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The map label for this gene is ynfA [C]

Identifier: 73537514

GI number: 73537514

Start: 260788

End: 261105

Strand: Reverse

Name: ynfA [C]

Synonym: Reut_B3679

Alternate gene names: 73537514

Gene position: 261105-260788 (Counterclockwise)

Preceding gene: 73537516

Following gene: 73537513

Centisome position: 9.58

GC content: 67.92

Gene sequence:

>318_bases
ATGAACACCATCGCGCTCTACCTGCTCACCGCCGTCGCCGAAATCCTCGGCTGCTACCTGCCTTACCTGTGGCTGCGCCA
GGGTGCGAGCGCGTGGGTGCTGCTGCCGGGCGCGCTGTCGCTGGCGTTGTTCGCATGGCTGCTGTCGTTGCATCCGGACG
CTTCGGGTCGCGTGTATGCGGCCTATGGCGGCGTCTATATCGGCGTGGCCGTGCTGTGGCTGTGGCTCGTCGATGGCGTG
CGGCCCAGCGCCTGGGATCTCGCCGGCGTGGGCGTGGCGTTCGGGGGCATGGCCATCATCGTGTTCCAGCCACGCTGA

Upstream 100 bases:

>100_bases
CACGGCCAGACGGGGACACGCGTGCCCGTATACTGCGCGATTGATCCTCCAGCCCCCGCCACTACCCAGTGCGGCACCTG
ACCCGAGACCACACTGCCGC

Downstream 100 bases:

>100_bases
AGGCGTGCGCCAGCGCGGCAACTGTTCCGTTTTGCCACAGTTGCGCCGACACGGAACAATCGGTCCGGCCGCGCGATACA
CGTGAGATAGGGGCGTAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MNTIALYLLTAVAEILGCYLPYLWLRQGASAWVLLPGALSLALFAWLLSLHPDASGRVYAAYGGVYIGVAVLWLWLVDGV
RPSAWDLAGVGVAFGGMAIIVFQPR

Sequences:

>Translated_105_residues
MNTIALYLLTAVAEILGCYLPYLWLRQGASAWVLLPGALSLALFAWLLSLHPDASGRVYAAYGGVYIGVAVLWLWLVDGV
RPSAWDLAGVGVAFGGMAIIVFQPR
>Mature_105_residues
MNTIALYLLTAVAEILGCYLPYLWLRQGASAWVLLPGALSLALFAWLLSLHPDASGRVYAAYGGVYIGVAVLWLWLVDGV
RPSAWDLAGVGVAFGGMAIIVFQPR

Specific function: Unknown

COG id: COG1742

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0060 family

Homologues:

Organism=Escherichia coli, GI1787865, Length=101, Percent_Identity=57.4257425742574, Blast_Score=117, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3679_CUPPJ (Q46UZ7)

Other databases:

- EMBL:   CP000091
- RefSeq:   YP_297881.1
- GeneID:   3614100
- GenomeReviews:   CP000091_GR
- KEGG:   reu:Reut_B3679
- NMPDR:   fig|264198.3.peg.4299
- HOGENOM:   HBG313568
- OMA:   MAILWLW
- ProtClustDB:   PRK02237
- BioCyc:   REUT264198:REUT_B3679-MONOMER
- HAMAP:   MF_00010
- InterPro:   IPR003844

Pfam domain/function: PF02694 UPF0060

EC number: NA

Molecular weight: Translated: 11279; Mature: 11279

Theoretical pI: Translated: 7.33; Mature: 7.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x14683abc)-; HASH(0x17148b7c)-; HASH(0x17028538)-; HASH(0x15e3a7fc)-;

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTIALYLLTAVAEILGCYLPYLWLRQGASAWVLLPGALSLALFAWLLSLHPDASGRVYA
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHCCCCCCCEEEE
AYGGVYIGVAVLWLWLVDGVRPSAWDLAGVGVAFGGMAIIVFQPR
ECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEEEEECH
>Mature Secondary Structure
MNTIALYLLTAVAEILGCYLPYLWLRQGASAWVLLPGALSLALFAWLLSLHPDASGRVYA
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHCCCCCCCEEEE
AYGGVYIGVAVLWLWLVDGVRPSAWDLAGVGVAFGGMAIIVFQPR
ECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEEEEECH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA