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The map label for this gene is ydjI [H]

Identifier: 73542985

GI number: 73542985

Start: 3611267

End: 3612301

Strand: Reverse

Name: ydjI [H]

Synonym: Reut_A3302

Alternate gene names: 73542985

Gene position: 3612301-3611267 (Counterclockwise)

Preceding gene: 73542986

Following gene: 73542984

Centisome position: 94.9

GC content: 64.93

Gene sequence:

>1035_bases
ATGAGCATCGGTTCTTTCATCAAGAAGCAGTTCATCGACATCCTCCAGTGGACGGAGGACACGGACGGCGTGCTGGCCTG
GCGCTACCCGATGGAGGACATGGAAATCCAGTACGGCGGCAGCCTGACCGTACGCGAATCGCAGATGGCGGTGTTCGTCA
ACGAAGGCAAGATCGCCGACGTGTTCGGCCCCGGCATGTACAAGCTGACCACGCAGACGCTGCCGGTGCTGACCTACCTG
AAGAACTGGGACAAGTTGTTCGAATCGCCGTTCAAGTCGGATGTCTACTTCTTCAGCACGCGCCTGCAGATCGGCCGCAA
GTGGGGCACGCCGCAGCCGATCACGATCCGCGACGCGGACTTCGGCATGGTGCGGCTGCGCGCGTTCGGCCTGTACTCGT
ACAAAGTCGCCGATGCGGCGAAGTTCTACAGCGAGATCAGCGGCACGCGTGCTGAATACACGCGCGACGAGGTCGAAGAG
CAGTTGCGCAACCTGCTGATCGCCACCATGACGAATGCGCTCGGCGCGTCGTCGCTACCGTTCCTCGACATGGCGGCCAA
CCAGGCGCTGATGTCGCAGACTATTCGCGAGCGGCTGGCGCCCGAGTTCGAGCGCTATGGCGTGGCGCTGGACAATTTCG
CGGTCACCAATGTCTCGCTGCCCGAAGAACTGCAGAAGGCGATCGACACGCGCATCTCGATGGGCATGATGGGGGACATG
GCGAAGTACACCCAGTACCAGGTCGCCAGTTCGATCCCGCTGGCCGCGCAGAACGAAGGCGGCGTGGCGGGCCTCGGCGC
GAGCCTCGCCGCGGGTGCGGTGATGGGGCAGGCCATGGCCGGCGGACTGGCCGGCGCGGCGGGTGCGCCGGGCGTACCCG
CGCCTGCGGTGCCGCCTGCCGCGCCGCAAGCGGCAGCAGCGGATGACCCCACCGCGCGCCTGCAGAAGCTCAAGGAGCTG
CTCGACAAGAGCCTGATCACGCAGGCCGAATTCGACAGCGCCAAGGCCGAGATCCTCAAGAAGCTGGTCGGCTGA

Upstream 100 bases:

>100_bases
GGGCACCATCTCGGTCACCGTGGGCGCGATCAACGCGGCCTGCCTGTCCTGAAACGCGCCCGAATACCGGATCGCGCATC
CACGCAAGAGGAGACCTGAC

Downstream 100 bases:

>100_bases
CGGGGCTGCATGCAACAGGTCAACTGTCCTGGTTGCGGCGCGGAGGTCGCGTTCCGCTCCTCCGCAGCCGTCATGGCCGT
ATGCGAGTACTGCCATAGCA

Product: putative transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MSIGSFIKKQFIDILQWTEDTDGVLAWRYPMEDMEIQYGGSLTVRESQMAVFVNEGKIADVFGPGMYKLTTQTLPVLTYL
KNWDKLFESPFKSDVYFFSTRLQIGRKWGTPQPITIRDADFGMVRLRAFGLYSYKVADAAKFYSEISGTRAEYTRDEVEE
QLRNLLIATMTNALGASSLPFLDMAANQALMSQTIRERLAPEFERYGVALDNFAVTNVSLPEELQKAIDTRISMGMMGDM
AKYTQYQVASSIPLAAQNEGGVAGLGASLAAGAVMGQAMAGGLAGAAGAPGVPAPAVPPAAPQAAAADDPTARLQKLKEL
LDKSLITQAEFDSAKAEILKKLVG

Sequences:

>Translated_344_residues
MSIGSFIKKQFIDILQWTEDTDGVLAWRYPMEDMEIQYGGSLTVRESQMAVFVNEGKIADVFGPGMYKLTTQTLPVLTYL
KNWDKLFESPFKSDVYFFSTRLQIGRKWGTPQPITIRDADFGMVRLRAFGLYSYKVADAAKFYSEISGTRAEYTRDEVEE
QLRNLLIATMTNALGASSLPFLDMAANQALMSQTIRERLAPEFERYGVALDNFAVTNVSLPEELQKAIDTRISMGMMGDM
AKYTQYQVASSIPLAAQNEGGVAGLGASLAAGAVMGQAMAGGLAGAAGAPGVPAPAVPPAAPQAAAADDPTARLQKLKEL
LDKSLITQAEFDSAKAEILKKLVG
>Mature_343_residues
SIGSFIKKQFIDILQWTEDTDGVLAWRYPMEDMEIQYGGSLTVRESQMAVFVNEGKIADVFGPGMYKLTTQTLPVLTYLK
NWDKLFESPFKSDVYFFSTRLQIGRKWGTPQPITIRDADFGMVRLRAFGLYSYKVADAAKFYSEISGTRAEYTRDEVEEQ
LRNLLIATMTNALGASSLPFLDMAANQALMSQTIRERLAPEFERYGVALDNFAVTNVSLPEELQKAIDTRISMGMMGDMA
KYTQYQVASSIPLAAQNEGGVAGLGASLAAGAVMGQAMAGGLAGAAGAPGVPAPAVPPAAPQAAAADDPTARLQKLKELL
DKSLITQAEFDSAKAEILKKLVG

Specific function: Unknown

COG id: COG4260

COG function: function code S; Putative virion core protein (lumpy skin disease virus)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 37358; Mature: 37227

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIGSFIKKQFIDILQWTEDTDGVLAWRYPMEDMEIQYGGSLTVRESQMAVFVNEGKIAD
CCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEECCEEEEECCCEEEEEECCCEEE
VFGPGMYKLTTQTLPVLTYLKNWDKLFESPFKSDVYFFSTRLQIGRKWGTPQPITIRDAD
ECCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHCCCCCCCEEEECCC
FGMVRLRAFGLYSYKVADAAKFYSEISGTRAEYTRDEVEEQLRNLLIATMTNALGASSLP
CCEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
FLDMAANQALMSQTIRERLAPEFERYGVALDNFAVTNVSLPEELQKAIDTRISMGMMGDM
HHHHHHHHHHHHHHHHHHHCCHHHHHCCEECCEEEECCCCHHHHHHHHHHHHHHHHHHHH
AKYTQYQVASSIPLAAQNEGGVAGLGASLAAGAVMGQAMAGGLAGAAGAPGVPAPAVPPA
HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
APQAAAADDPTARLQKLKELLDKSLITQAEFDSAKAEILKKLVG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SIGSFIKKQFIDILQWTEDTDGVLAWRYPMEDMEIQYGGSLTVRESQMAVFVNEGKIAD
CHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEECCEEEEECCCEEEEEECCCEEE
VFGPGMYKLTTQTLPVLTYLKNWDKLFESPFKSDVYFFSTRLQIGRKWGTPQPITIRDAD
ECCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHCCCCCCCEEEECCC
FGMVRLRAFGLYSYKVADAAKFYSEISGTRAEYTRDEVEEQLRNLLIATMTNALGASSLP
CCEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
FLDMAANQALMSQTIRERLAPEFERYGVALDNFAVTNVSLPEELQKAIDTRISMGMMGDM
HHHHHHHHHHHHHHHHHHHCCHHHHHCCEECCEEEECCCCHHHHHHHHHHHHHHHHHHHH
AKYTQYQVASSIPLAAQNEGGVAGLGASLAAGAVMGQAMAGGLAGAAGAPGVPAPAVPPA
HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
APQAAAADDPTARLQKLKELLDKSLITQAEFDSAKAEILKKLVG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9455482; 9384377 [H]