast_Score=241, Evalue=8e-65, Organism=Escherichia coli, GI1788157, Length=492, Percent_Identity=33.3333333333333, Blast_Score=168, Evalue=9e-43, Organism=Escherichia coli, GI2367371, Length=452, Percent_Identity=31.6371681415929, Blast_Score=158, Evalue=7e-40, Organism=Escherichia coli, GI1786464, Length=503, Percent_Identity=29.8210735586481, Blast_Score=152, Evalue=4e-38, Organism=Saccharomyces cerevisiae, GI6322476, Length=549, Percent_Identity=32.2404371584699, Blast_Score=273, Evalue=5e-74,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015928 - InterPro: IPR004404 - InterPro: IPR000581 - InterPro: IPR020558 [H]
Pfam domain/function: PF00920 ILVD_EDD [H]
EC number: =4.2.1.9 [H]
Molecular weight: Translated: 61738; Mature: 61606
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: PS00886 ILVD_EDD_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYADDPKLPQDGAAPTEGLAKGLTNYGDTGFSLFLRKAFIKGAGFTDDALSRPVIGIVN CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHCCCEEEEEE TGSSYNPCHGNAPQLVEAVKRGVMLAGGLPVDFPTISVHESFSAPTSMYLRNLMSMDTEE CCCCCCCCCCCHHHHHHHHHCCEEEECCCCCCCCEEEECCCCCCCHHHHHHHHHCCCHHH MIRAQPMDAVVLIGGCDKTVPAQLMGAASAGVPAIQLVTGSMLTGSHRSERVGACTDCRR HHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCCEEEEEECCHHCCCCCCCCCCCHHHHHH YWGRYRAEEIDSAEIADVNNQLVASVGTCSVMGTASTMACVAEALGMMVSGGASAPAVTA HHHHHHHHHCCCCHHHCCCCHHHHHCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCH DRVRVAERTGTTAVGMAAARLTPDRILTGKAFENALRVLLAIGGSTNGIVHLTAIAGRLG HHHHHHHHCCCHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC IDIDLAGLDRMSRETPVLVDLKPSGQHYMEDFHKAGGMLTLLRELRPLLHLDTLTVSGRT CEEEECCCHHCCCCCCEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEECCCH LGEELDAAPPLFPQDVIRSAGNPIYPAGGLAVLRGNLAPGGAIIKQSAANPALMEHEGRA HHHHHCCCCCCCHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHCCCCCCCEECCCCE VVFENAEDMAQRIDDESLDVKADDILVLKRIGPTGAPGMPEAGYMPIPKKLARAGVKDMV EEECCHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHCCHHHHH RVSDGRMSGTAAGTIVLHVTPEAAIGGPLALVQSGDRIRLSVANREIALLVDDAELARRA HHCCCCCCCCEEEEEEEEECCCCCCCCCEEEEECCCEEEEEECCCEEEEEECCHHHHHHH AAQPVERPRAERGYRKLFLETVTQADQGVDFDFLRAAQTVDTVPKQG HCCCHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure PYADDPKLPQDGAAPTEGLAKGLTNYGDTGFSLFLRKAFIKGAGFTDDALSRPVIGIVN CCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHCCCEEEEEE TGSSYNPCHGNAPQLVEAVKRGVMLAGGLPVDFPTISVHESFSAPTSMYLRNLMSMDTEE CCCCCCCCCCCHHHHHHHHHCCEEEECCCCCCCCEEEECCCCCCCHHHHHHHHHCCCHHH MIRAQPMDAVVLIGGCDKTVPAQLMGAASAGVPAIQLVTGSMLTGSHRSERVGACTDCRR HHHCCCCCEEEEEECCCCCCHHHHHHHHCCCCCEEEEEECCHHCCCCCCCCCCCHHHHHH YWGRYRAEEIDSAEIADVNNQLVASVGTCSVMGTASTMACVAEALGMMVSGGASAPAVTA HHHHHHHHHCCCCHHHCCCCHHHHHCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCH DRVRVAERTGTTAVGMAAARLTPDRILTGKAFENALRVLLAIGGSTNGIVHLTAIAGRLG HHHHHHHHCCCHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC IDIDLAGLDRMSRETPVLVDLKPSGQHYMEDFHKAGGMLTLLRELRPLLHLDTLTVSGRT CEEEECCCHHCCCCCCEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEECCCH LGEELDAAPPLFPQDVIRSAGNPIYPAGGLAVLRGNLAPGGAIIKQSAANPALMEHEGRA HHHHHCCCCCCCHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHCCCCCCCEECCCCE VVFENAEDMAQRIDDESLDVKADDILVLKRIGPTGAPGMPEAGYMPIPKKLARAGVKDMV EEECCHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHCCHHHHH RVSDGRMSGTAAGTIVLHVTPEAAIGGPLALVQSGDRIRLSVANREIALLVDDAELARRA HHCCCCCCCCEEEEEEEEECCCCCCCCCEEEEECCCEEEEEECCCEEEEEECCHHHHHHH AAQPVERPRAERGYRKLFLETVTQADQGVDFDFLRAAQTVDTVPKQG HCCCHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA