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The map label for this gene is tnpR [H]

Identifier: 73542998

GI number: 73542998

Start: 3625222

End: 3625824

Strand: Direct

Name: tnpR [H]

Synonym: Reut_A3315

Alternate gene names: 73542998

Gene position: 3625222-3625824 (Clockwise)

Preceding gene: 73542997

Following gene: 73543002

Centisome position: 95.24

GC content: 58.37

Gene sequence:

>603_bases
ATGAAGCTGTATTACGGTCGTATCTCGACAACGGACGGCCAGACCTCCGCCACCCAGTACGAAGACGCAAAGCAGCATGG
CGTAGACCGTAAGCATGTCCACATCGATGAAGGCGTCTCTGGCTACCATGTTGCCCCTTCCGACCGTGCCGAGTGGAAGC
GGGTAGAGGACAAGCTGTCTAACGGCGGGGTCTTGTATGTGCGCTGGCTCGACCGTATCAGCCGCCGCTATGATGAGCTA
CACGCCACCATGCAGCGCCTTATGGCTATGGGTGTACGTGTTGAATGTACCCTCAATGGCATGGTGTTTGATGGTGCTGC
TACGGATGCTATCGCTAAGGCCACTCGTGACGCGGTGCTTGCCTTCATGGCCGCACAGGGGGAGGCTGATTACCTGAATC
GTCGTGAAATGCAGCGCCGTGGCATTGAACAGGCCAAGCGCACTAGCCCTGAGAAGTATGTCGGTCGTGCCCGTGCTGCT
GACGCTGAGTCCGTAGTGGCATGGCGTCGTGAGCATGGGGCAAGCATCGCAGCCACAGCAGAAGAGTTTGGTATCAGCCC
TGCCACAGTGAAACGCTACTGCGCCCAACAGGCCAGCGCCTGA

Upstream 100 bases:

>100_bases
CCATGCCAAAGAGCCACTTTACCTAGCTCATTAGGGTTGACTGTCAGTGAGCCAATAGCTAATATTGAGCCATAAACCCA
GTGAGCCAAGGAAAGACACC

Downstream 100 bases:

>100_bases
CACGTGCTAGGGCTAGGGACGCTCTATGAGGCTGTAGGGCGTCTTTGTGCTGAGGGTAGGGCAAGGCCACCCGGACGACG
ATGAGAGGCGCCTATCGATA

Product: resolvase, N-terminal:resolvase helix-turn-helix region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MKLYYGRISTTDGQTSATQYEDAKQHGVDRKHVHIDEGVSGYHVAPSDRAEWKRVEDKLSNGGVLYVRWLDRISRRYDEL
HATMQRLMAMGVRVECTLNGMVFDGAATDAIAKATRDAVLAFMAAQGEADYLNRREMQRRGIEQAKRTSPEKYVGRARAA
DAESVVAWRREHGASIAATAEEFGISPATVKRYCAQQASA

Sequences:

>Translated_200_residues
MKLYYGRISTTDGQTSATQYEDAKQHGVDRKHVHIDEGVSGYHVAPSDRAEWKRVEDKLSNGGVLYVRWLDRISRRYDEL
HATMQRLMAMGVRVECTLNGMVFDGAATDAIAKATRDAVLAFMAAQGEADYLNRREMQRRGIEQAKRTSPEKYVGRARAA
DAESVVAWRREHGASIAATAEEFGISPATVKRYCAQQASA
>Mature_200_residues
MKLYYGRISTTDGQTSATQYEDAKQHGVDRKHVHIDEGVSGYHVAPSDRAEWKRVEDKLSNGGVLYVRWLDRISRRYDEL
HATMQRLMAMGVRVECTLNGMVFDGAATDAIAKATRDAVLAFMAAQGEADYLNRREMQRRGIEQAKRTSPEKYVGRARAA
DAESVVAWRREHGASIAATAEEFGISPATVKRYCAQQASA

Specific function: Resolvase catalyzes the resolution (a site-specific recombination) of the cointegrated replicon to yield the final transposition products [H]

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the site-specific recombinase resolvase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR006118
- InterPro:   IPR006119
- InterPro:   IPR006120 [H]

Pfam domain/function: PF02796 HTH_7; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 22314; Mature: 22314

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLYYGRISTTDGQTSATQYEDAKQHGVDRKHVHIDEGVSGYHVAPSDRAEWKRVEDKLS
CEEEECCEECCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCEECCCCHHHHHHHHHHHC
NGGVLYVRWLDRISRRYDELHATMQRLMAMGVRVECTLNGMVFDGAATDAIAKATRDAVL
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEECCCHHHHHHHHHHHHHH
AFMAAQGEADYLNRREMQRRGIEQAKRTSPEKYVGRARAADAESVVAWRREHGASIAATA
HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHCCEEEEHH
EEFGISPATVKRYCAQQASA
HHHCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MKLYYGRISTTDGQTSATQYEDAKQHGVDRKHVHIDEGVSGYHVAPSDRAEWKRVEDKLS
CEEEECCEECCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCEECCCCHHHHHHHHHHHC
NGGVLYVRWLDRISRRYDELHATMQRLMAMGVRVECTLNGMVFDGAATDAIAKATRDAVL
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEECCCHHHHHHHHHHHHHH
AFMAAQGEADYLNRREMQRRGIEQAKRTSPEKYVGRARAADAESVVAWRREHGASIAATA
HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHCCEEEEHH
EEFGISPATVKRYCAQQASA
HHHCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3027041 [H]