| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is 73542406
Identifier: 73542406
GI number: 73542406
Start: 2987710
End: 2988687
Strand: Reverse
Name: 73542406
Synonym: Reut_A2721
Alternate gene names: NA
Gene position: 2988687-2987710 (Counterclockwise)
Preceding gene: 73542409
Following gene: 73542405
Centisome position: 78.51
GC content: 71.27
Gene sequence:
>978_bases ATGAGCCAAATTCTTACGAAACTGCAGCCAGTGCGCCGTCCGCGCCCAGCTATTCGTCTGGGCCGCCCGCGCCTGTTGAT CGTGGGGTGCGGGGATGTGGGGACGCGCTGCCTGCGAATCCTCTCGGCGCGCATGCGTATATTTGCCGTGACGTCGCAGC CGGAGCGCCGGGCGGAACTGCGTGCGGCCGGTGCGGTGCCGCTCGTCGCGAATCTCGACCGGCCAGCCACGCTTGCGCGC CTGCGCGGGCTGGCCAGCCGCGTGCTGGACCTGGCTCCGCCGCCCGGAACGGGCGAGGGCGATCCGCGCACACGCGCCTT GCTAGCCACCCTGCGCCGCACCGCGTGGCGCCGCAGCCGGGTGCATGCCGGCGAGCCCGTCATTCTACCCGACCGGCAAG GCACCCGCCCGGCCTTTGTCTATGCCAGCACTTCGGGCGTCTACGGCGACCGGGCTGGCGCGCGCGTGGCGGAATTCGCG CGCGTGCGCCCGGAAACGGCCCGCGCGCGTCGCCGCGTTGCGGCCGAACAGGCAGTGCGCAAGTTCGGCCGTAGTGGCGG CTGGCGCACCAGCATCGTGCGCATCCCCGGCATCTACGCCGAAGACCGCCTGCCGGTGGCGCGGCTCAAGCGCGGCACCC CGGCCCTCGCGCCCCAGGACGACGTCTACACCAGCCACATTCACGCCGACGATCTTGCGCGCACCATGATCGCCGCGCTG TTCCGCGGCCGGGCCCAGCGCATCGTCCACGCCAGCGACGACACCGAACTGCGCATGGCCGATTACTTCGACCTCGTGGC GGATCGCCGTGGCCTGCCGCGGCCGCCACGGATCACGCGCCAGCAAGCGCGGGAAGTGATCGACCCCACGCTGCTCAGCT TCATGAGCGAATCGCGCCGCCTCGACAACCGGCGCCTTAAACGCGAGCTGCGCCTGCGGCTGCGCTATCCGACCGTCGCT TCCTTCTTTGACGCCTGA
Upstream 100 bases:
>100_bases TGCTGTGGCGCAGGGCGGCGCCCAGGATGGTTTCATCGTCAGCCACTTCAAACTTGTGGCCGCTGGGCATTACGGTGACT TGATAAGCCATAATCGATCT
Downstream 100 bases:
>100_bases TCCGGGCGAGCGTTGCGCCGTGCCGTTTCAGGCACGGCGCTTGCATCCCCCACGCCGCGTCGACTCCTGTCTATACAGCA ACCGGTATTCCGCACCAATG
Product: NAD-dependent epimerase/dehydratase
Products: NA
Alternate protein names: Oxidoreductase Protein; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; Nucleoside-Diphosphate-Sugar Epimerases; Nucleoside-Diphosphate-Sugar Epimerase; Epimerase; NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase Family Protein
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MSQILTKLQPVRRPRPAIRLGRPRLLIVGCGDVGTRCLRILSARMRIFAVTSQPERRAELRAAGAVPLVANLDRPATLAR LRGLASRVLDLAPPPGTGEGDPRTRALLATLRRTAWRRSRVHAGEPVILPDRQGTRPAFVYASTSGVYGDRAGARVAEFA RVRPETARARRRVAAEQAVRKFGRSGGWRTSIVRIPGIYAEDRLPVARLKRGTPALAPQDDVYTSHIHADDLARTMIAAL FRGRAQRIVHASDDTELRMADYFDLVADRRGLPRPPRITRQQAREVIDPTLLSFMSESRRLDNRRLKRELRLRLRYPTVA SFFDA
Sequences:
>Translated_325_residues MSQILTKLQPVRRPRPAIRLGRPRLLIVGCGDVGTRCLRILSARMRIFAVTSQPERRAELRAAGAVPLVANLDRPATLAR LRGLASRVLDLAPPPGTGEGDPRTRALLATLRRTAWRRSRVHAGEPVILPDRQGTRPAFVYASTSGVYGDRAGARVAEFA RVRPETARARRRVAAEQAVRKFGRSGGWRTSIVRIPGIYAEDRLPVARLKRGTPALAPQDDVYTSHIHADDLARTMIAAL FRGRAQRIVHASDDTELRMADYFDLVADRRGLPRPPRITRQQAREVIDPTLLSFMSESRRLDNRRLKRELRLRLRYPTVA SFFDA >Mature_324_residues SQILTKLQPVRRPRPAIRLGRPRLLIVGCGDVGTRCLRILSARMRIFAVTSQPERRAELRAAGAVPLVANLDRPATLARL RGLASRVLDLAPPPGTGEGDPRTRALLATLRRTAWRRSRVHAGEPVILPDRQGTRPAFVYASTSGVYGDRAGARVAEFAR VRPETARARRRVAAEQAVRKFGRSGGWRTSIVRIPGIYAEDRLPVARLKRGTPALAPQDDVYTSHIHADDLARTMIAALF RGRAQRIVHASDDTELRMADYFDLVADRRGLPRPPRITRQQAREVIDPTLLSFMSESRRLDNRRLKRELRLRLRYPTVAS FFDA
Specific function: Unknown
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36461; Mature: 36330
Theoretical pI: Translated: 12.21; Mature: 12.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQILTKLQPVRRPRPAIRLGRPRLLIVGCGDVGTRCLRILSARMRIFAVTSQPERRAEL CHHHHHHHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHEEEECCCCHHHHHH RAAGAVPLVANLDRPATLARLRGLASRVLDLAPPPGTGEGDPRTRALLATLRRTAWRRSR HHCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH VHAGEPVILPDRQGTRPAFVYASTSGVYGDRAGARVAEFARVRPETARARRRVAAEQAVR CCCCCCEEECCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH KFGRSGGWRTSIVRIPGIYAEDRLPVARLKRGTPALAPQDDVYTSHIHADDLARTMIAAL HHCCCCCCEEEEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHH FRGRAQRIVHASDDTELRMADYFDLVADRRGLPRPPRITRQQAREVIDPTLLSFMSESRR HHHHHHHEEECCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LDNRRLKRELRLRLRYPTVASFFDA HHHHHHHHHHHHHHCCCHHHHHHCC >Mature Secondary Structure SQILTKLQPVRRPRPAIRLGRPRLLIVGCGDVGTRCLRILSARMRIFAVTSQPERRAEL HHHHHHHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHEEEECCCCHHHHHH RAAGAVPLVANLDRPATLARLRGLASRVLDLAPPPGTGEGDPRTRALLATLRRTAWRRSR HHCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH VHAGEPVILPDRQGTRPAFVYASTSGVYGDRAGARVAEFARVRPETARARRRVAAEQAVR CCCCCCEEECCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH KFGRSGGWRTSIVRIPGIYAEDRLPVARLKRGTPALAPQDDVYTSHIHADDLARTMIAAL HHCCCCCCEEEEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHH FRGRAQRIVHASDDTELRMADYFDLVADRRGLPRPPRITRQQAREVIDPTLLSFMSESRR HHHHHHHEEECCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LDNRRLKRELRLRLRYPTVASFFDA HHHHHHHHHHHHHHCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA