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The map label for this gene is oxaA [H]

Identifier: 73543142

GI number: 73543142

Start: 3803317

End: 3804984

Strand: Reverse

Name: oxaA [H]

Synonym: Reut_A3460

Alternate gene names: 73543142

Gene position: 3804984-3803317 (Counterclockwise)

Preceding gene: 73543143

Following gene: 73543141

Centisome position: 99.96

GC content: 64.57

Gene sequence:

>1668_bases
ATGGATATCAAACGCACCATCCTCTGGGTCATCTTCTCGATGTCCCTCGTGCTGCTCTATGACAACTGGCAGCGCGCCAA
CGGCCACGCGTCGATGTTCTTCCCGAGCGCGACGCAGCAGCAGGCCGCTTCGGCGCCCGCCGCCAGCGCCGCTCAGGGCG
ATGTGCCCAAGGCCAACGCGACCGCAGGCGCCGCCGCTCCGGCAGCCCCCGGTGGCGCACCTCAGGCAGCCGCACAGCCC
ACCGGCGAAAAGATCATCGTGACCACCGACGAGGTGCGCGCCGAGATCGACACCGCCGGCGGCATCCTGTCGCGCCTGGA
GCTGCTCAACGAGCATGAGAAGGACGGCAAGCCCGTGGTGCTGTTCGAGCGCGATACCACGCGCACGTACATGGCCCGCT
CCGGCCTGATCGGCGGCGACCTGCCGAACCACACCACCGTGTTCACGGCCACCCCTGGCCCGCGCACGCTGGACGGTGCC
GACAAGCTCGAAGTCACGCTGACCGCCGACAAGAACGGCGTGAAGTTTGTGAAGACTTACGTGTTCCACAAGGGCAGCTA
CGTGGTCGACGCGCGCTTTGCCGTGACCAACGATGGCACCGCCCCGGTCTCGCCGACGCTGTACATGGAACTGGCGCGTG
ACGGCAGCAAGGTGGAGCAGTCGCAGTTCTACAGCACCTTCACCGGCCCGGCCATCTACACGGACGCGGACAAGTACCAC
AAGATCACCTTCGACGACATTGCCAAGGGCAAGGCCAGCACGCCGGCCGCTACCACCAGTGGCTGGGTCGCGATGGTGCA
GCACTACTTTGCCTCGGCCTGGATTCCGCAAGCCGGCAAGGAGCACAGCTTCTACGTCCAGCAGATCGACCCGAACCTGT
ACCGCGTGGGCATCCAGCAGCCGCTGGGCCAGATCGCCCCGGGTGCTACGGTGACGACCGATGCGCGCCTGTTCGCGGGC
CCGCAGGAAGAGCGCATGCTCGAGAAGATCACCCCGGGCCTGGAGCTGGTGAAGGACTATGGCTGGCTGACCATCCTAGC
CAAGCCGCTGTTCTGGCTGCTCGAGAAGCTGCACGGCTTCCTGAACAACTGGGGCTGGTCGATCATCGCGCTGACCGTGC
TGATCAAGCTGGTGTTCTTCCCGCTGTCGGCGGCGAGCTACAAGTCCATGGGCAAGATGAAGGACCTGCAGCCGCGCATG
ACGTCGATCCGCGAACGCCACAAGGGCGATCCGCAGAAGATGAACGCGGAGATGATGGCGCTGTACAAGACCGAGAAGGT
CAACCCGCTCGGCGGCTGCCTGCCCATCGTGATCCAGATCCCGGTGTTCATCGCGCTGTACTGGGTGCTGCTGTCGTCGG
TGGAAATGCGCGGCGCGCCGTGGCTGGGCTGGATCCATGACCTGTCGGTGCCGGATCCGTTCTACATCCTGCCGATCGTG
ATGGCCGTGTCGATGTTCGTGCAGACCAGGCTGAACCCGACCCCGCCGGACCCCGTGCAGGCCAAGGTCATGATGATCAT
GCCGCTGGTGTTCTCGTTCATGTTCTTCTTCTTCCCGGCCGGCCTGGTGCTGTACTGGGTTGTGAACAACATCCTGTCGA
TCGCCCAGCAGTGGCAGATCAACCGGATGCTCGGCAAGGGCAAGACCGCTGCGGTCGCCAAGAGCTGA

Upstream 100 bases:

>100_bases
GGAAACTGCACAAACGGGCAAATTTGCCCATCCCGCGGCAGGCCATGGGCCTGTCACCGTCCGTCTCCCACGACCCTGAT
TTCCCCGACCACAGCGAGAC

Downstream 100 bases:

>100_bases
GCGCGAGAGATGCTGAAGGTTTAGTGAAAGCCCGGTGGAGACACCGGGCTTTTTTTGTATCGGCTGCATGCCGGTACGCA
GTGTTCCAAGGAGATGTCGA

Product: putative inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 555; Mature: 555

Protein sequence:

>555_residues
MDIKRTILWVIFSMSLVLLYDNWQRANGHASMFFPSATQQQAASAPAASAAQGDVPKANATAGAAAPAAPGGAPQAAAQP
TGEKIIVTTDEVRAEIDTAGGILSRLELLNEHEKDGKPVVLFERDTTRTYMARSGLIGGDLPNHTTVFTATPGPRTLDGA
DKLEVTLTADKNGVKFVKTYVFHKGSYVVDARFAVTNDGTAPVSPTLYMELARDGSKVEQSQFYSTFTGPAIYTDADKYH
KITFDDIAKGKASTPAATTSGWVAMVQHYFASAWIPQAGKEHSFYVQQIDPNLYRVGIQQPLGQIAPGATVTTDARLFAG
PQEERMLEKITPGLELVKDYGWLTILAKPLFWLLEKLHGFLNNWGWSIIALTVLIKLVFFPLSAASYKSMGKMKDLQPRM
TSIRERHKGDPQKMNAEMMALYKTEKVNPLGGCLPIVIQIPVFIALYWVLLSSVEMRGAPWLGWIHDLSVPDPFYILPIV
MAVSMFVQTRLNPTPPDPVQAKVMMIMPLVFSFMFFFFPAGLVLYWVVNNILSIAQQWQINRMLGKGKTAAVAKS

Sequences:

>Translated_555_residues
MDIKRTILWVIFSMSLVLLYDNWQRANGHASMFFPSATQQQAASAPAASAAQGDVPKANATAGAAAPAAPGGAPQAAAQP
TGEKIIVTTDEVRAEIDTAGGILSRLELLNEHEKDGKPVVLFERDTTRTYMARSGLIGGDLPNHTTVFTATPGPRTLDGA
DKLEVTLTADKNGVKFVKTYVFHKGSYVVDARFAVTNDGTAPVSPTLYMELARDGSKVEQSQFYSTFTGPAIYTDADKYH
KITFDDIAKGKASTPAATTSGWVAMVQHYFASAWIPQAGKEHSFYVQQIDPNLYRVGIQQPLGQIAPGATVTTDARLFAG
PQEERMLEKITPGLELVKDYGWLTILAKPLFWLLEKLHGFLNNWGWSIIALTVLIKLVFFPLSAASYKSMGKMKDLQPRM
TSIRERHKGDPQKMNAEMMALYKTEKVNPLGGCLPIVIQIPVFIALYWVLLSSVEMRGAPWLGWIHDLSVPDPFYILPIV
MAVSMFVQTRLNPTPPDPVQAKVMMIMPLVFSFMFFFFPAGLVLYWVVNNILSIAQQWQINRMLGKGKTAAVAKS
>Mature_555_residues
MDIKRTILWVIFSMSLVLLYDNWQRANGHASMFFPSATQQQAASAPAASAAQGDVPKANATAGAAAPAAPGGAPQAAAQP
TGEKIIVTTDEVRAEIDTAGGILSRLELLNEHEKDGKPVVLFERDTTRTYMARSGLIGGDLPNHTTVFTATPGPRTLDGA
DKLEVTLTADKNGVKFVKTYVFHKGSYVVDARFAVTNDGTAPVSPTLYMELARDGSKVEQSQFYSTFTGPAIYTDADKYH
KITFDDIAKGKASTPAATTSGWVAMVQHYFASAWIPQAGKEHSFYVQQIDPNLYRVGIQQPLGQIAPGATVTTDARLFAG
PQEERMLEKITPGLELVKDYGWLTILAKPLFWLLEKLHGFLNNWGWSIIALTVLIKLVFFPLSAASYKSMGKMKDLQPRM
TSIRERHKGDPQKMNAEMMALYKTEKVNPLGGCLPIVIQIPVFIALYWVLLSSVEMRGAPWLGWIHDLSVPDPFYILPIV
MAVSMFVQTRLNPTPPDPVQAKVMMIMPLVFSFMFFFFPAGLVLYWVVNNILSIAQQWQINRMLGKGKTAAVAKS

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790140, Length=501, Percent_Identity=39.7205588822355, Blast_Score=356, Evalue=2e-99,
Organism=Drosophila melanogaster, GI24662345, Length=207, Percent_Identity=28.9855072463768, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI21356443, Length=207, Percent_Identity=28.9855072463768, Blast_Score=75, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019998
- InterPro:   IPR001708 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 61039; Mature: 61039

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIKRTILWVIFSMSLVLLYDNWQRANGHASMFFPSATQQQAASAPAASAAQGDVPKANA
CCHHHHHHHHHHHHHHHEEECCCCCCCCCEEEECCCCHHHHHHCCCCCCCCCCCCCCCCC
TAGAAAPAAPGGAPQAAAQPTGEKIIVTTDEVRAEIDTAGGILSRLELLNEHEKDGKPVV
CCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
LFERDTTRTYMARSGLIGGDLPNHTTVFTATPGPRTLDGADKLEVTLTADKNGVKFVKTY
EEECCCCHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCHHHHHHH
VFHKGSYVVDARFAVTNDGTAPVSPTLYMELARDGSKVEQSQFYSTFTGPAIYTDADKYH
HEECCCEEEEEEEEEECCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCEEEECCCHHE
KITFDDIAKGKASTPAATTSGWVAMVQHYFASAWIPQAGKEHSFYVQQIDPNLYRVGIQQ
ECCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEECHHH
PLGQIAPGATVTTDARLFAGPQEERMLEKITPGLELVKDYGWLTILAKPLFWLLEKLHGF
HHHHCCCCCEEECCCHHCCCCHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHH
LNNWGWSIIALTVLIKLVFFPLSAASYKSMGKMKDLQPRMTSIRERHKGDPQKMNAEMMA
HHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHCHHHHH
LYKTEKVNPLGGCLPIVIQIPVFIALYWVLLSSVEMRGAPWLGWIHDLSVPDPFYILPIV
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHH
MAVSMFVQTRLNPTPPDPVQAKVMMIMPLVFSFMFFFFPAGLVLYWVVNNILSIAQQWQI
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NRMLGKGKTAAVAKS
HHHHCCCCCCCCCCC
>Mature Secondary Structure
MDIKRTILWVIFSMSLVLLYDNWQRANGHASMFFPSATQQQAASAPAASAAQGDVPKANA
CCHHHHHHHHHHHHHHHEEECCCCCCCCCEEEECCCCHHHHHHCCCCCCCCCCCCCCCCC
TAGAAAPAAPGGAPQAAAQPTGEKIIVTTDEVRAEIDTAGGILSRLELLNEHEKDGKPVV
CCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
LFERDTTRTYMARSGLIGGDLPNHTTVFTATPGPRTLDGADKLEVTLTADKNGVKFVKTY
EEECCCCHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCHHHHHHH
VFHKGSYVVDARFAVTNDGTAPVSPTLYMELARDGSKVEQSQFYSTFTGPAIYTDADKYH
HEECCCEEEEEEEEEECCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCEEEECCCHHE
KITFDDIAKGKASTPAATTSGWVAMVQHYFASAWIPQAGKEHSFYVQQIDPNLYRVGIQQ
ECCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEECHHH
PLGQIAPGATVTTDARLFAGPQEERMLEKITPGLELVKDYGWLTILAKPLFWLLEKLHGF
HHHHCCCCCEEECCCHHCCCCHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHH
LNNWGWSIIALTVLIKLVFFPLSAASYKSMGKMKDLQPRMTSIRERHKGDPQKMNAEMMA
HHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHCHHHHH
LYKTEKVNPLGGCLPIVIQIPVFIALYWVLLSSVEMRGAPWLGWIHDLSVPDPFYILPIV
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHH
MAVSMFVQTRLNPTPPDPVQAKVMMIMPLVFSFMFFFFPAGLVLYWVVNNILSIAQQWQI
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NRMLGKGKTAAVAKS
HHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA