| Definition | Ralstonia eutropha JMP134 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007347 |
| Length | 3,806,533 |
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The map label for this gene is groEL [H]
Identifier: 73542341
GI number: 73542341
Start: 2914154
End: 2915797
Strand: Reverse
Name: groEL [H]
Synonym: Reut_A2656
Alternate gene names: 73542341
Gene position: 2915797-2914154 (Counterclockwise)
Preceding gene: 73542342
Following gene: 73542340
Centisome position: 76.6
GC content: 62.9
Gene sequence:
>1644_bases ATGGCAGCAAAAGACGTAGTATTTGGCGACGCCGCCCGTGCCAAGATGGTCGAAGGCGTGAACATTCTCGCCAACGCAGT GAAGGTTACCCTGGGTCCGAAGGGCCGCAACGTGGTGCTGGAGCGCAGCTTCGGCGGCCCGACCGTGACCAAGGACGGCG TGTCCGTGGCCAAGGAAATCGAGCTGAAGGACAAGCTGCAGAACATGGGCGCCCAGATGGTCAAGGAAGTGGCTTCCAAG ACCAGCGACAACGCCGGTGACGGTACCACCACCGCTACCGTTCTGGCCCAGTCGATCGTGCGCGAAGGCATGAAGTTCGT CGCCGCCGGCATGAACCCGATGGACCTGAAGCGCGGTATCGACAAGGCTGTCGCCGCCGCCGTGGAAGAGCTGAAGAAGG TCAGCAAGCCGACCACCACCAGCAAGGAAATCGCCCAGGTTGGCGCGATCTCGGCCAACAGCGACACCTCGATCGGTGAG CGCATTGCCGAAGCCATGGACAAGGTCGGCAAGGAAGGCGTGATCACCGTCGAAGACGGCAAGTCGCTGGCCGACGAGCT GGAAGTCGTGGAAGGCATGCAGTTCGACCGCGGCTACCTGTCGCCGTACTTCATCAACAACCCCGAAAAGCAAGTTGTCC AGCTGGACAGCCCGTTCGTGCTGCTGTTCGACAAGAAGGTTTCGAACATCCGCGACCTGCTGCCGGTGCTGGAGCAAGTG GCCAAGGCTGGCCGCCCGCTGCTGATCATTGCTGAAGACGTCGAGGGCGAAGCCCTGGCGACCCTGGTGGTCAACAACAT CCGTGGCATCCTGAAGACCGCCGCCGTCAAGGCTCCGGGCTTCGGCGACCGCCGCAAGGCCATGCTGGAAGACATCGCCA TCCTGACCGGCGGCACCGTCATCGCTGAAGAAATCGGCCTGACGCTGGAAAAGGCGACCCTGAACGACCTGGGCCAAGCC AAGCGCATCGAAATCGGCAAGGAAAACACCATCATCATCGACGGCGCCGGCGACGCAGCTGCGATCGAAGGCCGCGTGAA GCAGATCCGTGCCCAGATCGAAGAAGCGACCTCGGACTACGACCGTGAAAAGCTGCAAGAGCGCGTGGCCAAGCTGGCCG GCGGTGTTGCCGTGATCAAGGTTGGCGCTGCCACCGAAGTCGAAATGAAGGAAAAGAAGGCCCGCGTGGAAGACGCCCTG CACGCCACCCGCGCTGCGGTGGAAGAAGGCATCGTCCCCGGCGGCGGTGTGGCCCTGCTGCGTGCCCGCGCTGCGATCTC GGCACTGACCGGTGAAAACCCGGACCAGAACGCCGGTATCAAGATCGTGCTGCGCGCCATGGAAGAGCCGCTGCGCCAGA TCGTGCTGAACGCTGGTGAAGAAGCTTCGGTCGTCGTTGCCAAGGTCATCGAAGGCAAGGGCAACTACGGCTACAACGCG GCTTCGGGCGAGTACGGCGACCTGGTGGAAATGGGCGTGCTGGATCCGACCAAGGTTACCCGCACCGCACTGCAGAACGC CGCTTCGGTGGCATCGCTGATGCTGACCACGGACTGCGCAGTTGCCGAAACGCCGAAGGAAGAGTCGGCTCCGGCAATGC CGGGCGGCATGGGCGGCATGGGCGGCATGGAAGGCATGATGTAA
Upstream 100 bases:
>100_bases CAGGAACTGCTGGTCATGCGCGAAGAAGACATCATGGCCGTGGTGAACAAGTAATCACTTGTTGACGACTAGCACCGTAC CGAATTAGGAGAATCAGAAC
Downstream 100 bases:
>100_bases ATCAGGCCGACCGATTGCCGACTGCCTTAACGGGCAGGCTGTCTGAAAAAACCCCCGCAAGCGCGAGCTTGCGGGGGTTT TTGCTTGTAGCTGTGCCGGA
Product: chaperonin GroEL
Products: NA
Alternate protein names: GroEL protein; Protein Cpn60 [H]
Number of amino acids: Translated: 547; Mature: 546
Protein sequence:
>547_residues MAAKDVVFGDAARAKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEIELKDKLQNMGAQMVKEVASK TSDNAGDGTTTATVLAQSIVREGMKFVAAGMNPMDLKRGIDKAVAAAVEELKKVSKPTTTSKEIAQVGAISANSDTSIGE RIAEAMDKVGKEGVITVEDGKSLADELEVVEGMQFDRGYLSPYFINNPEKQVVQLDSPFVLLFDKKVSNIRDLLPVLEQV AKAGRPLLIIAEDVEGEALATLVVNNIRGILKTAAVKAPGFGDRRKAMLEDIAILTGGTVIAEEIGLTLEKATLNDLGQA KRIEIGKENTIIIDGAGDAAAIEGRVKQIRAQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDAL HATRAAVEEGIVPGGGVALLRARAAISALTGENPDQNAGIKIVLRAMEEPLRQIVLNAGEEASVVVAKVIEGKGNYGYNA ASGEYGDLVEMGVLDPTKVTRTALQNAASVASLMLTTDCAVAETPKEESAPAMPGGMGGMGGMEGMM
Sequences:
>Translated_547_residues MAAKDVVFGDAARAKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEIELKDKLQNMGAQMVKEVASK TSDNAGDGTTTATVLAQSIVREGMKFVAAGMNPMDLKRGIDKAVAAAVEELKKVSKPTTTSKEIAQVGAISANSDTSIGE RIAEAMDKVGKEGVITVEDGKSLADELEVVEGMQFDRGYLSPYFINNPEKQVVQLDSPFVLLFDKKVSNIRDLLPVLEQV AKAGRPLLIIAEDVEGEALATLVVNNIRGILKTAAVKAPGFGDRRKAMLEDIAILTGGTVIAEEIGLTLEKATLNDLGQA KRIEIGKENTIIIDGAGDAAAIEGRVKQIRAQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDAL HATRAAVEEGIVPGGGVALLRARAAISALTGENPDQNAGIKIVLRAMEEPLRQIVLNAGEEASVVVAKVIEGKGNYGYNA ASGEYGDLVEMGVLDPTKVTRTALQNAASVASLMLTTDCAVAETPKEESAPAMPGGMGGMGGMEGMM >Mature_546_residues AAKDVVFGDAARAKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEIELKDKLQNMGAQMVKEVASKT SDNAGDGTTTATVLAQSIVREGMKFVAAGMNPMDLKRGIDKAVAAAVEELKKVSKPTTTSKEIAQVGAISANSDTSIGER IAEAMDKVGKEGVITVEDGKSLADELEVVEGMQFDRGYLSPYFINNPEKQVVQLDSPFVLLFDKKVSNIRDLLPVLEQVA KAGRPLLIIAEDVEGEALATLVVNNIRGILKTAAVKAPGFGDRRKAMLEDIAILTGGTVIAEEIGLTLEKATLNDLGQAK RIEIGKENTIIIDGAGDAAAIEGRVKQIRAQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALH ATRAAVEEGIVPGGGVALLRARAAISALTGENPDQNAGIKIVLRAMEEPLRQIVLNAGEEASVVVAKVIEGKGNYGYNAA SGEYGDLVEMGVLDPTKVTRTALQNAASVASLMLTTDCAVAETPKEESAPAMPGGMGGMGGMEGMM
Specific function: Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions [H]
COG id: COG0459
COG function: function code O; Chaperonin GroEL (HSP60 family)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chaperonin (HSP60) family [H]
Homologues:
Organism=Homo sapiens, GI41399285, Length=530, Percent_Identity=54.1509433962264, Blast_Score=560, Evalue=1e-159, Organism=Homo sapiens, GI31542947, Length=530, Percent_Identity=54.1509433962264, Blast_Score=560, Evalue=1e-159, Organism=Homo sapiens, GI24307939, Length=462, Percent_Identity=23.8095238095238, Blast_Score=70, Evalue=4e-12, Organism=Homo sapiens, GI5453607, Length=538, Percent_Identity=21.1895910780669, Blast_Score=69, Evalue=1e-11, Organism=Escherichia coli, GI1790586, Length=530, Percent_Identity=77.1698113207547, Blast_Score=814, Evalue=0.0, Organism=Caenorhabditis elegans, GI17555558, Length=530, Percent_Identity=53.9622641509434, Blast_Score=560, Evalue=1e-160, Organism=Caenorhabditis elegans, GI193210679, Length=212, Percent_Identity=53.3018867924528, Blast_Score=220, Evalue=2e-57, Organism=Caenorhabditis elegans, GI25147750, Length=131, Percent_Identity=34.3511450381679, Blast_Score=65, Evalue=8e-11, Organism=Caenorhabditis elegans, GI17532603, Length=573, Percent_Identity=21.6404886561955, Blast_Score=65, Evalue=8e-11, Organism=Saccharomyces cerevisiae, GI6323288, Length=526, Percent_Identity=53.4220532319392, Blast_Score=557, Evalue=1e-159, Organism=Saccharomyces cerevisiae, GI6322446, Length=574, Percent_Identity=22.4738675958188, Blast_Score=76, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6322524, Length=556, Percent_Identity=21.4028776978417, Blast_Score=72, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6322350, Length=574, Percent_Identity=22.1254355400697, Blast_Score=68, Evalue=4e-12, Organism=Drosophila melanogaster, GI24641193, Length=527, Percent_Identity=53.7001897533207, Blast_Score=563, Evalue=1e-160, Organism=Drosophila melanogaster, GI24641191, Length=527, Percent_Identity=53.7001897533207, Blast_Score=563, Evalue=1e-160, Organism=Drosophila melanogaster, GI45550936, Length=527, Percent_Identity=51.6129032258064, Blast_Score=545, Evalue=1e-155, Organism=Drosophila melanogaster, GI45550132, Length=527, Percent_Identity=51.6129032258064, Blast_Score=545, Evalue=1e-155, Organism=Drosophila melanogaster, GI45550935, Length=527, Percent_Identity=51.6129032258064, Blast_Score=545, Evalue=1e-155, Organism=Drosophila melanogaster, GI17864606, Length=542, Percent_Identity=45.5719557195572, Blast_Score=479, Evalue=1e-135, Organism=Drosophila melanogaster, GI24584129, Length=532, Percent_Identity=37.0300751879699, Blast_Score=344, Evalue=7e-95, Organism=Drosophila melanogaster, GI19921262, Length=532, Percent_Identity=37.0300751879699, Blast_Score=344, Evalue=7e-95,
Paralogues:
None
Copy number: 2180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 360 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 480 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 15012 Molecules/Cell In: Growth Phase,
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018370 - InterPro: IPR001844 - InterPro: IPR002423 [H]
Pfam domain/function: PF00118 Cpn60_TCP1 [H]
EC number: NA
Molecular weight: Translated: 57387; Mature: 57256
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: PS00284 SERPIN ; PS00296 CHAPERONINS_CPN60
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAKDVVFGDAARAKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEI CCCCCCEECCHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHH ELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQSIVREGMKFVAAGMNPMDLKRGI HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH DKAVAAAVEELKKVSKPTTTSKEIAQVGAISANSDTSIGERIAEAMDKVGKEGVITVEDG HHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCC KSLADELEVVEGMQFDRGYLSPYFINNPEKQVVQLDSPFVLLFDKKVSNIRDLLPVLEQV HHHHHHHHHHHCCCCCCCCCCCEEECCCHHHEEEECCCEEEEECCHHHHHHHHHHHHHHH AKAGRPLLIIAEDVEGEALATLVVNNIRGILKTAAVKAPGFGDRRKAMLEDIAILTGGTV HHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHH IAEEIGLTLEKATLNDLGQAKRIEIGKENTIIIDGAGDAAAIEGRVKQIRAQIEEATSDY HHHHHCCEEEHHHHHHCCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALL HHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH RARAAISALTGENPDQNAGIKIVLRAMEEPLRQIVLNAGEEASVVVAKVIEGKGNYGYNA HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCC ASGEYGDLVEMGVLDPTKVTRTALQNAASVASLMLTTDCAVAETPKEESAPAMPGGMGGM CCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCC GGMEGMM CCCCCCC >Mature Secondary Structure AAKDVVFGDAARAKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEI CCCCCEECCHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHH ELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQSIVREGMKFVAAGMNPMDLKRGI HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH DKAVAAAVEELKKVSKPTTTSKEIAQVGAISANSDTSIGERIAEAMDKVGKEGVITVEDG HHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCC KSLADELEVVEGMQFDRGYLSPYFINNPEKQVVQLDSPFVLLFDKKVSNIRDLLPVLEQV HHHHHHHHHHHCCCCCCCCCCCEEECCCHHHEEEECCCEEEEECCHHHHHHHHHHHHHHH AKAGRPLLIIAEDVEGEALATLVVNNIRGILKTAAVKAPGFGDRRKAMLEDIAILTGGTV HHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHH IAEEIGLTLEKATLNDLGQAKRIEIGKENTIIIDGAGDAAAIEGRVKQIRAQIEEATSDY HHHHHCCEEEHHHHHHCCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALL HHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH RARAAISALTGENPDQNAGIKIVLRAMEEPLRQIVLNAGEEASVVVAKVIEGKGNYGYNA HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCC ASGEYGDLVEMGVLDPTKVTRTALQNAASVASLMLTTDCAVAETPKEESAPAMPGGMGGM CCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCC GGMEGMM CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA