| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is engD [H]
Identifier: 73542721
GI number: 73542721
Start: 3341751
End: 3342914
Strand: Direct
Name: engD [H]
Synonym: Reut_A3037
Alternate gene names: 73542721
Gene position: 3341751-3342914 (Clockwise)
Preceding gene: 73542715
Following gene: 73542725
Centisome position: 87.79
GC content: 63.83
Gene sequence:
>1164_bases ATGGCGCGGCGGGGCAAGGCCGAGAGCCCCCATCCGCTAGAATATGGGTTTTGCTATTTCCCGCCTGACACCATGAGCCT CCAATGCGGCATCGTCGGCCTGCCGAACGTCGGCAAGTCCACGCTGTTCAATGCCCTGACCAAGGCCGGCATCGCCGCCG AAAACTATCCGTTCTGCACCATCGAACCCAATGTGGGCGTGGTCGAAGTGCCGGATCCGAGGCTCGCCAAGCTGGCCGAG ATCGTCAAACCGGAGCGCATCCTGCCGGCCACGGTCGAGTTTGTCGACATCGCCGGCCTGGTGGCGGGCGCTTCCAAAGG GGAAGGCCTGGGCAACCAGTTCCTTGCCAACATCCGGGAATGCGACGCCATCACCCACGTGGTGCGCTGCTTCGAAGACG AGAACGTGATCCACGTGGCCGGCCGGGTCGATCCGCTGTCGGACATTGAAGTGATCAACACCGAACTGGCGCTGGCCGAC CTGGGCACAGTCGAGAAGGCGCTGGCCCGCTATATCAAGCCCGCCCGCGCCGGCGACAAGGAAGCCCAGCGTCTGGTCGC CGTGCTGGAAAAGGCACAAGCCGTGCTCGACCAGGCCAAGGCCGTGCGCACGCTCGACCTCGCGCCGGAAGAGTGGGATG CGATCCGCCCGTTCTGCCTGATCACCGCCAAGCCGACAATGTATGTCGCCAACGTGCGTGAAGACGGTTTCGAGAACAAC CCGCACCTGGACGCCGTGCGCGAGTACGCCAAGCAGACCAATTCCCCGGTCGTGGCCGTCTGCGCCGCCATCGAAGCGGA GATCGCCGACCTGGACGACGCCGACAAGGCCGAATTCCTGGCCGACCTCGGCATGGAAGAGCCTGGCCTGGACCGCGTGA TCCGCGCCGGCTTCAAGCTGCTGGGCCTGCAGACCTACTTCACGGCAGGCGTGAAGGAAGTTCGCGCCTGGACCATCCAC GTGGGCGACACGGCGCCGAAGGCTGCCGGCGTCATCCACACCGACTTCGAACGCGGCTTCATCCGCGCGCAGACGATTTC CTATGACGACTACATCGCCTTCAAGGGCGAGACTGGCGCGAAGGAAGCCGGCAAGATGCGGGCGGAAGGCAAGGAGTATG TGGTGAAGGATGGGGATGTGTTGAATTTCTTGTTCAACGTCTGA
Upstream 100 bases:
>100_bases CGACAACGGCGATCTGGAAAGCTGAGGAATTGCGGATGGACGCGTTGGATCGGGTCATGGCTGGATTATAGCCACCTCAC CCGCGCGGCCCCGGCGGCTC
Downstream 100 bases:
>100_bases TCTGCATCCCGCCCCAGTCGAGAAAGCCCGCAATCGCGGGCTTTCTTGCTTTCCGGGATCGGGAGAATCTACAGCTCTTC CATCCGCTCCCCTCTCAACC
Product: GTP-dependent nucleic acid-binding protein EngD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 387; Mature: 386
Protein sequence:
>387_residues MARRGKAESPHPLEYGFCYFPPDTMSLQCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDPRLAKLAE IVKPERILPATVEFVDIAGLVAGASKGEGLGNQFLANIRECDAITHVVRCFEDENVIHVAGRVDPLSDIEVINTELALAD LGTVEKALARYIKPARAGDKEAQRLVAVLEKAQAVLDQAKAVRTLDLAPEEWDAIRPFCLITAKPTMYVANVREDGFENN PHLDAVREYAKQTNSPVVAVCAAIEAEIADLDDADKAEFLADLGMEEPGLDRVIRAGFKLLGLQTYFTAGVKEVRAWTIH VGDTAPKAAGVIHTDFERGFIRAQTISYDDYIAFKGETGAKEAGKMRAEGKEYVVKDGDVLNFLFNV
Sequences:
>Translated_387_residues MARRGKAESPHPLEYGFCYFPPDTMSLQCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDPRLAKLAE IVKPERILPATVEFVDIAGLVAGASKGEGLGNQFLANIRECDAITHVVRCFEDENVIHVAGRVDPLSDIEVINTELALAD LGTVEKALARYIKPARAGDKEAQRLVAVLEKAQAVLDQAKAVRTLDLAPEEWDAIRPFCLITAKPTMYVANVREDGFENN PHLDAVREYAKQTNSPVVAVCAAIEAEIADLDDADKAEFLADLGMEEPGLDRVIRAGFKLLGLQTYFTAGVKEVRAWTIH VGDTAPKAAGVIHTDFERGFIRAQTISYDDYIAFKGETGAKEAGKMRAEGKEYVVKDGDVLNFLFNV >Mature_386_residues ARRGKAESPHPLEYGFCYFPPDTMSLQCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGVVEVPDPRLAKLAEI VKPERILPATVEFVDIAGLVAGASKGEGLGNQFLANIRECDAITHVVRCFEDENVIHVAGRVDPLSDIEVINTELALADL GTVEKALARYIKPARAGDKEAQRLVAVLEKAQAVLDQAKAVRTLDLAPEEWDAIRPFCLITAKPTMYVANVREDGFENNP HLDAVREYAKQTNSPVVAVCAAIEAEIADLDDADKAEFLADLGMEEPGLDRVIRAGFKLLGLQTYFTAGVKEVRAWTIHV GDTAPKAAGVIHTDFERGFIRAQTISYDDYIAFKGETGAKEAGKMRAEGKEYVVKDGDVLNFLFNV
Specific function: GTP-dependent nucleic acid-binding protein which may act as a translation factor [H]
COG id: COG0012
COG function: function code J; Predicted GTPase, probable translation factor
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI58761500, Length=369, Percent_Identity=42.8184281842818, Blast_Score=296, Evalue=2e-80, Organism=Homo sapiens, GI58761502, Length=218, Percent_Identity=36.2385321100917, Blast_Score=144, Evalue=1e-34, Organism=Escherichia coli, GI1787454, Length=363, Percent_Identity=71.900826446281, Blast_Score=537, Evalue=1e-154, Organism=Escherichia coli, GI1789574, Length=127, Percent_Identity=30.7086614173228, Blast_Score=67, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17509631, Length=366, Percent_Identity=41.2568306010929, Blast_Score=283, Evalue=8e-77, Organism=Caenorhabditis elegans, GI17552324, Length=197, Percent_Identity=26.9035532994924, Blast_Score=66, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6319499, Length=370, Percent_Identity=40, Blast_Score=249, Evalue=5e-67, Organism=Saccharomyces cerevisiae, GI6321773, Length=383, Percent_Identity=33.420365535248, Blast_Score=191, Evalue=1e-49, Organism=Saccharomyces cerevisiae, GI6321649, Length=207, Percent_Identity=34.7826086956522, Blast_Score=94, Evalue=3e-20, Organism=Drosophila melanogaster, GI24640873, Length=368, Percent_Identity=41.8478260869565, Blast_Score=291, Evalue=5e-79, Organism=Drosophila melanogaster, GI24640877, Length=368, Percent_Identity=41.8478260869565, Blast_Score=291, Evalue=5e-79, Organism=Drosophila melanogaster, GI24640875, Length=368, Percent_Identity=41.8478260869565, Blast_Score=291, Evalue=5e-79, Organism=Drosophila melanogaster, GI24640879, Length=326, Percent_Identity=39.2638036809816, Blast_Score=234, Evalue=9e-62, Organism=Drosophila melanogaster, GI24585318, Length=137, Percent_Identity=32.1167883211679, Blast_Score=70, Evalue=3e-12,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012675 - InterPro: IPR004396 - InterPro: IPR013029 - InterPro: IPR006073 - InterPro: IPR002917 - InterPro: IPR012676 - InterPro: IPR023192 [H]
Pfam domain/function: PF01926 MMR_HSR1; PF06071 YchF-GTPase_C [H]
EC number: NA
Molecular weight: Translated: 42047; Mature: 41916
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARRGKAESPHPLEYGFCYFPPDTMSLQCGIVGLPNVGKSTLFNALTKAGIAAENYPFCT CCCCCCCCCCCCCCCEEEECCCCCCEEEECEEECCCCCHHHHHHHHHHHCCCCCCCCEEE IEPNVGVVEVPDPRLAKLAEIVKPERILPATVEFVDIAGLVAGASKGEGLGNQFLANIRE ECCCCCEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH CDAITHVVRCFEDENVIHVAGRVDPLSDIEVINTELALADLGTVEKALARYIKPARAGDK HHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH EAQRLVAVLEKAQAVLDQAKAVRTLDLAPEEWDAIRPFCLITAKPTMYVANVREDGFENN HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEEEEECCCEEEEECHHCCCCCC PHLDAVREYAKQTNSPVVAVCAAIEAEIADLDDADKAEFLADLGMEEPGLDRVIRAGFKL CCHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHH LGLQTYFTAGVKEVRAWTIHVGDTAPKAAGVIHTDFERGFIRAQTISYDDYIAFKGETGA HHHHHHHHHHHHEEEEEEEEECCCCCCCCCEEEECCCCCEEEEEEECCCCEEEECCCCCC KEAGKMRAEGKEYVVKDGDVLNFLFNV HHHHHHHCCCCEEEEECCCHHHHHHCC >Mature Secondary Structure ARRGKAESPHPLEYGFCYFPPDTMSLQCGIVGLPNVGKSTLFNALTKAGIAAENYPFCT CCCCCCCCCCCCCCEEEECCCCCCEEEECEEECCCCCHHHHHHHHHHHCCCCCCCCEEE IEPNVGVVEVPDPRLAKLAEIVKPERILPATVEFVDIAGLVAGASKGEGLGNQFLANIRE ECCCCCEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH CDAITHVVRCFEDENVIHVAGRVDPLSDIEVINTELALADLGTVEKALARYIKPARAGDK HHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH EAQRLVAVLEKAQAVLDQAKAVRTLDLAPEEWDAIRPFCLITAKPTMYVANVREDGFENN HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEEEEECCCEEEEECHHCCCCCC PHLDAVREYAKQTNSPVVAVCAAIEAEIADLDDADKAEFLADLGMEEPGLDRVIRAGFKL CCHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHH LGLQTYFTAGVKEVRAWTIHVGDTAPKAAGVIHTDFERGFIRAQTISYDDYIAFKGETGA HHHHHHHHHHHHEEEEEEEEECCCCCCCCCEEEECCCCCEEEEEEECCCCEEEECCCCCC KEAGKMRAEGKEYVVKDGDVLNFLFNV HHHHHHHCCCCEEEEECCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]