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The map label for this gene is ndoA [H]

Identifier: 73537613

GI number: 73537613

Start: 379776

End: 380081

Strand: Reverse

Name: ndoA [H]

Synonym: Reut_B3778

Alternate gene names: 73537613

Gene position: 380081-379776 (Counterclockwise)

Preceding gene: 73537614

Following gene: 73537612

Centisome position: 13.94

GC content: 61.76

Gene sequence:

>306_bases
ATGGCATGGATTGAAATCGACAACGTCGGCACGCTGCAGAACGACGAAGTGATGCCGCTCAACCTCGGTGAACGCCAGCT
GGCCGTCTACCGTAGCGACGACGAGTACTTCGTCACCGACAACGTCTGCACGCACCAGTACGCGCTGCTGTCCGACGGCT
ACCTGGAAGATGGCTGCATCGAATGCCCATTGCACCAGGGCCGCTTCGACATCCGCACCGGCAAGGCCATGTGCGCGCCA
GCCAGCACCGACATCCGCACCTACCCGGTCAAGTTCGAAGACAGGCGGGTGTGGGTCGAGCTGTGA

Upstream 100 bases:

>100_bases
CCGGCACCGGACAGGGTTAACGCGGATAGTTCCCACATAAAACATCAGTACACTGACCGTTATAGTCAGTGTACTGACAG
ATAAGTAACGGAGAACCTCC

Downstream 100 bases:

>100_bases
CGAGGCAGTACATGTCAACGCAAACCCCCATCCTTATCATCGGCGCTGGCCAGGCCGGTGCCATGGCCGCAGCGGAGTTG
CGCAAGCTGGGCCATGCCGA

Product: Rieske (2Fe-2S) domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 100

Protein sequence:

>101_residues
MAWIEIDNVGTLQNDEVMPLNLGERQLAVYRSDDEYFVTDNVCTHQYALLSDGYLEDGCIECPLHQGRFDIRTGKAMCAP
ASTDIRTYPVKFEDRRVWVEL

Sequences:

>Translated_101_residues
MAWIEIDNVGTLQNDEVMPLNLGERQLAVYRSDDEYFVTDNVCTHQYALLSDGYLEDGCIECPLHQGRFDIRTGKAMCAP
ASTDIRTYPVKFEDRRVWVEL
>Mature_100_residues
AWIEIDNVGTLQNDEVMPLNLGERQLAVYRSDDEYFVTDNVCTHQYALLSDGYLEDGCIECPLHQGRFDIRTGKAMCAPA
STDIRTYPVKFEDRRVWVEL

Specific function: Component of naphthalene dioxygenase (NDO) multicomponent enzyme system which catalyzes the incorporation of both atoms of molecular oxygen into naphthalene to form cis- naphthalene dihydrodiol. This subunit is a 2Fe-2S ferredoxin that transfers electrons

COG id: COG2146

COG function: function code PR; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1788890, Length=76, Percent_Identity=39.4736842105263, Blast_Score=71, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: NA

Molecular weight: Translated: 11633; Mature: 11502

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAWIEIDNVGTLQNDEVMPLNLGERQLAVYRSDDEYFVTDNVCTHQYALLSDGYLEDGCI
CEEEEECCCCCCCCCCEEEEECCCEEEEEEECCCCEEEECCCCCCEEEEECCCCCCCCEE
ECPLHQGRFDIRTGKAMCAPASTDIRTYPVKFEDRRVWVEL
ECCCCCCEEEEECCCEEECCCCCCCEEECEEECCCEEEEEC
>Mature Secondary Structure 
AWIEIDNVGTLQNDEVMPLNLGERQLAVYRSDDEYFVTDNVCTHQYALLSDGYLEDGCI
EEEEECCCCCCCCCCEEEEECCCEEEEEEECCCCEEEECCCCCCEEEEECCCCCCCCEE
ECPLHQGRFDIRTGKAMCAPASTDIRTYPVKFEDRRVWVEL
ECCCCCCEEEEECCCEEECCCCCCCEEECEEECCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA