| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is yihX [C]
Identifier: 73543135
GI number: 73543135
Start: 3797934
End: 3798548
Strand: Direct
Name: yihX [C]
Synonym: Reut_A3453
Alternate gene names: 73543135
Gene position: 3797934-3798548 (Clockwise)
Preceding gene: 73543131
Following gene: 73543136
Centisome position: 99.77
GC content: 63.74
Gene sequence:
>615_bases ATGACCGCATCGATCTCGCTCGTCCTGTTCGACATGGAAGGGGTACTGACCCACTATGACCGCGCCACGCGCGCAGAGCA TCTCGCCGCGTCTACCGGGCGGTCAACGGAGCAGGTACGGCACGCGATCTGGGGATCGGGGCTGGAAGCGCGCGCCGATG CCGGCGAGATCAGCGATGACGAGTACCTGCAGGCACTCGGGCAACTGCTGGGGTGCCGTGTCAGCCGGGACGACTGGCTG GCCTCACGCCGCGCATCCATCACGCCCAATGCCGAAACACTGGCACTGGCCGCCAGGCTGGCCGGCCCATACCGCATCGC AATCCTGACCAACAACTGCAGGCTGGTCACGGACCATATCGCTTACCTGAATCCGCCGGTCGCGCAGTTGTTCGGGCAGA ACGTTTATCCCTCTGCAGCGTTTGGAGCGACCAAGCCGGCTGCGCAGGCTTATCTGGGGTGCATTGGGCAGCTTGGATGC TGTGCGGCGCAGACGTTGTTCATCGATGACACGGCGGCCAATGTGCAGGGAGCGGTTGATGCCGGGCTGCACGGGTACCG GTTCGTGAATGCTAAATCCCTGGCGGCGGAGTTTGCGTCGAGGTCGTTGATCTAG
Upstream 100 bases:
>100_bases CCCGCACGCCAAAGGTGAGCCGGGGCTCGAGGGTTTTCCGCCAGCGGCCTCGCGGCCCATGCACAATCAGGGCTTCTGGC CATCCACCGGGACAGACGCC
Downstream 100 bases:
>100_bases CCCAATTTGACCCCAATAGGATGCGATTACGAATCTAGTGCTTTCACTATTGTAGAATGCTTTCATTGAAGTCAAATTGG AGCAATGACTGCAATGGCAA
Product: HAD family hydrolase
Products: NA
Alternate protein names: HAD-Superfamily Hydrolase; HAD Family Hydrolase; HAD Superfamily Hydrolase; Haloacid Dehalogenase Hydrolase Protein; HAD Family Phosphatase
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MTASISLVLFDMEGVLTHYDRATRAEHLAASTGRSTEQVRHAIWGSGLEARADAGEISDDEYLQALGQLLGCRVSRDDWL ASRRASITPNAETLALAARLAGPYRIAILTNNCRLVTDHIAYLNPPVAQLFGQNVYPSAAFGATKPAAQAYLGCIGQLGC CAAQTLFIDDTAANVQGAVDAGLHGYRFVNAKSLAAEFASRSLI
Sequences:
>Translated_204_residues MTASISLVLFDMEGVLTHYDRATRAEHLAASTGRSTEQVRHAIWGSGLEARADAGEISDDEYLQALGQLLGCRVSRDDWL ASRRASITPNAETLALAARLAGPYRIAILTNNCRLVTDHIAYLNPPVAQLFGQNVYPSAAFGATKPAAQAYLGCIGQLGC CAAQTLFIDDTAANVQGAVDAGLHGYRFVNAKSLAAEFASRSLI >Mature_203_residues TASISLVLFDMEGVLTHYDRATRAEHLAASTGRSTEQVRHAIWGSGLEARADAGEISDDEYLQALGQLLGCRVSRDDWLA SRRASITPNAETLALAARLAGPYRIAILTNNCRLVTDHIAYLNPPVAQLFGQNVYPSAAFGATKPAAQAYLGCIGQLGCC AAQTLFIDDTAANVQGAVDAGLHGYRFVNAKSLAAEFASRSLI
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21699; Mature: 21567
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASISLVLFDMEGVLTHYDRATRAEHLAASTGRSTEQVRHAIWGSGLEARADAGEISDD CCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCH EYLQALGQLLGCRVSRDDWLASRRASITPNAETLALAARLAGPYRIAILTNNCRLVTDHI HHHHHHHHHHCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCEEEEHHH AYLNPPVAQLFGQNVYPSAAFGATKPAAQAYLGCIGQLGCCAAQTLFIDDTAANVQGAVD HHCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHH AGLHGYRFVNAKSLAAEFASRSLI CCCCCEEEECHHHHHHHHHHCCCC >Mature Secondary Structure TASISLVLFDMEGVLTHYDRATRAEHLAASTGRSTEQVRHAIWGSGLEARADAGEISDD CCEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCH EYLQALGQLLGCRVSRDDWLASRRASITPNAETLALAARLAGPYRIAILTNNCRLVTDHI HHHHHHHHHHCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCEEEEHHH AYLNPPVAQLFGQNVYPSAAFGATKPAAQAYLGCIGQLGCCAAQTLFIDDTAANVQGAVD HHCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHH AGLHGYRFVNAKSLAAEFASRSLI CCCCCEEEECHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA