| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is paaE [H]
Identifier: 73542894
GI number: 73542894
Start: 3522664
End: 3523752
Strand: Direct
Name: paaE [H]
Synonym: Reut_A3210
Alternate gene names: 73542894
Gene position: 3522664-3523752 (Clockwise)
Preceding gene: 73542893
Following gene: 73542895
Centisome position: 92.54
GC content: 67.22
Gene sequence:
>1089_bases ATGACCCCACAGTTCCATCCGCTGCGCGTGGCGCAGGTGCGCCCCGAGACGGCCGACACGATTTCCATCGCGTTCGAAGT GCCCGAGACCCTGCGCGACGCCTACCGCTTCACACAGGGGCAGTTCCTGACGCTGAAGGCCCCGGTCGATGGCCAGGACC TGCGCCGCTCGTACTCGATCTGCTGCGGCGTGCAGGACTATGCCGAGCGCGGTGAGCTGCGCGTGGCAGTAAAACTCGTC GAGGATGGCGTGTTTTCGAGCCACCTCCATGACACGCTGGCCCCGGGCCAGCTTATCGATGTGATGACGCCGGACGGCCG CTTCCATGTGCCGCTCGACGCGGGCGCGGCACGCCACTATGTCGCCTTTGCCGCGGGCAGCGGCATCACGCCGGTGCTGT CGCTGATCCGCACCGCGCTGGCGGCCGAACCGCAGAGCCGCTTCACGCTGGTCTATGGCAACCGCAATGTCGACAGCATC ATTTTTTCCGAAGCGCTCGAAGACCTGAAGAACCAGTACCTGTCGCGCTTCACGCTGTACCACGTGCTGTCGCGCCAGCC GCAGGAAGTCGACCTGCTGCACGGGCGCCTCGACCACGCCCGGGTCACGGCCTTCCTGCAGACGCTGATCCCGGTGGACG GCATCGATGCGGCGTTCGTGTGCGGACCGGCCTCGATGATCGACGAGGTCGAAACCGCGCTGCGCGATGCCGGGTTGGAT CCGCACCGCATCCACGCCGAGCGGTTCGGTGTGCCGGTGGACCGCCAAAAGCGCGCGCCCGCCCACGCCCATGCCGACGA CGCCGGCACGGCCGAGCTGGTCGTGGTGCTCGATGGCAAGCAGCACACCATGCGCCTGCCGATGGAGGACGGCAAAGTGC TCGACACGGCGCTGGCCGCCGGGCTGGACCTGCCCTATGCGTGCAAGGGCGGCGTGTGTTGCACCTGCCGGGCCAAGGTG CTGGAAGGCCAGGTCGAGATGGAAAAGAACTACACGCTGGAGCCGTGGGAAATGGAAAAGGGCTTCGTCCTGACCTGCCA GGCGCGCGCGCTCACGCCCCGCGTGGTGGTCAGCTACGACGAACGCTGA
Upstream 100 bases:
>100_bases GCCTGCAAGGCGCTTTACCGTTGCCTCGATTGCCGCGAACCGTTCGACTACTTCAAACCCTACTAACCGTTACCAACCCC GCCGTCCCGAGCGAGCTGCC
Downstream 100 bases:
>100_bases GCCGCCGCGCCAAACGTGCGCCGGGCCGCGCGCGGTGTCTGGCACGCCCGGCTGCCCAAGTCCCGCCGTGATTACAATGG GAAGGGAGCGCGTTGCGGAC
Product: phenylacetate-CoA oxygenase/reductase, PaaK subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 362; Mature: 361
Protein sequence:
>362_residues MTPQFHPLRVAQVRPETADTISIAFEVPETLRDAYRFTQGQFLTLKAPVDGQDLRRSYSICCGVQDYAERGELRVAVKLV EDGVFSSHLHDTLAPGQLIDVMTPDGRFHVPLDAGAARHYVAFAAGSGITPVLSLIRTALAAEPQSRFTLVYGNRNVDSI IFSEALEDLKNQYLSRFTLYHVLSRQPQEVDLLHGRLDHARVTAFLQTLIPVDGIDAAFVCGPASMIDEVETALRDAGLD PHRIHAERFGVPVDRQKRAPAHAHADDAGTAELVVVLDGKQHTMRLPMEDGKVLDTALAAGLDLPYACKGGVCCTCRAKV LEGQVEMEKNYTLEPWEMEKGFVLTCQARALTPRVVVSYDER
Sequences:
>Translated_362_residues MTPQFHPLRVAQVRPETADTISIAFEVPETLRDAYRFTQGQFLTLKAPVDGQDLRRSYSICCGVQDYAERGELRVAVKLV EDGVFSSHLHDTLAPGQLIDVMTPDGRFHVPLDAGAARHYVAFAAGSGITPVLSLIRTALAAEPQSRFTLVYGNRNVDSI IFSEALEDLKNQYLSRFTLYHVLSRQPQEVDLLHGRLDHARVTAFLQTLIPVDGIDAAFVCGPASMIDEVETALRDAGLD PHRIHAERFGVPVDRQKRAPAHAHADDAGTAELVVVLDGKQHTMRLPMEDGKVLDTALAAGLDLPYACKGGVCCTCRAKV LEGQVEMEKNYTLEPWEMEKGFVLTCQARALTPRVVVSYDER >Mature_361_residues TPQFHPLRVAQVRPETADTISIAFEVPETLRDAYRFTQGQFLTLKAPVDGQDLRRSYSICCGVQDYAERGELRVAVKLVE DGVFSSHLHDTLAPGQLIDVMTPDGRFHVPLDAGAARHYVAFAAGSGITPVLSLIRTALAAEPQSRFTLVYGNRNVDSII FSEALEDLKNQYLSRFTLYHVLSRQPQEVDLLHGRLDHARVTAFLQTLIPVDGIDAAFVCGPASMIDEVETALRDAGLDP HRIHAERFGVPVDRQKRAPAHAHADDAGTAELVVVLDGKQHTMRLPMEDGKVLDTALAAGLDLPYACKGGVCCTCRAKVL EGQVEMEKNYTLEPWEMEKGFVLTCQARALTPRVVVSYDER
Specific function: May be part of a multicomponent oxygenase involved in phenylacetyl-CoA hydroxylation [H]
COG id: COG1018
COG function: function code C; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding FR-type domain [H]
Homologues:
Organism=Escherichia coli, GI1787658, Length=358, Percent_Identity=46.927374301676, Blast_Score=319, Evalue=2e-88, Organism=Escherichia coli, GI1788104, Length=361, Percent_Identity=24.6537396121884, Blast_Score=72, Evalue=7e-14, Organism=Escherichia coli, GI1788903, Length=185, Percent_Identity=28.1081081081081, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR017927 - InterPro: IPR001041 - InterPro: IPR001709 - InterPro: IPR008333 - InterPro: IPR001433 - InterPro: IPR011884 - InterPro: IPR001221 - InterPro: IPR017938 [H]
Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 39932; Mature: 39801
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPQFHPLRVAQVRPETADTISIAFEVPETLRDAYRFTQGQFLTLKAPVDGQDLRRSYSI CCCCCCCEEEEEECCCCCCEEEEEEECCHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHH CCGVQDYAERGELRVAVKLVEDGVFSSHLHDTLAPGQLIDVMTPDGRFHVPLDAGAARHY EECCHHHHCCCCEEEEEEEECCCCHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCCCEE VAFAAGSGITPVLSLIRTALAAEPQSRFTLVYGNRNVDSIIFSEALEDLKNQYLSRFTLY EEEECCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH HVLSRQPQEVDLLHGRLDHARVTAFLQTLIPVDGIDAAFVCGPASMIDEVETALRDAGLD HHHCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHCCCC PHRIHAERFGVPVDRQKRAPAHAHADDAGTAELVVVLDGKQHTMRLPMEDGKVLDTALAA HHEEHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEECCCCCCCHHHHHHHH GLDLPYACKGGVCCTCRAKVLEGQVEMEKNYTLEPWEMEKGFVLTCQARALTPRVVVSYD CCCCCCCCCCCEEEEEEHHHHCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEC ER CC >Mature Secondary Structure TPQFHPLRVAQVRPETADTISIAFEVPETLRDAYRFTQGQFLTLKAPVDGQDLRRSYSI CCCCCCEEEEEECCCCCCEEEEEEECCHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHH CCGVQDYAERGELRVAVKLVEDGVFSSHLHDTLAPGQLIDVMTPDGRFHVPLDAGAARHY EECCHHHHCCCCEEEEEEEECCCCHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCCCEE VAFAAGSGITPVLSLIRTALAAEPQSRFTLVYGNRNVDSIIFSEALEDLKNQYLSRFTLY EEEECCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH HVLSRQPQEVDLLHGRLDHARVTAFLQTLIPVDGIDAAFVCGPASMIDEVETALRDAGLD HHHCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHCCCC PHRIHAERFGVPVDRQKRAPAHAHADDAGTAELVVVLDGKQHTMRLPMEDGKVLDTALAA HHEEHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEECCCCCCCHHHHHHHH GLDLPYACKGGVCCTCRAKVLEGQVEMEKNYTLEPWEMEKGFVLTCQARALTPRVVVSYD CCCCCCCCCCCEEEEEEHHHHCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEC ER CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: FAD [C]
Metal ions: Iron-Sulfur [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9748275; 9097039; 9278503; 10766858 [H]