Click here to switch to the map view.

The map label for this gene is yidD [C]

Identifier: 73543143

GI number: 73543143

Start: 3805006

End: 3805302

Strand: Reverse

Name: yidD [C]

Synonym: Reut_A3461

Alternate gene names: 73543143

Gene position: 3805302-3805006 (Counterclockwise)

Preceding gene: 73543144

Following gene: 73543142

Centisome position: 99.97

GC content: 65.66

Gene sequence:

>297_bases
ATGAAGCGAATCCTGCTAGCCCTGCTGCGCATCTACAAGATCGCTCTGAGCCCGTACCTGGGCTCGCGGTGCCGCTTCTG
GCCGACCTGTTCCGACTACGCCCGCGAGGCCGTCATCCAGCATGGCGCCGCGCGCGGCAGCTGGATGGCCGCCTGCCGGC
TGTGCCGTTGCCACCCTTTCACACAAGGCGGGTATGATCCCGTGCCGGGTGTGGAAACGGAAACTGCACAAACGGGCAAA
TTTGCCCATCCCGCGGCAGGCCATGGGCCTGTCACCGTCCGTCTCCCACGACCCTGA

Upstream 100 bases:

>100_bases
TGGAAGTCGCCGCCAAGCCGTTGCCGCCGCCTCCGCCACCGCCGTCACCATCGGCCGCGCCAGAACAGCCCAAGGGCCTT
CCGGCCCGACCGCCCCAGCC

Downstream 100 bases:

>100_bases
TTTCCCCGACCACAGCGAGACATGGATATCAAACGCACCATCCTCTGGGTCATCTTCTCGATGTCCCTCGTGCTGCTCTA
TGACAACTGGCAGCGCGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MKRILLALLRIYKIALSPYLGSRCRFWPTCSDYAREAVIQHGAARGSWMAACRLCRCHPFTQGGYDPVPGVETETAQTGK
FAHPAAGHGPVTVRLPRP

Sequences:

>Translated_98_residues
MKRILLALLRIYKIALSPYLGSRCRFWPTCSDYAREAVIQHGAARGSWMAACRLCRCHPFTQGGYDPVPGVETETAQTGK
FAHPAAGHGPVTVRLPRP
>Mature_98_residues
MKRILLALLRIYKIALSPYLGSRCRFWPTCSDYAREAVIQHGAARGSWMAACRLCRCHPFTQGGYDPVPGVETETAQTGK
FAHPAAGHGPVTVRLPRP

Specific function: Unknown

COG id: COG0759

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0161 family

Homologues:

Organism=Escherichia coli, GI87082322, Length=76, Percent_Identity=46.0526315789474, Blast_Score=79, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3461_CUPPJ (Q46VL5)

Other databases:

- EMBL:   CP000090
- RefSeq:   YP_297663.1
- GeneID:   3611555
- GenomeReviews:   CP000090_GR
- KEGG:   reu:Reut_A3461
- NMPDR:   fig|264198.3.peg.3948
- HOGENOM:   HBG634291
- OMA:   HPERYED
- ProtClustDB:   PRK00041
- BioCyc:   REUT264198:REUT_A3461-MONOMER
- HAMAP:   MF_00386
- InterPro:   IPR002696
- ProDom:   PD004225
- TIGRFAMs:   TIGR00278

Pfam domain/function: PF01809 DUF37

EC number: NA

Molecular weight: Translated: 10809; Mature: 10809

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
5.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRILLALLRIYKIALSPYLGSRCRFWPTCSDYAREAVIQHGAARGSWMAACRLCRCHPF
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC
TQGGYDPVPGVETETAQTGKFAHPAAGHGPVTVRLPRP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
>Mature Secondary Structure
MKRILLALLRIYKIALSPYLGSRCRFWPTCSDYAREAVIQHGAARGSWMAACRLCRCHPF
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC
TQGGYDPVPGVETETAQTGKFAHPAAGHGPVTVRLPRP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA