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The map label for this gene is arcB [H]

Identifier: 73542356

GI number: 73542356

Start: 2934761

End: 2935840

Strand: Reverse

Name: arcB [H]

Synonym: Reut_A2671

Alternate gene names: 73542356

Gene position: 2935840-2934761 (Counterclockwise)

Preceding gene: 73542357

Following gene: 73542350

Centisome position: 77.13

GC content: 68.15

Gene sequence:

>1080_bases
ATGAAAGACACCGCCATGACGCGCTTCCTTGATGCCACCGACGTTGCCCGACTGGTCGGCGCCATCGGGGTTCCCGTTGC
CATCATGCAACTGGCCGACCACGTGCGGCAGGATTTCCTGCGCTGGGAGCAGTTCGAGAAATCGGCCCGGCTGGCCAGCC
ATTCGCCAGTCGGCGTGATCGAGCTGATGCCGGTGACCGACGGCGTGCAGTACGCGTTCAAGTACGTCAACGGCCATCCG
CGTAACGCGCGCGTCTCGATGCCTACGGTGATGGCCTGCGGCATGCTGGCTGAGGTCGAGACCGGTTTCCCGCTGATGCT
GACGGACCTGACGCTGGCCACGGCGCTGCGCACGGCGGCTACCTCCGCGCTCGCGGCGCGCGCCATGGCGCGGCCCGACA
GTGCGGTGATGGCGCTGATCGGCAACGGCGCGCAGGCAGAGTTCCAGGCGCTGGCGTTCCACGCCCTGCTTGGCGTGCGC
GAAGTCCGCGCCTACGACATCGACCCCGAAGCCACGGCACGGCTCGCGCGCAACCTTGCGGGCGTGCCGGACTTGTCCAT
CGTCGCGGTGGAGACCGTGCACGCCGCGCTGGCCGGTGCGGACATCGTCTCGACCGTGACCGCCGACAAGACGCGCGCGA
CCATCCTGACACCGGACATGGTGCGGCCGGGCGTGCACCTGAACGCCGTGGGCGGCGACTGTCCGGGCAAAACCGAGCTG
CATCCGGACATCCTGCGCAAGGCACGCATCGTGGTGGAATACGAACCGCAGACGCGGCTCGAAGGCGAGATCCAGCAGCT
CGGATCCGATACGCCGGTCACCGAGCTCTGGCAGGTGCTGTCAGGCCGGATACCCGGGCGCGCGGCCGCGGACGAGGTGA
CGATTTTCGATTCCGTCGGGTTTGCGCTAGAAGATTATTCGGCGCTGCGCTGGCTGTACGCCGCGGCGCGGGCTCGCCAT
GCCGGCCGGCATGTGGAACTGGTAGCGATGCCGCCGGATCCGCGCAACCTGTTTGGCTGGATGATGGAAGCGCAGCAGGT
GCCGCACGCGACGGCATCGCACGAAGCGGCGCTGGCCTGA

Upstream 100 bases:

>100_bases
GCCTATTGCATGACCTTGCGACTGGACCGCAGCAGCGGCGCCTCGACCAGGGCCCCGACTGCTCGCGCCGCAGCATGATC
GGCCGCTACAGGAGTCCACC

Downstream 100 bases:

>100_bases
CCGCGCTGCCGGCTATGCAACAGGAACGGGCCGTGTTCAACCGGCCCGGCCCATCATGAGTTGCGCGCGCAGGAAACCCT
TGACCTCCTCAAGCGACGGC

Product: ornithine cyclodeaminase

Products: NA

Alternate protein names: OCD [H]

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MKDTAMTRFLDATDVARLVGAIGVPVAIMQLADHVRQDFLRWEQFEKSARLASHSPVGVIELMPVTDGVQYAFKYVNGHP
RNARVSMPTVMACGMLAEVETGFPLMLTDLTLATALRTAATSALAARAMARPDSAVMALIGNGAQAEFQALAFHALLGVR
EVRAYDIDPEATARLARNLAGVPDLSIVAVETVHAALAGADIVSTVTADKTRATILTPDMVRPGVHLNAVGGDCPGKTEL
HPDILRKARIVVEYEPQTRLEGEIQQLGSDTPVTELWQVLSGRIPGRAAADEVTIFDSVGFALEDYSALRWLYAAARARH
AGRHVELVAMPPDPRNLFGWMMEAQQVPHATASHEAALA

Sequences:

>Translated_359_residues
MKDTAMTRFLDATDVARLVGAIGVPVAIMQLADHVRQDFLRWEQFEKSARLASHSPVGVIELMPVTDGVQYAFKYVNGHP
RNARVSMPTVMACGMLAEVETGFPLMLTDLTLATALRTAATSALAARAMARPDSAVMALIGNGAQAEFQALAFHALLGVR
EVRAYDIDPEATARLARNLAGVPDLSIVAVETVHAALAGADIVSTVTADKTRATILTPDMVRPGVHLNAVGGDCPGKTEL
HPDILRKARIVVEYEPQTRLEGEIQQLGSDTPVTELWQVLSGRIPGRAAADEVTIFDSVGFALEDYSALRWLYAAARARH
AGRHVELVAMPPDPRNLFGWMMEAQQVPHATASHEAALA
>Mature_359_residues
MKDTAMTRFLDATDVARLVGAIGVPVAIMQLADHVRQDFLRWEQFEKSARLASHSPVGVIELMPVTDGVQYAFKYVNGHP
RNARVSMPTVMACGMLAEVETGFPLMLTDLTLATALRTAATSALAARAMARPDSAVMALIGNGAQAEFQALAFHALLGVR
EVRAYDIDPEATARLARNLAGVPDLSIVAVETVHAALAGADIVSTVTADKTRATILTPDMVRPGVHLNAVGGDCPGKTEL
HPDILRKARIVVEYEPQTRLEGEIQQLGSDTPVTELWQVLSGRIPGRAAADEVTIFDSVGFALEDYSALRWLYAAARARH
AGRHVELVAMPPDPRNLFGWMMEAQQVPHATASHEAALA

Specific function: Unknown

COG id: COG2423

COG function: function code E; Predicted ornithine cyclodeaminase, mu-crystallin homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ornithine cyclodeaminase family [H]

Homologues:

Organism=Homo sapiens, GI62241008, Length=228, Percent_Identity=31.5789473684211, Blast_Score=99, Evalue=5e-21,
Organism=Homo sapiens, GI4503065, Length=228, Percent_Identity=31.5789473684211, Blast_Score=99, Evalue=6e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003462 [H]

Pfam domain/function: PF02423 OCD_Mu_crystall [H]

EC number: =4.3.1.12 [H]

Molecular weight: Translated: 38626; Mature: 38626

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDTAMTRFLDATDVARLVGAIGVPVAIMQLADHVRQDFLRWEQFEKSARLASHSPVGVI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
ELMPVTDGVQYAFKYVNGHPRNARVSMPTVMACGMLAEVETGFPLMLTDLTLATALRTAA
EEEECCCHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
TSALAARAMARPDSAVMALIGNGAQAEFQALAFHALLGVREVRAYDIDPEATARLARNLA
HHHHHHHHHCCCCHHEEEEECCCCHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHC
GVPDLSIVAVETVHAALAGADIVSTVTADKTRATILTPDMVRPGVHLNAVGGDCPGKTEL
CCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHCCCCEEEECCCCCCCCCCC
HPDILRKARIVVEYEPQTRLEGEIQQLGSDTPVTELWQVLSGRIPGRAAADEVTIFDSVG
CHHHHHHCEEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEHHCC
FALEDYSALRWLYAAARARHAGRHVELVAMPPDPRNLFGWMMEAQQVPHATASHEAALA
HHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHCC
>Mature Secondary Structure
MKDTAMTRFLDATDVARLVGAIGVPVAIMQLADHVRQDFLRWEQFEKSARLASHSPVGVI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
ELMPVTDGVQYAFKYVNGHPRNARVSMPTVMACGMLAEVETGFPLMLTDLTLATALRTAA
EEEECCCHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
TSALAARAMARPDSAVMALIGNGAQAEFQALAFHALLGVREVRAYDIDPEATARLARNLA
HHHHHHHHHCCCCHHEEEEECCCCHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHC
GVPDLSIVAVETVHAALAGADIVSTVTADKTRATILTPDMVRPGVHLNAVGGDCPGKTEL
CCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHCCCCEEEECCCCCCCCCCC
HPDILRKARIVVEYEPQTRLEGEIQQLGSDTPVTELWQVLSGRIPGRAAADEVTIFDSVG
CHHHHHHCEEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEHHCC
FALEDYSALRWLYAAARARHAGRHVELVAMPPDPRNLFGWMMEAQQVPHATASHEAALA
HHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9375792 [H]